Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 522 4e-143
seq7678 306 5e-78
seq7318 190 3e-43
seq7307 150 2e-31
>seq8857
Length=8770
Score = 522 bits (578), Expect = 4e-143
Identities = 709/986 (72%), Gaps = 2/986 (0%)
Strand=Plus/Plus
Query 26732 CAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAGAC 26791
|||| || || | || || ||||| || || | ||| || || || || | |||||
Sbjct 5446 CAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGT 5505
Query 26792 CAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAG 26851
||| ||||| | | || || || || || | |||||||| || ||||| ||||
Sbjct 5506 TAGCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAG 5565
Query 26852 ACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGA 26911
| |||||||| |||||||| || | |||||||||||| || | ||| | || || |
Sbjct 5566 ATTGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAA 5625
Query 26912 ACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGA 26971
|||| || || | ||||||||| ||||| | |||||| || || ||||| ||||||||||
Sbjct 5626 ACCAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGA 5685
Query 26972 ATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGG 27031
| ||||||||||||||||| || || || || ||||| || || || || || || |
Sbjct 5686 AACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAG 5745
Query 27032 TCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCAC 27091
| ||||| ||||||||||| || ||||| | || || ||| |||| || || || |
Sbjct 5746 TTTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCC 5805
Query 27092 GGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATA 27151
|| | ||| || |||| || ||||||||| || || || ||||| ||||
Sbjct 5806 TGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATA 5865
Query 27152 CCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAATA 27211
| ||||| ||||| | |||||| || |||||||||||||| |||||||| ||||||||||
Sbjct 5866 CACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATA 5925
Query 27212 CAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCTT 27271
||| ||| |||| ||||||||||| || || ||||||||| |||| || || ||||
Sbjct 5926 CAATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTT 5985
Query 27272 GACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCTA 27331
|||| | || || | | ||| || ||| | ||||| || || ||||| ||||| || |
Sbjct 5986 GACCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCAA 6045
Query 27332 CACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATAAG 27391
|| ||||| || |||||||| | ||| | |||||||||||||| ||||| |||
Sbjct 6046 CAGCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAAC 6105
Query 27392 CATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAACC 27451
| | || | | |||||| | || | || | |||||||||| || || ||||
Sbjct 6106 AAGCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACC 6165
Query 27452 ACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAAC 27511
| ||||| | ||||| |||||||| ||||| || ||||| | |||||| || |||
Sbjct 6166 ATTCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAG 6225
Query 27512 TTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTT 27571
| || | || ||||| || || || ||||| || || | | || |||| ||| ||||
Sbjct 6226 TAGGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTT 6285
Query 27572 CACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GCAGACA 27630
|||||||||| |||||||| || || || || || ||||| || | || || |||| |
Sbjct 6286 CACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGA-A 6344
Query 27631 GTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTTG 27690
||||| | || | || |||||||||| ||||| ||||| |||| || | |||||
Sbjct 6345 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTT 6404
Query 27691 TTAGTTGATGTCACCCACTCACAGAA 27716
| ||| || | ||| | ||||||
Sbjct 6405 TCAGTGCTGGTTATCCAGTTACAGAA 6430
>seq7678
Length=557
Score = 306 bits (338), Expect = 5e-78
Identities = 323/423 (76%), Gaps = 2/423 (0%)
Strand=Plus/Plus
Query 26691 GATGGAAGGAGCAGTAAGTGCTACAGGAGTTGACTCAGCAGCAGCAAGATCCAATGGAAA 26750
||| | ||| ||||| | || ||||||| ||| ||||||| | || || || ||
Sbjct 120 GATTGCAGGTGCAGTTAAAGCCACAGGAGCAACTTCACCAGCAGCCAAGTCTAAGGGGAA 179
Query 26751 ATTATGGGCGTTCCTTTCGTGAATCACCTCTA-ATCCAAGACCAGCACGGTTGAGAACGT 26809
|| || ||||| | ||||| || || || | | ||||| ||| ||||||| ||||
Sbjct 180 GTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAAGTT-AGCGCGGTTGATTACGT 238
