Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_020855.1
Length=192497
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 513 2e-140
seq7678 255 7e-63
>seq8857
Length=8770
Score = 513 bits (568), Expect = 2e-140
Identities = 698/974 (72%), Gaps = 0/974 (0%)
Strand=Plus/Plus
Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950
|||| ||||| |||||||| || ||||| | ||||||||||||||||||||| | |||
Sbjct 5448 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 5507
Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010
|| | ||| | | ||| | || ||| ||| | ||| | | |||||| || |||
Sbjct 5508 GCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 5567
Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070
|| || || || || || || | || || ||||| || | |||||| | || ||| |||
Sbjct 5568 TGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAAAC 5627
Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAAAC 8130
|||| || | ||| || | | ||| | |||||| || | | | | |||||| ||
Sbjct 5628 CAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGAAA 5687
Query 8131 GATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTC 8190
|||||| |||||||| |||| ||||| || ||||||||||| ||||||||||| ||
Sbjct 5688 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAGTT 5747
Query 8191 TCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTG 8250
||||| |||||||| || || ||||| | || ||| || | ||| || || || |||
Sbjct 5748 TCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCTG 5807
Query 8251 ATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATA 8310
|| | | ||| || || || ||||| ||||||||||| || || || ||||| || | |
Sbjct 5808 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATACA 5867
Query 8311 CCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACG 8370
|| ||||| ||| ||| || || || |||||||| ||||| || || || ||||||||
Sbjct 5868 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATACA 5927
Query 8371 AACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGA 8430
| ||| ||||| || ||||||||||| ||||||||||| |||||||| || || |||
Sbjct 5928 ATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTTGA 5987
Query 8431 CCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACA 8490
|||| ||| || | ||||| || || |||||| | || ||||| ||| || |||
Sbjct 5988 CCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCAACA 6047
Query 8491 CAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAGCA 8550
||||| || | |||||| | ||| | | ||||||| | |||||||||| |
Sbjct 6048 GCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAACAA 6107
Query 8551 GAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACCAC 8610
| | || | | |||||| | | || | || ||| ||||| || || || |||||
Sbjct 6108 GCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 6167
Query 8611 TCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGAT 8670
||||| | | || |||||||| || ||||| ||||| || || ||||| ||||
Sbjct 6168 TCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAGTA 6227
Query 8671 GGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTCA 8730
|||| | ||||| ||||| || |||||||| || | || || || | ||||||||||
Sbjct 6228 GGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTTCA 6287
Query 8731 CGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGCA 8790
|||||||| || ||||| || || ||||||||||| || || | |||||| || ||
Sbjct 6288 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGAAGTT 6347
Query 8791 GCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGTTT 8850
|| | || ||| ||| ||||| | ||| |||||||| || | ||||| | ||| |
Sbjct 6348 GCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTTTCA 6407
Query 8851 GTACTTGTAACCCA 8864
|| || || | |||
Sbjct 6408 GTGCTGGTTATCCA 6421
>seq7678
Length=557
Score = 255 bits (282), Expect = 7e-63
Identities = 296/399 (74%), Gaps = 0/399 (0%)
Strand=Plus/Plus
Query 7882 TCAGCAGATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATA 7941
||| ||| || |||||||| ||||||||||| || || | || ||||| |||||||||
Sbjct 154 TCACCAGCAGCCAAGTCTAAGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATA 213
Query 7942 CCTAAGTTTGCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCA 8001
|| ||||| || | ||| | ||||||| |||| |||| |||| ||| | | |||
Sbjct 214 CCCAAGTTAGCGCGGTTGATTACGTCAGCCCAAGTAGCGATGACGCGACCTTGAGAATCG 273
Query 8002 ACAACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATA 8061
| ||||||||||| ||||| |||||||| ||||| || |||||||||| ||||| | |
Sbjct 274 ATTACTGATTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATTGTGCTGATACCTAAA 333
Query 8062 GAAGTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTG 8121
| || ||||| | || | ||||| ||| ||| | ||||||||| || | |||
Sbjct 334 GCGGTAAACCAGATACCGATTACTGGCCATGCAGCCAAGAAGAAGTGCAGTGAACGGCTG 393
Query 8122 TTGTTAAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATA 8181
||||| || || || || |||||||| || | ||||||||| || || ||||| || ||
Sbjct 394 TTGTTGAAGGAAGCGTATTGGAAGATCAACCGACCAAAGTAACCGTGTGCAGCTACGATG 453
Query 8182 TTATAGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTT 8241
|| ||||| ||||||||||| || ||||| ||||| ||||| || || || ||| ||
Sbjct 454 TTGTAGGTTTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTTTGTGATTCGGTTTCTGTG 513
Query 8242 GTCTCTCTGATTAGAGAAGATGTAACTAAAGAACCGTGC 8280
|| || | | | || || ||||| || |||||||||
Sbjct 514 GTTTCACGTACCAAGGAGGAAGTAACCAAGGAACCGTGC 552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 615793739040680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |