Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq8857 500 1e-136 seq7678 279 6e-70 seq7307 260 2e-64 seq2177 154 2e-32 seq4590 129 7e-25 seq7318 111 2e-19 >seq8857 Length=8770 Score = 500 bits (554), Expect = 1e-136 Identities = 703/984 (71%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||||||||| |||||||| || ||||| | ||||||||||||||||||||| | ||| Sbjct 5448 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 5507 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | ||| | | |||| | || || | | || | | |||||| || ||| Sbjct 5508 GCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 5567 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 || || || ||||||||||| || ||||| ||||| || | ||||| | || || ||| Sbjct 5568 TGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAAAC 5627 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288 || | || | ||| || || | |||| |||||| || | | | ||||||||||| Sbjct 5628 CAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGAAA 5687 Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348 ||||| |||||||| | || ||||| ||||| || || ||||| || || || ||| Sbjct 5688 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAGTT 5747 Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408 ||||| ||||| ||||| || ||||| | || || || | ||||| ||||| ||| Sbjct 5748 TCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCTG 5807 Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATT 124468 || | | ||| || || | ||||||||||| || |||| || || || || | Sbjct 5808 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATACA 5867 Query 124469 CCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACG 124528 || ||||| ||| |||||| || || ||||| || ||||| || || || ||||| || Sbjct 5868 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATACA 5927 Query 124529 AACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGA 124588 | |||||||||||||||||| || || || || |||||||||||||| || || ||| Sbjct 5928 ATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTTGA 5987 Query 124589 CCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACA 124648 |||| |||||| | ||||| ||||| ||||| | || || |||||||| |||||| Sbjct 5988 CCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCAACA 6047 Query 124649 CAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCT 124708 |||||||| ||||| || | | | | |||||||||| | |||||||| Sbjct 6048 GCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAACAA 6107 Query 124709 GAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCAT 124768 | | ||| | | |||||| | || | | || ||||||||||||||| || |||||| Sbjct 6108 GCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 6167 Query 124769 TCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGAT 124828 |||||||||| ||| |||||||| ||||| || ||||| | |||||||| || | Sbjct 6168 TCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAGTA 6227 Query 124829 GGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCT 124888 |||| || ||||| ||||| || ||||| || || | ||||| || | || ||||| Sbjct 6228 GGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTTCA 6287 Query 124889 CTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGC 124947 | || || || ||||| || ||||| || ||||| || || | ||| || ||| | | Sbjct 6288 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACA-GAAGT 6346 Query 124948 TGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTT 125007 ||| || | |||| || ||||| | |||||||||||| |||| |||| | ||| | Sbjct 6347 TGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTTTC 6406 Query 125008 TGTTGATGTTACCCACTCACAGAA 125031 || |||| ||| | |||||| Sbjct 6407 AGTGCTGGTTATCCAGTTACAGAA 6430 >seq7678 Length=557 Score = 279 bits (308), Expect = 6e-70 Identities = 324/436 (74%), Gaps = 6/436 (1%) Strand=Plus/Plus Query 124006 GATTGTAGGTGCTGTTAATGCAACCTGTGTAGACTCAGCAGATGCTAGGTCTAGTGGGAA 124065 ||||| |||||| ||||| || || | | | ||| ||| || | ||||| ||||| Sbjct 120 GATTGCAGGTGCAGTTAAAGCCACAGGAGCAACTTCACCAGCAGCCAAGTCTAAGGGGAA 179 Query 124066 GTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTTGCTCTGTTTAGAACATC 