Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq8857 513 2e-140 seq7678 255 7e-63 >seq8857 Length=8770 Score = 513 bits (568), Expect = 2e-140 Identities = 698/974 (72%), Gaps = 0/974 (0%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| ||||| |||||||| || ||||| | ||||||||||||||||||||| | ||| Sbjct 5448 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 5507 Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010 || | ||| | | ||| | || ||| ||| | ||| | | |||||| || ||| Sbjct 5508 GCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 5567 Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070 || || || || || || || | || || ||||| || | |||||| | || ||| ||| Sbjct 5568 TGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAAAC 5627 Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAAAC 8130 |||| || | ||| || | | ||| | |||||| || | | | | |||||| || Sbjct 5628 CAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGAAA 5687 Query 8131 GATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTC 8190 |||||| |||||||| |||| ||||| || ||||||||||| ||||||||||| || Sbjct 5688 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAGTT 5747 Query 8191 TCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTG 8250 ||||| |||||||| || || ||||| | || ||| || | ||| || || || ||| Sbjct 5748 TCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCTG 5807 Query 8251 ATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATA 8310 || | | ||| || || || ||||| ||||||||||| || || || ||||| || | | Sbjct 5808 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATACA 5867 Query 8311 CCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACG 8370 || ||||| ||| ||| || || || |||||||| ||||| || || || |||||||| Sbjct 5868 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATACA 5927 Query 8371 AACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGA 8430 | ||| ||||| || ||||||||||| ||||||||||| |||||||| || || ||| Sbjct 5928 ATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTTGA 5987 Query 8431 CCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACA 8490 |||| ||| || | ||||| || || |||||| | || ||||| ||| || ||| Sbjct 5988 CCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCAACA 6047 Query 8491 CAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAGCA 8550 ||||| || | |||||| | ||| | | ||||||| | |||||||||| | Sbjct 6048 GCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAACAA 6107 Query 8551 GAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACCAC 8610 | | || | | |||||| | | || | || ||| ||||| || || || ||||| Sbjct 6108 GCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 6167 Query 8611 TCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGAT 8670 ||||| | | || |||||||| || ||||| ||||| || || ||||| |||| Sbjct 6168 TCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAGTA 6227 Query 8671 GGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTCA 8730 |||| | ||||| ||||| || |||||||| || | || || || | |||||||||| Sbjct 6228 GGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTTCA 6287 Query 8731 CGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGCA 8790 |||||||| || ||||| || || ||||||||||| || || | |||||| || || Sbjct 6288 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGAAGTT 6347 Query 8791 GCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGTTT 8850 || | || ||| ||| ||||| | ||| |||||||| || | ||||| | ||| | Sbjct 6348 GCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTTTCA 6407 Query 8851 GTACTTGTAACCCA 8864 || || || | ||| Sbjct 6408 GTGCTGGTTATCCA 6421 >seq7678 Length=557 Score = 255 bits (282), Expect = 7e-63 Identities = 296/399 (74%), Gaps = 0/399 (0%) Strand=Plus/Plus Query 7882 TCAGCAGATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATA 7941 ||| ||| || |||||||| ||||||||||| || || | || ||||| ||||||||| Sbjct 154 TCACCAGCAGCCAAGTCTAAGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATA 213 Query 7942 CCTAAGTTTGCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCA 8001 || ||||| || | ||| | ||||||| |||| |||| |||| ||| | | ||| Sbjct 214 CCCAAGTTAGCGCGGTTGATTACGTCAGCCCAAGTAGCGATGACGCGACCTTGAGAATCG 273 Query 8002 ACAACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATA 8061 | ||||||||||| ||||| |||||||| ||||| || |||||||||| ||||| | | Sbjct 274 ATTACTGATTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATTGTGCTGATACCTAAA 333 Query 8062 GAAGTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTG 8121 | || ||||| | || | ||||| ||| ||| | ||||||||| || | ||| Sbjct 334 GCGGTAAACCAGATACCGATTACTGGCCATGCAGCCAAGAAGAAGTGCAGTGAACGGCTG 393 Query 8122 TTGTTAAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATA 8181 ||||| || || || || |||||||| || | ||||||||| || || ||||| || || Sbjct 394 TTGTTGAAGGAAGCGTATTGGAAGATCAACCGACCAAAGTAACCGTGTGCAGCTACGATG 453 Query 8182 TTATAGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTT 8241 || ||||| ||||||||||| || ||||| ||||| ||||| || || || ||| || Sbjct 454 TTGTAGGTTTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTTTGTGATTCGGTTTCTGTG 513 Query 8242 GTCTCTCTGATTAGAGAAGATGTAACTAAAGAACCGTGC 8280 || || | | | || || ||||| || ||||||||| Sbjct 514 GTTTCACGTACCAAGGAGGAAGTAACCAAGGAACCGTGC 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615793739040680