Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_020859.1
Length=175430
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 601 4e-167
seq7678 376 3e-99
seq7307 250 3e-61
seq7318 176 5e-39
>seq8857
Length=8770
Score = 601 bits (666), Expect = 4e-167
Identities = 727/987 (74%), Gaps = 2/987 (0%)
Strand=Plus/Minus
Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827
|||||| | ||| | |||||||| | ||||| || || | || ||||||||| |
Sbjct 6431 CTTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTT 6372
Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886
|||||| || || | ||| | |||||| |||| || ||| | |||||||| |||||||
Sbjct 6371 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTC 6313
Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946
| || || || || || || || |||||||| || |||| ||| || | || || ||||
Sbjct 6312 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACA 6253
Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006
| || ||||| ||||| || |||| |||| || || ||| | ||||| ||||| |
Sbjct 6252 ATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAA 6193
Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066
| |||||||| ||||| |||| |||||| | || || |||||||||| | || |||
Sbjct 6192 TATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 6133
Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126
| | |||||| | | || | | |||||||||||||||||||||||| || ||
Sbjct 6132 TTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCC 6073
Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTG 166186
|||| |||||||| || ||||| |||||| || ||||| || || || ||||| | ||
Sbjct 6072 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTG 6013
Query 166187 CAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 166246
| || ||| | | || || | |||||||| || || ||||||| ||||| || || |
Sbjct 6012 CTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCA 5953
Query 166247 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATC 166306
| || || || ||||||| ||| | || ||||| ||||| ||||| || || ||||| |
Sbjct 5952 TTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACC 5893
Query 166307 CCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACG 166366
| || || ||| | || || ||||| |||||||||||| | |||||||||||||| |
Sbjct 5892 CATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATG 5833
Query 166367 GAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACG 166426
| ||||| |||||| | | | || || || || |||| ||||| || | |
Sbjct 5832 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 5773
Query 166427 GTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCG 166486
||||||| ||||| ||||| |||||||| || || || ||||| ||||||||||| || |
Sbjct 5772 GTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 5713
Query 166487 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTG 166546
| || |||||||||||||| || ||||||||||| || || || || |||||| | |
Sbjct 5712 GCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAG 5653
Query 166547 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 166606
|||| ||||| ||| |||| || ||||| || || | || | || ||||| ||||
Sbjct 5652 CTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 5593
Query 166607 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 166666
| | || |||||||| ||||| || || | ||||| |||| |||||||| | || |
Sbjct 5592 ATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 5533
Query 166667 CCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACG 166726
|||| || ||| | ||||||||||| || |||||||||||||||||||| ||||| |
Sbjct 5532 CCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 5473
Query 166727 CACACAACTTCCCCCTCGACCTCGCTG 166753
| || |||||||| || ||||| ||||
Sbjct 5472 CTCATAACTTCCCTCTAGACCTAGCTG 5446
>seq7678
Length=557
Score = 376 bits (416), Expect = 3e-99
Identities = 337/423 (80%), Gaps = 0/423 (0%)
Strand=Plus/Minus
Query 166372 TTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTAC 166431
||||||||||| || | || | || || || ||||||||||| |||||||||||||||
Sbjct 542 TTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTAC 483
Query 166432 AAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGT 166491
||||||||||||||||||||||| |||||||||||||| || || |||||||| |||||
Sbjct 482 AAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGG 423
Query 166492 TTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCA 166551
|||||||||||||||||||| ||||||||| ||| || ||||||||||| | ||||||
Sbjct 422 TTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCA 363
Query 166552 TGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTG 166611
||||| || |||| |||||||| ||||| | || || ||| ||||| |||||||||
Sbjct 362 TGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTG 303
Query 166612 AACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGG 166671
||||| |||||||||||||| || | | ||| ||| ||||| || | || |||
Sbjct 302 AACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGG 243
Query 166672 GCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACAC 166731
|| || || | ||||||||| | ||||||||||| ||||| ||||||||||| |||
Sbjct 242 GCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCAC 183
Query 166732 AACTTCCCCCTCGACCTCGCTGCTGCTGAGTCCACTCCTGTGGCACTCACCGCTCCTGCG 166791
||||||||| | ||| | ||||||| ||| |||||||||| | || || |||||
Sbjct 182 AACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCTGCA 123
Query 166792 ATC 166794
|||
Sbjct 122 ATC 120
>seq7307
Length=548
Score = 250 bits (276), Expect = 3e-61
Identities = 340/472 (72%), Gaps = 2/472 (0%)
Strand=Plus/Plus
Query 167560 CATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAATCCATGGTGTT 167619
|| |||||||| ||||| ||| | || ||||| || | | | ||| || || || |
Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62
Query 167620 ACAGTAGAGAATACTTTGTATGAAGATGGTGA-GCAAGCAAACACTTTTAAGGCATTCGA 167678
|||||||| || || || | |||||| ||||| ||| |||| || || || ||| |
Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAA-ACCTTCCGCGCCTTCAA 121
Query 167679 TTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGAT 167738
| || || | |||||| || || || ||||| ||||| |||||||||||||| |||||
Sbjct 122 CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGAT 181
Query 167739 CTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGT 167798
||||| || || ||| ||||||||| ||| | || ||||| ||| | || || || ||
Sbjct 182 ATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAGT 241
Query 167799 TATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCTTCGTGCTTA 167858
| || | |||| | || | || ||| | ||| | || | || || || |||||
Sbjct 242 CACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTTA 301
Query 167859 CGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAACTTTCTATAC 167918
||| ||||| || ||||| | | || || || || ||||| |||||||| ||||||||
Sbjct 302 CGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATAC 361
Query 167919 TAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCGATCAACCTCA 167978
|||||||| | ||||| || ||| | || || ||| | || ||| ||||| |||||
Sbjct 362 CAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTCA 421
Query 167979 TGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTATAA 168030
|| | ||||| ||||||||||| ||||| || || || ||||| || |||
Sbjct 422 CGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAA 473
>seq7318
Length=447
Score = 176 bits (194), Expect = 5e-39
Identities = 243/340 (71%), Gaps = 0/340 (0%)
Strand=Plus/Plus
Query 167395 AATGCTATTGCTTTCTCTGGTCCTATTGCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCC 167454
||||| || || || |||||||| |||||||| || ||| || || || | |||||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 167455 CTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCCTTCGGAGTCGCCGCCATCTTCCGATTC 167514
|| ||||| | ||||| ||||| || || || || || || || || || |||
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 167515 CTCCTCTTCCTCCAAGGATTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTA 167574
|||| || | ||||| || || || ||||| |||| ||||||||||||||||| ||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 167575 GCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACT 167634
|| ||| | |||| | || |||| | || || ||||||| || ||||| ||||||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 167635 TTGTATGAAGATGGTGAGCAAGCAAACACTTTTAAGGCATTCGATTCTACTCAGGAAGAA 167694
|| | |||||||||||| ||||| || || ||| || | | ||||| | |||
Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300
Query 167695 GAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTC 167734
|| |||||||||||||| || || ||||| || |||||
Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCTGTCTC 340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561185427863600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |