Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_020838.1
Length=45728
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 500 3e-137
seq7678 208 2e-49
>seq8857
Length=8770
Score = 500 bits (554), Expect = 3e-137
Identities = 703/984 (71%), Gaps = 2/984 (0%)
Strand=Plus/Plus
Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530
|| ||||| || |||||||| || || || || |||||||| || || | ||||||||
Sbjct 5448 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 5507
Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590
|| ||||||| || ||||| ||||| || || || | || | | | | | | ||||
Sbjct 5508 GCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 5567
Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650
|| || || ||||||||||| || ||||||||||| ||| | || | |||| ||||
Sbjct 5568 TGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAAAC 5627
Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710
|||||||| | ||| ||||| ||||| | |||||||| | | ||| || || || ||
Sbjct 5628 CAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGAAA 5687
Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770
|| |||||||||||||| | || |||||||| || |||||||| |||||||| |||||
Sbjct 5688 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAGTT 5747
Query 21771 TCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGA 21830
|||||||||||||| || |||||||| | || || | | ||| || || || |
Sbjct 5748 TCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCTG 5807
Query 21831 ATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACG 21890
|| | || || |||| | ||| ||||||||| || | |||||||||||
Sbjct 5808 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATACA 5867
Query 21891 CCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACC 21950
|| || ||||| | ||||||||| || |||||||| || ||||| ||||||||||| ||
Sbjct 5868 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATACA 5927
Query 21951 AGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGT 22010
| ||| ||||||| || || || || || | |||||| |||||||||| || ||
Sbjct 5928 ATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTTGA 5987
Query 22011 CCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACA 22070
|||| || |||| | ||| |||||||| ||||| || |||||||| || |||||||||
Sbjct 5988 CCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCAACA 6047
Query 22071 AAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCA 22130
||||| || | ||| || || || | || ||||||||||| || ||||||||| |
Sbjct 6048 GCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAACAA 6107
Query 22131 AAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCAT 22190
|| || | | |||||| | || | || | | ||||| || ||||| | ||||
Sbjct 6108 GCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 6167
Query 22191 TCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTC 22250
||||||| | || |||||||| ||||| || ||||| | ||||| || | |
Sbjct 6168 TCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAGTA 6227
Query 22251 GGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCT 22310
|||| | ||| || || || || ||||| || || | || || |||| || |||||
Sbjct 6228 GGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTTCA 6287
Query 22311 CGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTA 22370
|| || ||||| || || || || || || ||| ||||| || ||||| || ||
Sbjct 6288 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGAAGTT 6347
Query 22371 GCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTTATT 22429
|||| ||| ||| | || ||||| | || || |||||||| | ||||| ||||| |
Sbjct 6348 GCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTTTC 6406
Query 22430 AGTAGAGGTGACCCAGGAACAAAA 22453
||| ||| | |||| ||| ||
Sbjct 6407 AGTGCTGGTTATCCAGTTACAGAA 6430
>seq7678
Length=557
Score = 208 bits (230), Expect = 2e-49
Identities = 297/416 (71%), Gaps = 4/416 (1%)
Strand=Plus/Plus
Query 21447 GCCACGGGAGTGACCTCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCA 21506
||||| |||| || || | | || | ||| | ||||||||||| ||||| |||||
Sbjct 139 GCCACAGGAGCAACTTCACCAGCAGCCAAGTCTAAGGGGAAGTTGTGAGCGTTACGCTCG 198
Query 21507 TGCATCACCTCAAAGCCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACC 21566
||||| || || | || | ||| || ||||| | | ||||||||| || ||| ||
Sbjct 199 TGCATGACTTCCATACCCAAGTTAGCGCGGTTGATTACGTCAGCCCAAGTAGCGATGACG 258
Query 21567 TGTCCATCAGCAGCTAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATG 21626
| || | || | | | | |||||||| |||||||| || |||| |||||| |||||
Sbjct 259 CGACCTTGAGAATCGATTACTGATTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATT 318
Query 21627 GT--AGACACGCCAAGCGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGA 21684
|| || || ||||| | |||||| ||||| | || ||||| ||||| | ||||
Sbjct 319 GTGCTGATACCTAAAGCG--GTAAACCAGATACCGATTACTGGCCATGCAGCCAAGAAGA 376
Query 21685 AATGAAGACTACGGGAATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGC 21744
| || || |||| || || ||| ||| ||||||||||| | ||||||||| || |
Sbjct 377 AGTGCAGTGAACGGCTGTTGTTGAAGGAAGCGTATTGGAAGATCAACCGACCAAAGTAAC 436
Query 21745 CGTGAGCAGCAACAATATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCT 21804
|||| ||||| || || ||||| || ||||| ||||| || ||||||||||| ||||| |
Sbjct 437 CGTGTGCAGCTACGATGTTGTAGGTTTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTTT 496
Query 21805 GTGAAACCTCTTCAGTCGTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGC 21860
|||| | ||| || || ||||| | | || || || |||| | |||||||
Sbjct 497 GTGATTCGGTTTCTGTGGTTTCACGTACCAAGGAGGAAGTAACCAAGGAACCGTGC 552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146192514653820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |