Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq8857 500 3e-137 seq7678 208 2e-49 >seq8857 Length=8770 Score = 500 bits (554), Expect = 3e-137 Identities = 703/984 (71%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || |||||||| || || || || |||||||| || || | |||||||| Sbjct 5448 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 5507 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 || ||||||| || ||||| ||||| || || || | || | | | | | | |||| Sbjct 5508 GCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 5567 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 || || || ||||||||||| || ||||||||||| ||| | || | |||| |||| Sbjct 5568 TGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAAAC 5627 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710 |||||||| | ||| ||||| ||||| | |||||||| | | ||| || || || || Sbjct 5628 CAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGAAA 5687 Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770 || |||||||||||||| | || |||||||| || |||||||| |||||||| ||||| Sbjct 5688 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAGTT 5747 Query 21771 TCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGA 21830 |||||||||||||| || |||||||| | || || | | ||| || || || | Sbjct 5748 TCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCTG 5807 Query 21831 ATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACG 21890 || | || || |||| | ||| ||||||||| || | ||||||||||| Sbjct 5808 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATACA 5867 Query 21891 CCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACC 21950 || || ||||| | ||||||||| || |||||||| || ||||| ||||||||||| || Sbjct 5868 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATACA 5927 Query 21951 AGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGT 22010 | ||| ||||||| || || || || || | |||||| |||||||||| || || Sbjct 5928 ATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTTGA 5987 Query 22011 CCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACA 22070 |||| || |||| | ||| |||||||| ||||| || |||||||| || ||||||||| Sbjct 5988 CCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCAACA 6047 Query 22071 AAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCA 22130 ||||| || | ||| || || || | || ||||||||||| || ||||||||| | Sbjct 6048 GCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAACAA 6107 Query 22131 AAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCAT 22190 || || | | |||||| | || | || | | ||||| || ||||| | |||| Sbjct 6108 GCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 6167 Query 22191 TCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTC 22250 ||||||| | || |||||||| ||||| || ||||| | ||||| || | | Sbjct 6168 TCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAGTA 6227 Query 22251 GGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCT 22310 |||| | ||| || || || || ||||| || || | || || |||| || ||||| Sbjct 6228 GGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTTCA 6287 Query 22311 CGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTA 22370 || || ||||| || || || || || || ||| ||||| || ||||| || || Sbjct 6288 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGAAGTT 6347 Query 22371 GCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTTATT 22429 |||| ||| ||| | || ||||| | || || |||||||| | ||||| ||||| | Sbjct 6348 GCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTTTC 6406 Query 22430 AGTAGAGGTGACCCAGGAACAAAA 22453 ||| ||| | |||| ||| || Sbjct 6407 AGTGCTGGTTATCCAGTTACAGAA 6430 >seq7678 Length=557 Score = 208 bits (230), Expect = 2e-49 Identities = 297/416 (71%), Gaps = 4/416 (1%) Strand=Plus/Plus Query 21447 GCCACGGGAGTGACCTCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCA 21506 ||||| |||| || || | | || | ||| | ||||||||||| ||||| ||||| Sbjct 139 GCCACAGGAGCAACTTCACCAGCAGCCAAGTCTAAGGGGAAGTTGTGAGCGTTACGCTCG 198 Query 21507 TGCATCACCTCAAAGCCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACC 21566 ||||| || || | || | ||| || ||||| | | ||||||||| || ||| || Sbjct 199 TGCATGACTTCCATACCCAAGTTAGCGCGGTTGATTACGTCAGCCCAAGTAGCGATGACG 258 Query 21567 TGTCCATCAGCAGCTAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATG 21626 | || | || | | | | |||||||| |||||||| || |||| |||||| ||||| Sbjct 259 CGACCTTGAGAATCGATTACTGATTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATT 318 Query 21627 GT--AGACACGCCAAGCGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGA 21684 || || || ||||| | |||||| ||||| | || ||||| ||||| | |||| Sbjct 319 GTGCTGATACCTAAAGCG--GTAAACCAGATACCGATTACTGGCCATGCAGCCAAGAAGA 376 Query 21685 AATGAAGACTACGGGAATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGC 21744 | || || |||| || || ||| ||| ||||||||||| | ||||||||| || | Sbjct 377 AGTGCAGTGAACGGCTGTTGTTGAAGGAAGCGTATTGGAAGATCAACCGACCAAAGTAAC 436 Query 21745 CGTGAGCAGCAACAATATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCT 21804 |||| ||||| || || ||||| || ||||| ||||| || ||||||||||| ||||| | Sbjct 437 CGTGTGCAGCTACGATGTTGTAGGTTTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTTT 496 Query 21805 GTGAAACCTCTTCAGTCGTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGC 21860 |||| | ||| || || ||||| | | || || || |||| | ||||||| Sbjct 497 GTGATTCGGTTTCTGTGGTTTCACGTACCAAGGAGGAAGTAACCAAGGAACCGTGC 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146192514653820