Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2922 333 3e-86 seq3690 239 5e-58 seq2974 87.8 2e-12 seq4210 86.0 7e-12 >seq2922 Length=128268 Score = 333 bits (368), Expect = 3e-86 Identities = 918/1391 (66%), Gaps = 46/1391 (3%) Strand=Plus/Plus Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286 ||| | |||||| | ||||||||||| |||| || || ||| || || || || || Sbjct 121806 ATGAGAGTCGCACTAGGCATCCACGGTAAAGATATCGAGGCTGCTTTAGAAACGTATAAC 121865 Query 75287 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345 |||||| | || ||| || | |||||| | ||||| | |||||||| ||||| || Sbjct 121866 TTGATGTCTCTAAAATATTTT-ACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 121924 Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405 || ||| || |||||| ||| ||| | | |||| ||||||||||| ||| | || || Sbjct 121925 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 121984 Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465 || | || | | ||| ||||| || || || ||||| |||||||| | || Sbjct 121985 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 122044 Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525 |||||| | | | | | | ||| ||| || ||||| ||| || | || Sbjct 122045 TATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACGG 122104 Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585 | | ||||| ||| |||| || || || ||| || || ||||| | || ||| | Sbjct 122105 TTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCA---GGGTGG 122161 Query 75586 TCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGA 75639 | |||| | || | | || | ||| |||||||||||||||| ||||| | || Sbjct 122162 TAACAAGAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGA 122221 Query 75640 GTTCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTT 75698 || |||| ||| || ||||| ||| | || || ||| |||||| | || Sbjct 122222 TTTTATTGATATTAGGAAG-AACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCC 122280 Query 75699 CATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTC 75758 | | || |||||||| || |||||||||||||| || || || ||| ||| | Sbjct 122281 CTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACAT 122340 Query 75759 TTTTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCC 75817 | |||| |||| ||| || || ||| | ||| ||||| |||||||| || Sbjct 122341 TATTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCT 122399 Query 75818 CTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT 75877 || || || || || | || ||| | | || |||| | |||| | | Sbjct 122400 CTATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTA 122456 Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | | ||| | || | || || || ||||| ||||| | | ||||||||||| Sbjct 122457 TGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGAT 122516 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 |||||||||| || ||| ||||| || || || |||||| ||||| | ||| Sbjct 122517 GCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGC 122576 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 |||||| | || ||| ||| | ||||| || |||||||| || ||||| || | Sbjct 122577 TGTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTT 122636 Query 76058 GCCCTTCCAAAGTATGTCAATGAAG---------------AGACTCGCACTTTTGATTAT 76102 ||| | ||| | || ||| |||| ||||| ||| | | | Sbjct 122637 GCCTTACCA--GCAT-TCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTC 122693 Query 76103 GAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGA 76162 ||||| | |||||||| | || ||||||| ||| ||||| |||||||||| | Sbjct 122694 AAAAAATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGT 122753 Query 76163 AATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTG 76222 |||| || || ||||| ||| |||| || |||||| |||| ||||| |||| |||| Sbjct 122754 AATTACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTG 122813 Query 76223 GGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAA 76282 ||||||||||||||||| || || || ||| || | |||||||||| || ||| Sbjct 122814 GGTGTTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAA 122873 Query 76283 GCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGT 76342 ||| | | ||| | ||||||||||| || ||||| || ||| |||| || | Sbjct 122874 GCCCGTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCT 122933 Query 76343 TGTGAATTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCC 76400 |||||| | ||| |||| | ||| | || || || || | || ||||| || || | Sbjct 122934 TGTGAACTAGCTCAGAAG--GACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTC 122991 Query 76401 AAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATG 76460 |||| | || ||||||||||||||||| || || | || | || ||||| Sbjct 122992 AAGGTATACTACAGTTTGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGA-C 123050 Query 76461 TTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAA 76517 || ||| || | |||| | || | ||| || | | | || || |||||||||| Sbjct 123051 ACCTTAAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAA 123108 Query 76518 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAA 76577 |||| || || ||||| | ||||| |||||| |||||||||| || |||||| ||| Sbjct 123109 TGCCTACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACCAGTCACTT 123168 Query 76578 CAAACATCTAC 76588 | || || ||| Sbjct 123169 CCAATATGTAC 123179 >seq3690 Length=234713 Score = 239 bits (264), Expect = 5e-58 Identities = 897/1385 (65%), Gaps = 40/1385 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| || | ||||| | ||||| | || || ||||| ||| ||||||| | | Sbjct 184265 CCACAGCACTTAATCATGAGAGTCGCCCTAGGTATTCACGGTGAAAACATTGAGGCCGCT 184206 Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 || || || || || ||||| | || || || | ||| || | ||||| | || Sbjct 184205 TTAGAAACCTATAACTTAATGTCTCTAAAATACTTT-ACTCATGCCTCTCCAACTTTATT 184147 