Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_020837.1
Length=198013
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 522 3e-143
seq7678 329 4e-85
seq7307 226 4e-54
seq7318 206 3e-48
>seq8857
Length=8770
Score = 522 bits (578), Expect = 3e-143
Identities = 689/960 (72%), Gaps = 4/960 (0%)
Strand=Plus/Plus
Query 103173 CAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAGAC 103232
|||| ||||| || |||||||| ||||| ||||| || ||||| ||||||||||| ||
Sbjct 5446 CAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGT 5505
Query 103233 CAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGATGG 103292
||||||||| | | || || ||||| || | |||||||| |||| ||||| | |
Sbjct 5506 TAGCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAG 5565
Query 103293 ACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGTGA 103352
| || ||||| ||||| || || | ||||| ||||| || |||| ||| | || || |
Sbjct 5566 ATTGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAA 5625
Query 103353 ACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTTGA 103412
|||| ||||| | || || | ||||||||||
Sbjct 5626 ACCAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGA 5685
Query 103413 ATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTATG 103472
| ||| |||||||||||||| || || || ||||||||||| ||||| || || || |
Sbjct 5686 AACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAG 5745
Query 103473 TCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTCAC 103532
| ||||||||||| ||||| |||||||| | || ||||||| |||| || || || |
Sbjct 5746 TTTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCC 5805
Query 103533 -GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGAAG 103591
|| | | | || | || |||| ||||| ||||||||||| || || || ||||| ||
Sbjct 5806 TGATCAAACTAGAAGTTACCAAG-GAACCATGCATAGCACTAAATAGGGAGCCACCAAAT 5864
Query 103592 ACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGAAG 103651
|| ||||| || || | |||||| || |||||||| || ||||| ||||| || |||||
Sbjct 5865 ACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAAT 5924
Query 103652 ACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAACCT 103711
|| | ||| ||||||| || || ||||| || | ||||||| |||| || || |||
Sbjct 5925 ACAATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCT 5984
Query 103712 TGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATGCG 103771
||||||| ||||| | |||||| || || | ||||| ||||||||||| || || ||
Sbjct 5985 TGACCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCA 6044
Query 103772 ACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATATAT 103831
||| ||||| |||||||| ||||||||| | || |||||||||||| ||||| ||
Sbjct 6045 ACAGCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAA 6104
Query 103832 GCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACAGC 103891
| | || | | |||||| | || | || | |||||||||| || || | |
Sbjct 6105 CAAGCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAAC 6164
Query 103892 CACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGGAG 103951
|| ||||||| |||||| |||||||| || ||||| ||||| | ||| || || ||
Sbjct 6165 CATTCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAA 6224
Query 103952 GAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACGGGT 104011
| |||| || ||||| ||||| || ||||| ||||| | | || |||| || |||
Sbjct 6225 GTAGGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGT 6284
Query 104012 TCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-GCAGAT 104070
|||||||| || || ||||| || ||||| || || | ||| || | ||| || ||||
Sbjct 6285 TCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGA- 6343
Query 104071 GGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACGGTT 104130
||||| | ||| | || |||||||||| ||||| ||||| |||| || || |||||
Sbjct 6344 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTT 6403
>seq7678
Length=557
Score = 329 bits (364), Expect = 4e-85
Identities = 304/395 (77%), Gaps = 0/395 (0%)
Strand=Plus/Plus
Query 103170 CAGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCA 103229
||||||| | ||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 158 CAGCAGCCAAGTCTAAGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCA 217
Query 103230 GACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGA 103289
||||||||||| ||||| ||||| || | || ||||| ||| ||| | |
Sbjct 218 AGTTAGCGCGGTTGATTACGTCAGCCCAAGTAGCGATGACGCGACCTTGAGAATCGATTA 277
Query 103290 TGGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGG 103349
|| ||||||||||||||||||||||||||||||||||| ||||| | ||| | ||||
Sbjct 278 CTGATTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATTGTGCTGATACCTAAAGCGG 337
Query 103350 TGAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGT 103409
| ||||||||||| | |||||| || |||||
Sbjct 338 TAAACCAGATACCGATTACTGGCCATGCAGCCAAGAAGAAGTGCAGTGAACGGCTGTTGT 397
Query 103410 TGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGT 103469
|||| || ||||||||||||||||| ||||| |||||||| || || |||||||||||||
Sbjct 398 TGAAGGAAGCGTATTGGAAGATCAACCGACCAAAGTAACCGTGTGCAGCTACGATGTTGT 457
Query 103470 ATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCT 103529
| || ||||| |||||||||||||||||||| |||||||| ||||| ||||| || || |
Sbjct 458 AGGTTTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTTTGTGATTCGGTTTCTGTGGTTT 517
Query 103530 CACGAACCAGCGAGGACGTAACAAGCGAACCGTGC 103564
|||| |||| ||||| ||||| | |||||||||
Sbjct 518 CACGTACCAAGGAGGAAGTAACCAAGGAACCGTGC 552
>seq7307
Length=548
Score = 226 bits (250), Expect = 4e-54
Identities = 337/478 (71%), Gaps = 0/478 (0%)
Strand=Plus/Minus
Query 101701 GTATATCACAGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGC 101760
|| ||| | |||||||| || | || | ||||| || || |||||||| | ||| ||
Sbjct 478 GTCTATTAGAGAGCGTTACCACGAGGTAGAACCTCCTCTGGGAATACAAATTGTTCGTGA 419
Query 101761 GGTTGATCGACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTG 101820
|| ||||| || |||| ||| || || | ||| || |||| | ||||| || ||
Sbjct 418 GGCTGATCTTGAGGAGCCATCCAAGCGCGGATACCCTCGTTCAGCAAAATGTTTTTGGTA 359
Query 101821 TAGAACGTCTCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAA 101880
||||| || || || ||||| ||||||||||| | | ||||||||||| ||||| |||
Sbjct 358 TAGAATGTTTCAAATTCTGGGTCTTCTGCTGCCCGCAATTCTTGGGATACGAAGTCGTAA 299
Query 101881 GCACGAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACA 101940
|| || ||||| | || | ||| | || || | || |||||| || | ||
Sbjct 298 GCCCGGAGGTTCAATGCTAAACCCACGATTCCTACTGACGCCATCCACAAGCCTGTGACT 239
Query 101941 GGAACAAAGAGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATT 102000
|| ||||| ||||| ||||| || ||||||| || || || || ||||| || ||
Sbjct 238 GGTACAAACAGCATGAAGAAGTGTAACCACCGTTTGTTGGAGAAGGCGATACCGAATATC 179
Query 102001 TGAGACCAGAAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCG 102060
|| |||||||| ||||| ||||| ||||| || || || ||||| |||| ||| | | |
Sbjct 178 TGTGACCAGAATCGGTTCGCTGTCACCATGGAGTAGGTTTCTTCTGCTTGGGTGTAGTTG 119
Query 102061 AATGCTTTGAAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACA 102120
|| || ||| || || | | ||||| |||||| | | ||||| || || ||| |
Sbjct 118 AAGGCGCGGAAGGTTTTGGATGCTTCACCGTCTTCAAATAAGGTGTTTTCTACTGTGGCT 59
Query 102121 CCGTGGATTGCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGA 102178
||||| || || ||| || ||||| || || | ||| || || |||||||| ||||
Sbjct 58 CCGTGAATGGCACACAATAGCGCTCCACCGAGTACACCCGCTACTCCCATCATGTGGA 1
>seq7318
Length=447
Score = 206 bits (228), Expect = 3e-48
Identities = 252/341 (74%), Gaps = 2/341 (1%)
Strand=Plus/Minus
Query 102002 GAGACCAGAAA-CGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCG 102060
||||| ||||| ||||| || || |||||||||||||| ||||| |||| || | |
Sbjct 340 GAGAC-AGAAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTA 282
Query 102061 AATGCTTTGAAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACA 102120
|| || ||| || ||||| ||||||||||||| | | ||| || || || || ||
Sbjct 281 AAAGCCCGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACCGTCGCA 222
Query 102121 CCGTGGATTGCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAAT 102180
|| || || || | ||||| || | |||| | ||| ||||| ||||||||||| |||
Sbjct 221 CCATGAATAGCGCATAGCAGGGCGGCGCCCAATACACCGGCAACTCCCATCATATGAAAT 162
Query 102181 GGGTTGAGCGTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCA 102240
||||| | ||||| ||||| || || || | || || | ||| | |||||| |||||
Sbjct 161 GGGTTCAAGGTCCAATTATGAAACCCTTGAAAAAATAGGATGAAGCGAAATATAGCTGCT 102
Query 102241 ACACCAAACGAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACA 102300
|||||||| |||||||| ||||||| | ||| || || ||||| || ||||| |||
Sbjct 101 ACACCAAAACTAGGCGCAAAAAACCAACCAGCCTGACCCAGTGGATAAATTAGAAATACA 42
Query 102301 CTGACAAAAACAGCGATAGGCCCAGAGAACGCAATAGCATT 102341
||||||||||| || || ||||| || || || |||||
Sbjct 41 GAAACAAAAACAGCAATTGGACCAGAAAATGCGATTGCATT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633442971152520
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