Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq8857 522 4e-143 seq7678 306 5e-78 seq7318 190 3e-43 seq7307 150 2e-31 >seq8857 Length=8770 Score = 522 bits (578), Expect = 4e-143 Identities = 709/986 (72%), Gaps = 2/986 (0%) Strand=Plus/Plus Query 26732 CAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAGAC 26791 |||| || || | || || ||||| || || | ||| || || || || | ||||| Sbjct 5446 CAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGT 5505 Query 26792 CAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAG 26851 ||| ||||| | | || || || || || | |||||||| || ||||| |||| Sbjct 5506 TAGCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAG 5565 Query 26852 ACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGA 26911 | |||||||| |||||||| || | |||||||||||| || | ||| | || || | Sbjct 5566 ATTGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAA 5625 Query 26912 ACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGA 26971 |||| || || | ||||||||| ||||| | |||||| || || ||||| |||||||||| Sbjct 5626 ACCAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGA 5685 Query 26972 ATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGG 27031 | ||||||||||||||||| || || || || ||||| || || || || || || | Sbjct 5686 AACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAG 5745 Query 27032 TCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCAC 27091 | ||||| ||||||||||| || ||||| | || || ||| |||| || || || | Sbjct 5746 TTTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCC 5805 Query 27092 GGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATA 27151 || | ||| || |||| || ||||||||| || || || ||||| |||| Sbjct 5806 TGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATA 5865 Query 27152 CCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAATA 27211 | ||||| ||||| | |||||| || |||||||||||||| |||||||| |||||||||| Sbjct 5866 CACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATA 5925 Query 27212 CAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCTT 27271 ||| ||| |||| ||||||||||| || || ||||||||| |||| || || |||| Sbjct 5926 CAATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTT 5985 Query 27272 GACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCTA 27331 |||| | || || | | ||| || ||| | ||||| || || ||||| ||||| || | Sbjct 5986 GACCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCAA 6045 Query 27332 CACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATAAG 27391 || ||||| || |||||||| | ||| | |||||||||||||| ||||| ||| Sbjct 6046 CAGCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAAC 6105 Query 27392 CATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAACC 27451 | | || | | |||||| | || | || | |||||||||| || || |||| Sbjct 6106 AAGCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACC 6165 Query 27452 ACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAAC 27511 | ||||| | ||||| |||||||| ||||| || ||||| | |||||| || ||| Sbjct 6166 ATTCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAG 6225 Query 27512 TTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTT 27571 | || | || ||||| || || || ||||| || || | | || |||| ||| |||| Sbjct 6226 TAGGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTT 6285 Query 27572 CACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GCAGACA 27630 |||||||||| |||||||| || || || || || ||||| || | || || |||| | Sbjct 6286 CACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGA-A 6344 Query 27631 GTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTTG 27690 ||||| | || | || |||||||||| ||||| ||||| |||| || | ||||| Sbjct 6345 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTT 6404 Query 27691 TTAGTTGATGTCACCCACTCACAGAA 27716 | ||| || | ||| | |||||| Sbjct 6405 TCAGTGCTGGTTATCCAGTTACAGAA 6430 >seq7678 Length=557 Score = 306 bits (338), Expect = 5e-78 Identities = 323/423 (76%), Gaps = 2/423 (0%) Strand=Plus/Plus Query 26691 GATGGAAGGAGCAGTAAGTGCTACAGGAGTTGACTCAGCAGCAGCAAGATCCAATGGAAA 26750 ||| | ||| ||||| | || ||||||| ||| ||||||| | || || || || Sbjct 120 GATTGCAGGTGCAGTTAAAGCCACAGGAGCAACTTCACCAGCAGCCAAGTCTAAGGGGAA 179 Query 26751 ATTATGGGCGTTCCTTTCGTGAATCACCTCTA-ATCCAAGACCAGCACGGTTGAGAACGT 26809 || || ||||| | ||||| || || || | | ||||| ||| ||||||| |||| Sbjct 180 GTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAAGTT-AGCGCGGTTGATTACGT 238 Query 26810 CTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAGACTGATTGAAGTTGAAAC 26869 | |||||||| || || ||||| || ||||| || || || || ||||||||||| | Sbjct 239 CAGCCCAAGTAGCGATGACGCGACCTTGAGAATCGATTACTGATTGGTTGAAGTTGAATC 298 Query 26870 CGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGAACCAGATGCCAACAACGG 26929 |||| || ||||| ||||| ||| | ||| | ||||| |||||||| || | || | Sbjct 299 CGTTCAGGTTGAACGCCATTGTGCTGATACCTAAAGCGGTAAACCAGATACCGATTACTG 358 Query 26930 GCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAATGAAGCATATTGGAAGA 26989 |||||||||| | ||||||||||| ||||| ||||||||| ||||| |||||||||| Sbjct 359 GCCATGCAGCCAAGAAGAAGTGCAGTGAACGGCTGTTGTTGAAGGAAGCGTATTGGAAGA 418 Query 26990 TCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTCTCTTCTTCTTGACCGA 27049 |||| ||||| ||||| || ||||| || |||||||||||||| ||||||||||| |||| Sbjct 419 TCAACCGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAGGTTTCTTCTTCTTGTCCGA 478 Query 27050 ACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGGACGAGTGAAGATGTAA 27109 |||| ||||| ||||| ||||| || ||||| || || ||||| || | || || |||| Sbjct 479 ACTTGTAACCGTAGTTTTGTGATTCGGTTTCTGTGGTTTCACGTACCAAGGAGGAAGTAA 538 Query 27110 CCA 27112 ||| Sbjct 539 CCA 541 >seq7318 Length=447 Score = 190 bits (210), Expect = 3e-43 Identities = 242/333 (73%), Gaps = 0/333 (0%) Strand=Plus/Minus Query 23690 AAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACGCTTT 23749 ||| || || || || ||||| ||||| || || || | ||||| | | || || Sbjct 333 AAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCCCG 274 Query 23750 AAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCATGAAT 23809 || || ||||| || ||||||||| | | ||||| || || || | |||||||| Sbjct 273 GAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACCGTCGCACCATGAAT 214 Query 23810 AGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGTTGAG 23869 ||| | || || || | |||| || ||| ||||||||||||||||| || ||||| | Sbjct 213 AGCGCATAGCAGGGCGGCGCCCAATACACCGGCAACTCCCATCATATGAAATGGGTTCAA 154 Query 23870 CGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAA 23929 ||||| |||||||| || || | || || | ||| | || || || || ||||| || Sbjct 153 GGTCCAATTATGAAACCCTTGAAAAAATAGGATGAAGCGAAATATAGCTGCTACACCAAA 94 Query 23930 ACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACACGAA 23989 ||| |||||||| |||||| | ||| |||| ||||| || || |||||||| || || Sbjct 93 ACTAGGCGCAAAAAACCAACCAGCCTGACCCAGTGGATAAATTAGAAATACAGAAACAAA 34 Query 23990 TACAGCAATAGGACCAGAAAAAGCAATCGCATT 24022 |||||||| ||||||||||| || || ||||| Sbjct 33 AACAGCAATTGGACCAGAAAATGCGATTGCATT 1 >seq7307 Length=548 Score = 150 bits (166), Expect = 2e-31 Identities = 276/402 (69%), Gaps = 2/402 (0%) Strand=Plus/Minus Query 23459 CATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGAAGGTCTCATACGA 23518 |||||| | |||| || | ||||| |||||| ||||| || ||||| || ||| | Sbjct 401 CATCCAAGCGCGGATACCCTCGTTCAGCAAAATGTTTTTGGTATAGAATGTTTCAAATTC 342 Query 23519 ACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCACGAAGATTAAGAGC 23578 ||||| || || || | ||||| || || || ||||| || || || | || Sbjct 341 TGGGTCTTCTGCTGCCCGCAATTCTTGGGATACGAAGTCGTAAGCCCGGAGGTTCAATGC 282 Query 23579 AAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAACAAACAACATAAA 23638 | || | ||| || | || | | ||| | || |||| || ||||||| ||| || Sbjct 281 TAAACCCACGATTCCTACTGACGCCATCCACAAGCCTGTGACTGGTACAAACAGCATGAA 222 Query 23639 GAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTGACCAAAAACGATT 23698 |||||| ||||| || || ||| || || | ||||| || |||||||| || || || Sbjct 221 GAAGTGTAACCACCGTTTGTTGGAGAAGGCGATACCGAATATCTGTGACCAGAATCGGTT 162 Query 23699 TGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACGCTTTAAAAGTGTT 23758 ||||| ||||| || ||||| || || | || ||| | | ||| || || || || Sbjct 161 CGCTGTCACCATGGAGTAGGTTTCTTCTGCTTGGGTGTAGTTGAAGGCGCGGAAGGT-TT 103 Query 23759 TGCCTG-TTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAGA 23817 || || ||| || |||||| | | || || || || || |||| ||||| ||| | | Sbjct 102 TGGATGCTTCACCGTCTTCAAATAAGGTGTTTTCTACTGTGGCTCCGTGAATGGCACACA 43 Query 23818 GAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGA 23859 || ||||| || |||| ||| || ||||||||||| |||| Sbjct 42 ATAGCGCTCCACCGAGTACACCCGCTACTCCCATCATGTGGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665420205693080