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| |||||||| |||| || || |||||| || ||| | | || | ||||| || Sbjct 184146 CAACGCTGGTACTCCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGATGA 184087 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || || | ||||| || | ||| | | ||| ||||| || || || ||||| Sbjct 184086 TTCCATTGAAGGTATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCTGG 184027 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| | || ||||| | | | || | ||| ||| || ||||| Sbjct 184026 AGGTATTGGTCTACATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACAAA 183967 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | || | ||||| ||| | || || || ||| || || || ||||| Sbjct 183966 CGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTATGT 183907 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 | |||| || | |||| | || || | || | || ||||| |||||||| Sbjct 183906 TGACCAAGGTGG---TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCA 183850 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || |||||| | || ||| | || | || || || ||| | ||||| || ||| Sbjct 183849 CGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAA-TCCGTG 183791 Query 75685 T-AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 |||||| | || | | || ||| ||||||| |||||||||||||| || || || Sbjct 183790 CGAGAGATTTATTCCCTGCTCTATGGGTTCCAGATCTTTTCATGAAGCGTGTCGAAGAAA 183731 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGT 75802 || ||| || | |||| ||| ||| || ||||| | ||| ||| Sbjct 183730 ACGGCACTTGGACTTTATTCTCTCCT-ACATCTGCCCCAGGCTTGAGTGACTGTTACGGT 183672 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 || || || |||||||| || || || ||| | || ||| | | || |||| | Sbjct 183671 GATGAATTCGAAGCCCTATATACCCGTTACGAAAAAGAAGGTCGTGGTAA---GACTAT- 183616 Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | || | | | || ||| | |||| | || |||| ||||| ||||| ||||||| Sbjct 183615 CAAGGCCCAAAAATTATGGTACTCTATCTTGGAAGCACAAACGGAAACTGGTACACCATT 183556 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 | | ||||||||||||||||||||| ||| ||||||||||| ||||| ||||| Sbjct 183555 TGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTATCAA 183496 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | || ||| | ||| |||||| | || ||| | | | |||||||| |||||||| Sbjct 183495 GTCATCTAATTTGTGCTGTGAAATTGTTGAATACTCTGCTCCAGATGAGACTGCTGTTTG 183436 Query 76042 CAATTTGGCATCAATCGCCCTTCCA--AAGTATGTCAA----TGAAG------AGACTCG 76089 || ||||| || | || | ||| | ||| || ||||| | ||| Sbjct 183435 TAACTTGGCTTCTGTTGCTTTGCCAGCATTTATTGAAACATCTGAAGACGGCAAAACTTC 183376 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 || | | | |||| || |||||||| | || || |||| || ||||| Sbjct 183375 TACATACAACTTCAAAAAGCTACATGAAATTTCTAAAGTTATTACTCGTAACTTAAACAA 183316 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 || |||||| | || | |||||| || ||| || ||| ||||||||| |||| || Sbjct 183315 CGTTATTGACCGTAACTATTATCCTGTCGAGGAAGCAAGAAGATCTAATATGAGACATAG 183256 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATT 76269 || |||| ||||||||| |||||| | || || || || |||| || | |||| Sbjct 183255 GCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACACTTTCATGTTGTTGCGTTTGCCATT 183196 Query 76270 TGATTCAGATGAAGCCAAGGAGA-TGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 || ||||| |||| || | | | ||| || ||||| ||||| || || || || | Sbjct 183195 CGACTCAGAAGAAG-CACGCTTACTAAATATTCAAATCTTCGAAACTATCTACCATGCCT 183137 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 || |||| || ||||||||| ||| || | || | || || || ||| | || | Sbjct 183136 CCATGGAAGCTTCTTGTGAATTAGCTCAAAGAGATGGCCCATACGAAACCTTTAAAGGCT 183077 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA-AGCTCAAC 76447 | || || || ||||| | ||||| || || ||||||| | |||||| | | Sbjct 183076 CCCCGGCTTCTCAAGGTATACTTCAATTCGACATGTGGG-ACCAAAAACCATACGGTATG 183018 Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT-- 76505 | || ||||| ||| | | ||||| |||| | ||| || | ||| ||||| Sbjct 183017 TGGGATTGGGACACTCTGAGAAATAACATCATGGAGCATGGTATTAGAAAC--TCTTTGA 182960 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 |||||||| ||||| || || ||||| | || ||||| ||| | || || || || | Sbjct 182959 CCATGGCACCTATGCCTACTGCATCCACATCTCAGATCTTAGGTTACAACGAGTGTTTCG 182900 Query 76566 AACCA 76570 ||||| Sbjct 182899 AACCA 182895 >seq2974 Length=151892 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || ||||| ||||||||||||||| |||| | || |||||||| || ||||||||| Sbjct 92491 GGCGCCAAAATCCCCCGAGGCGCCATTCTTTCCGGGCCTCCAGGTACCGGTAAGACCCTC 92432 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAAA 175394 | ||| |||| |||||| || | || || || ||| | | ||| |||| | | Sbjct 92431 TTGGCCAAGGCCACCGCGGGCGAGGCCAACGTGCCCTTCTTTTCCGTG-TCTGGTTCCGA 92373 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGC 175424 || ||||| ||||||||||| |||||||| Sbjct 92372 GTTCGTGGAAATGTTTGTTGGGGTGGGTGC 92343 >seq4210 Length=586 Score = 86.0 bits (94), Expect = 7e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 |||||||| ||||| |||| ||||| | || ||| ||||| || ||||||||| Sbjct 28 GGTGCCAAACTCCCCAAGGGCGTTCTTCTTGTTGGCCCGCCCGGTACCGGCAAGACCCTC 87 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395 |||||| ||||| | || ||||| | || |||||| || | |||| | | Sbjct 88 CTCGCCAGAGCCGTGGCCGGTGAGGCTGGCGTGCCATTCTTCTACATGTCTGGATCTGAA 147 Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 |||| ||||| | || ||||| |||||||| | |||||||| ||||||| ||| Sbjct 148 TTTGACGAGATTTACGTCGGTGTTGGTGCCAAGCGCGTTCGCGAACTCTTTGCCGCAGCC 207 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGG 175505 | || ||| || |||||||||| ||| |||| ||||| || Sbjct 208 AAGGCCAAGTCACCCGCCATCATCTTCATTGACGAGCTTGACGCGGTCGG 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596503089946720