124125 |||||| || || | || ||||| ||||||||||||||||| || | ||| | || || Sbjct 180 GTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAAGTTAGCGCGGTTGATTACGTC 239 Query 124126 ACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGATTGGTTAAAGTTGAAACC 124185 | |||| || | || || || | || ||| | ||||||||||| |||||||| || Sbjct 240 AGCCCAAGTAGCGATGACGCGACCTTGAGAATCGATTACTGATTGGTTGAAGTTGAATCC 299 Query 124186 ATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAACCATACACATACAACAGG 124245 |||| |||||| |||||||||| |||||| | || ||| ||||| | || | || || Sbjct 300 GTTCAGGTTGAACGCCATTGTGCTGATACCTAAAGCGGTAAACCAGATACCGATTACTGG 359 Query 124246 GAAAACTGCTAGGAAGAAGTGAAG---ACTTCTTGAGTTGTTGAATGAAGCATACTGGAA 124302 | | || | ||||||||| || || || ||||||||| ||||| || ||||| Sbjct 360 CCATGCAGCCAAGAAGAAGTGCAGTGAACGGCT---GTTGTTGAAGGAAGCGTATTGGAA 416 Query 124303 GATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTTTCTTCTTCTTGTCC 124362 ||| | |||||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct 417 GATCAACCGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAGGTTTCTTCTTCTTGTCC 476 Query 124363 GAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTGATTAGAGAAGATGT 124422 |||||| ||||| ||||| ||||| || ||||| ||||| | | | || || || Sbjct 477 GAACTTGTAACCGTAGTTTTGTGATTCGGTTTCTGTGGTTTCACGTACCAAGGAGGAAGT 536 Query 124423 AACAAGAGAACCATGC 124438 ||| | ||||| ||| Sbjct 537 AACCAAGGAACCGTGC 552 >seq7307 Length=548 Score = 260 bits (288), Expect = 2e-64 Identities = 353/494 (71%), Gaps = 25/494 (5%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 ||| || |||||||| | |||| || || |||||||||||||| | || || || || Sbjct 473 TTAGAGAGCGTTACCACGAGGTAGAACCTCCTCTGGGAATACAAATTGTTCGTGAGGCTG 414 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || || || || || | |||||| || |||||||| Sbjct 413 ATCTTGAGGAGCCATCCAAGCGCGGATACCCTCGTTCAGCAAAATGTTTTTGGTATAGAA 354 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 || || || ||||||||||||||||| | | ||||| ||||| |||||||| || | Sbjct 353 TGTTTCAAATTCTGGGTCTTCTGCTGCCCGCAATTCTTGGGATACGAAGTCGTAAGCCCG 294 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 |||||| | ||||| ||| ||||| |||| || | |||||| || |||| || || Sbjct 293 GAGGTTCAATGCTAAACCCACGATTCCTACTGACGCCATCCACAAGCCTGTGACTGGTAC 234 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 |||| ||| | ||||||||| | | |||||| || || |||||||| ||||||||||| Sbjct 233 AAACAGCATGAAGAAGTGTAACCACCGTTTGTTGGAGAAGGCGATACCGAATATCTGTGA 174 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCT--GTGTAGGATCGAAT 123223 |||||||| ||||||||| | ||| || ||||||||| | | |||||| | ||| Sbjct 173 CCAGAATCGGTTCGCTGTCACCATGGAGTAGGTTTCTTCTGCTTGGGTGTAG--TTGAAG 116 Query 123224 GCTCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAAT 123283 || | ||| ||| | ||| ||||| ||||||| | || Sbjct 115 GCGCGGAAGGTTTTGGAT---------GCTTCA------------CCGTCTTCAAATAAG 77 Query 123284 GTGTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCA 123343 ||||| | ||||| || || ||||||||||| | || |||||||| |||| || || Sbjct 76 GTGTTTTCTACTGTGGCTCCGTGAATGGCACACAATAGCGCTCCACCGAGTACACCCGCT 17 Query 123344 ACACCCATCATGTG 123357 || ||||||||||| Sbjct 16 ACTCCCATCATGTG 3 >seq2177 Length=136605 Score = 154 bits (170), Expect = 2e-32 Identities = 339/504 (67%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 138188 AATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATT 138247 ||| ||| || | | ||||| ||||| ||||| ||||| ||||||||||||||||||| Sbjct 6944 AATGGGAGCTCCAGCTGGACCACCACCACCATGAGGAATGGAGAATGTCTTATGTAAATT 6885 Query 138248 TAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAG 138307 | || || |||||||||||| || | ||| | ||| || ||||| ||||| | Sbjct 6884 CAAGTGGCAAACATCTGCACCAAGATCTCCGGGTGAAGTTAGCCCAACCTGCGCATTCAT 6825 Query 138308 ATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC-TGTC 138366 ||| |||||||| | ||| || || |||||| ||| ||||| | | ||| | ||| Sbjct 6824 ATTAGCACCATCCAAATAGACTTGTCCACCAAAAGAATGTACGATATCA-ATAGCATGTT 6766 Query 138367 TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTT 138426 |||| || |||||||| ||| | ||| || ||||| || ||||| | | |||| Sbjct 6765 GGATGCCTGGTTCAAATAAACCGTAAGTAGAAGGATAGGTGATCATTACGGCGGCTAGTT 6706 Query 138427 C----AAATG-TATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATC 138481 | |||| | |||| || || |||| || || | |||| |||||| Sbjct 6705 CTTTAGAATGTTGTTCA-----GCCTTATTCTTTAAGTCAACCAGATCTAATGAGCCATC 6651 Query 138482 ATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGT 138541 | ||| |||||| |||||||| | || ||||| | ||| ||| ||||| || Sbjct 6650 CTGCAAACAGTTGACAGGAACAACTTTTAAACCCGCCATAGCGGCAGAAGCCGGATTTGT 6591 Query 138542 TCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGATCCTTGATG 138601 ||||| || || | || || | ||| || || | | || || ||| | || | Sbjct 6590 ACCATGAGCGGATACAGGGATTAAACACACGTTACGATGATTTTCACCTTTGCTTTCCAG 6531 Query 138602 ATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAA 138661 || | | |||| || ||| || | ||| ||||| || | |||| || |||||||| Sbjct 6530 GTAGGATCTGATTACTCTCAGACCAGTATATTCACCTTGAGCACCTGAATTTGGTTGTAA 6471 Query 138662 TGATATAGAATCAAAACCTGTGAT 138685 || ||| ||| |||||||| || Sbjct 6470 AGAAATACCATCGAAACCTGTAAT 6447 >seq4590 Length=221010 Score = 129 bits (142), Expect = 7e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 139311 AGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTA 139370 || ||||| || ||||| ||||| |||||||| || | | |||| ||||| |||||| Sbjct 47945 AGGGCTTGAGCGGTGCAAATGTTTGAAGTTGCTTTATCACGTTTAATGTGCTGTTCTCTA 47886 Query 139371 GTTTGTAGTGCTAATCTGTATG-CAGGATTGCCTTCGCTGTCCACTGACTGACCTACAAT 139429 ||||||| ||||| | ||| | ||||||| ||| || |||| || ||| ||||| Sbjct 47885 GTTTGTAAAGCTAAAC-GTAGGGCAGGATTACCTAGGCGGTCCTTGGAGATACCAACAAT 47827 Query 139430 TCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACC 139489 ||||||||| || ||||| || || || | || || || |||||||||||||| Sbjct 47826 TCTGCCAGGAATTTTTCTGTTCAGTTTATCAATAACGGCGAAAAAGGCAGCATGAGGACC 47767 Query 139490 TCCGTATCCCATAGGAATACCAAACCTTTG 139519 || || ||||| |||| ||| |||||||| Sbjct 47766 ACCATAACCCATTGGAACACCGAACCTTTG 47737 Score = 107 bits (118), Expect = 2e-18 Identities = 180/258 (70%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 139826 CTTCTTATCTCTTGTAGAATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTTC 139885 ||| || | ||| | | |||| ||| | ||||| || || | || || || |||| Sbjct 47409 CTTTTTCTTTCTGGAAATATTAAATGACAGTAGCATAGCTTCACCAGCCGCGGTACCTTC 47350 Query 139886 ATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGTA 139945 ||| || | || |||||||| | || || || || | || | | | |||||| | Sbjct 47349 ATCCAACAATGAGGCGTTTGCCACAGGCAAACCAGTCAAATCGGAAACTACTGTTTGGAA 47290 Query 139946 ATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATGT 140005 || | ||| ||||||||||| ||||||||||| |||| || || ||||| ||||| || Sbjct 47289 GTTTAGTAATGCTTCCAATCTACCCTGAGATATTTCAGGCTGGTATGGAGTATAAGAAGT 47230 Query 140006 GTACCA-ACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCAT 140064 |||||| || || || || | | ||||| || || ||||| || ||| || || | Sbjct 47229 GTACCATTCTGGGCTT-TCCAATAGGTTTCTTTGAATAACTGGCGGCAAAATCGTGCCGT 47171 Query 140065 AGTATCCTTGACCTATAA 140082 ||||||| | ||| |||| Sbjct 47170 AGTATCCCTTACCAATAA 47153 >seq7318 Length=447 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 123272 TCTTCATACAATGTGTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCT 123331 |||||| | || || || | || || ||||||||||| || ||||| | || | || Sbjct 251 TCTTCAAATAAAGTATTTTCTACCGTCGCACCATGAATAGCGCATAGCAGGGCGGCGCCC 192 Query 123332 AGTATTCCTGCAACACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGT 123391 | || || ||||| |||||||| |||||||| ||||| || || || || ||||| Sbjct 191 AATACACCGGCAACTCCCATCATATGAAATGGGTTCAAGGTCCAATTATGAAACCCTTGA 132 Query 123392 ATGAATAAGATATAACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTG 123451 | |||| ||| | ||||| || ||||| ||||| || || || || ||||||| Sbjct 131 AAAAATAGGATGAAGCGAAATATAGCTGCTACACCAAAACTAGGCGCAAAAAACCAACCA 72 Query 123452 TGCTGACCTAGTGGATAGATCAGAAA 123477 |||||| |||||||| || ||||| Sbjct 71 GCCTGACCCAGTGGATAAATTAGAAA 46 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578933848915880