Query 26810 CTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAGACTGATTGAAGTTGAAAC 26869
| |||||||| || || ||||| || ||||| || || || || ||||||||||| |
Sbjct 239 CAGCCCAAGTAGCGATGACGCGACCTTGAGAATCGATTACTGATTGGTTGAAGTTGAATC 298
Query 26870 CGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGAACCAGATGCCAACAACGG 26929
|||| || ||||| ||||| ||| | ||| | ||||| |||||||| || | || |
Sbjct 299 CGTTCAGGTTGAACGCCATTGTGCTGATACCTAAAGCGGTAAACCAGATACCGATTACTG 358
Query 26930 GCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAATGAAGCATATTGGAAGA 26989
|||||||||| | ||||||||||| ||||| ||||||||| ||||| ||||||||||
Sbjct 359 GCCATGCAGCCAAGAAGAAGTGCAGTGAACGGCTGTTGTTGAAGGAAGCGTATTGGAAGA 418
Query 26990 TCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTCTCTTCTTCTTGACCGA 27049
|||| ||||| ||||| || ||||| || |||||||||||||| ||||||||||| ||||
Sbjct 419 TCAACCGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAGGTTTCTTCTTCTTGTCCGA 478
Query 27050 ACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGGACGAGTGAAGATGTAA 27109
|||| ||||| ||||| ||||| || ||||| || || ||||| || | || || ||||
Sbjct 479 ACTTGTAACCGTAGTTTTGTGATTCGGTTTCTGTGGTTTCACGTACCAAGGAGGAAGTAA 538
Query 27110 CCA 27112
|||
Sbjct 539 CCA 541
>seq7318
Length=447
Score = 190 bits (210), Expect = 3e-43
Identities = 242/333 (73%), Gaps = 0/333 (0%)
Strand=Plus/Minus
Query 23690 AAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACGCTTT 23749
||| || || || || ||||| ||||| || || || | ||||| | | || ||
Sbjct 333 AAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCCCG 274
Query 23750 AAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCATGAAT 23809
|| || ||||| || ||||||||| | | ||||| || || || | ||||||||
Sbjct 273 GAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACCGTCGCACCATGAAT 214
Query 23810 AGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGTTGAG 23869
||| | || || || | |||| || ||| ||||||||||||||||| || ||||| |
Sbjct 213 AGCGCATAGCAGGGCGGCGCCCAATACACCGGCAACTCCCATCATATGAAATGGGTTCAA 154
Query 23870 CGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAA 23929
||||| |||||||| || || | || || | ||| | || || || || ||||| ||
Sbjct 153 GGTCCAATTATGAAACCCTTGAAAAAATAGGATGAAGCGAAATATAGCTGCTACACCAAA 94
Query 23930 ACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACACGAA 23989
||| |||||||| |||||| | ||| |||| ||||| || || |||||||| || ||
Sbjct 93 ACTAGGCGCAAAAAACCAACCAGCCTGACCCAGTGGATAAATTAGAAATACAGAAACAAA 34
Query 23990 TACAGCAATAGGACCAGAAAAAGCAATCGCATT 24022
|||||||| ||||||||||| || || |||||
Sbjct 33 AACAGCAATTGGACCAGAAAATGCGATTGCATT 1
>seq7307
Length=548
Score = 150 bits (166), Expect = 2e-31
Identities = 276/402 (69%), Gaps = 2/402 (0%)
Strand=Plus/Minus
Query 23459 CATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGAAGGTCTCATACGA 23518
|||||| | |||| || | ||||| |||||| ||||| || ||||| || ||| |
Sbjct 401 CATCCAAGCGCGGATACCCTCGTTCAGCAAAATGTTTTTGGTATAGAATGTTTCAAATTC 342
Query 23519 ACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCACGAAGATTAAGAGC 23578
||||| || || || | ||||| || || || ||||| || || || | ||
Sbjct 341 TGGGTCTTCTGCTGCCCGCAATTCTTGGGATACGAAGTCGTAAGCCCGGAGGTTCAATGC 282
Query 23579 AAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAACAAACAACATAAA 23638
| || | ||| || | || | | ||| | || |||| || ||||||| ||| ||
Sbjct 281 TAAACCCACGATTCCTACTGACGCCATCCACAAGCCTGTGACTGGTACAAACAGCATGAA 222
Query 23639 GAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTGACCAAAAACGATT 23698
|||||| ||||| || || ||| || || | ||||| || |||||||| || || ||
Sbjct 221 GAAGTGTAACCACCGTTTGTTGGAGAAGGCGATACCGAATATCTGTGACCAGAATCGGTT 162
Query 23699 TGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACGCTTTAAAAGTGTT 23758
||||| ||||| || ||||| || || | || ||| | | ||| || || || ||
Sbjct 161 CGCTGTCACCATGGAGTAGGTTTCTTCTGCTTGGGTGTAGTTGAAGGCGCGGAAGGT-TT 103
Query 23759 TGCCTG-TTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAGA 23817
|| || ||| || |||||| | | || || || || || |||| ||||| ||| | |
Sbjct 102 TGGATGCTTCACCGTCTTCAAATAAGGTGTTTTCTACTGTGGCTCCGTGAATGGCACACA 43
Query 23818 GAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGA 23859
|| ||||| || |||| ||| || ||||||||||| ||||
Sbjct 42 ATAGCGCTCCACCGAGTACACCCGCTACTCCCATCATGTGGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665420205693080
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