Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_020835.1
Length=47325
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 553 5e-153
seq7678 221 4e-53
>seq8857
Length=8770
Score = 553 bits (612), Expect = 5e-153
Identities = 720/989 (73%), Gaps = 10/989 (1%)
Strand=Plus/Plus
Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893
||||| ||||| |||||||||||||||||||| || ||||||||||| | ||||||||
Sbjct 5447 AGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 5506
Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCT---CCAGCTGCTACAAT 17950
||| | ||| | | ||||| || ||| | || | ||| | | | |||||
Sbjct 5507 AGCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACA-- 5564
Query 17951 GGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 18010
||||| ||||| ||||| ||||| | ||| ||||||||||| || || | || ||
Sbjct 5565 -GATTGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGT 5623
Query 18011 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTT 18070
|| ||| || | | |||||||||||||| ||||||||||||| | | |||||
Sbjct 5624 AAACCAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTT 5683
Query 18071 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATA 18130
|| || ||||| |||||||| | || ||||| || |||||||| || |||||||||||
Sbjct 5684 GAAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATA 5743
Query 18131 CGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTC 18190
|| ||||| ||||| || ||||| || || | || ||| ||| || || |||||
Sbjct 5744 AGTTTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTC 5803
Query 18191 TCTAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAA 18250
|| || | ||||| || | || ||||||||| |||| | ||||| ||
Sbjct 5804 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAA 5863
Query 18251 TACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAA 18310
||| || || ||||| | ||| || || || ||||||||||| |||||||| || |||||
Sbjct 5864 TACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAA 5923
Query 18311 TACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCC 18370
||| | ||| || ||||||||||| ||| || ||||||||||||||||| || || ||
Sbjct 5924 TACAATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCC 5983
Query 18371 TTGTCCAAAAGGATAAA-CGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAATAA 18428
||| |||| || |||| | ||||| || | || | |||||||| || || || |||||
Sbjct 5984 TTGACCAATTGGGTAAATCAAGAAA-ACAGCAGTA-GCAGCTGCAACAGGAGCTGAATAC 6041
Query 18429 GCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATG 18488
|||||| |||||| ||||||||||| || | |||| |||||||| | || ||||||
Sbjct 6042 GCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATG 6101
Query 18489 TAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATAT 18548
||| || | || | | ||||| | ||||| || | ||| || || || || |||
Sbjct 6102 TAACAAGCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTAT 6161
Query 18549 AACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTA 18608
||||| || || | | ||| |||||||| ||||| || ||||| | |||||| || |
Sbjct 6162 AACCATTCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCA 6221
Query 18609 GATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACA 18668
|| | || | || || || || || || |||||||| || || || | ||| || |||
Sbjct 6222 GAAGTAGGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACA 6281
Query 18669 GGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCT 18728
|| |||||||||||||| || || || ||||||||||||| || || || | |||| |
Sbjct 6282 GGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACA 6341
Query 18729 GTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGG 18788
| || |||||| || | | ||||||||| | || |||||||| || | ||| ||||||
Sbjct 6342 GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGG 6401
Query 18789 TTGTTTGTACTCGTAACCCAGTCACATAA 18817
|| | || || || | ||||| ||| ||
Sbjct 6402 TTTTCAGTGCTGGTTATCCAGTTACAGAA 6430
>seq7678
Length=557
Score = 221 bits (244), Expect = 4e-53
Identities = 278/379 (73%), Gaps = 2/379 (1%)
Strand=Plus/Plus
Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893
||| || |||| |||||||| ||||| |||||||||||||| ||||| | || | |||
Sbjct 162 AGCCAAGTCTAAGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAAGTT 221
Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953
||| | ||||| |||||||||||| |||| | ||| | ||| || | | | ||
Sbjct 222 AGCGCGGTTGATTACGTCAGCCCAAGTAGCGATGACGCGACCTTGAGAATCGATTACTGA 281
Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013
|||||||||||||||||| || || || || ||||| ||| ||| || | || |||||
Sbjct 282 TTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATTGTGCTGATACCTAAAGCGGTAAA 341
Query 18014 CCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAA 18073
||| || | | || ||||| |||||||||||||| || || | ||| ||||| ||
Sbjct 342 CCAGATACCGATTACTGGCCATGCAGCCAAGAAGAAGTGCAGTGAACGGCTGTTGTTGAA 401
Query 18074 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGT 18133
| ||| || |||||||| | | |||||||| || || || || || || || || ||
Sbjct 402 GGAAGCGTATTGGAAGATCAACCGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAGGT 461
Query 18134 CTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTC- 18192
||||||||||| || || || || || ||||| || || || || || ||||| |
Sbjct 462 TTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTTTGTGATTCGGTTTCTGTGGTTTCACG 521
Query 18193 TAATAAGTGAGGAAGTAAC 18211
|| ||| |||||||||||
Sbjct 522 TACCAAG-GAGGAAGTAAC 539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151302373395386
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |