Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq8857 601 4e-167 seq7678 376 3e-99 seq7307 250 3e-61 seq7318 176 5e-39 >seq8857 Length=8770 Score = 601 bits (666), Expect = 4e-167 Identities = 727/987 (74%), Gaps = 2/987 (0%) Strand=Plus/Minus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 |||||| | ||| | |||||||| | ||||| || || | || ||||||||| | Sbjct 6431 CTTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTT 6372 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886 |||||| || || | ||| | |||||| |||| || ||| | |||||||| ||||||| Sbjct 6371 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTC 6313 Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946 | || || || || || || || |||||||| || |||| ||| || | || || |||| Sbjct 6312 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACA 6253 Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006 | || ||||| ||||| || |||| |||| || || ||| | ||||| ||||| | Sbjct 6252 ATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAA 6193 Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066 | |||||||| ||||| |||| |||||| | || || |||||||||| | || ||| Sbjct 6192 TATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 6133 Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126 | | |||||| | | || | | |||||||||||||||||||||||| || || Sbjct 6132 TTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCC 6073 Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTG 166186 |||| |||||||| || ||||| |||||| || ||||| || || || ||||| | || Sbjct 6072 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTG 6013 Query 166187 CAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 166246 | || ||| | | || || | |||||||| || || ||||||| ||||| || || | Sbjct 6012 CTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCA 5953 Query 166247 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATC 166306 | || || || ||||||| ||| | || ||||| ||||| ||||| || || ||||| | Sbjct 5952 TTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACC 5893 Query 166307 CCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACG 166366 | || || ||| | || || ||||| |||||||||||| | |||||||||||||| | Sbjct 5892 CATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATG 5833 Query 166367 GAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACG 166426 | ||||| |||||| | | | || || || || |||| ||||| || | | Sbjct 5832 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 5773 Query 166427 GTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCG 166486 ||||||| ||||| ||||| |||||||| || || || ||||| ||||||||||| || | Sbjct 5772 GTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 5713 Query 166487 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTG 166546 | || |||||||||||||| || ||||||||||| || || || || |||||| | | Sbjct 5712 GCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAG 5653 Query 166547 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 166606 |||| ||||| ||| |||| || ||||| || || | || | || ||||| |||| Sbjct 5652 CTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 5593 Query 166607 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 166666 | | || |||||||| ||||| || || | ||||| |||| |||||||| | || | Sbjct 5592 ATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 5533 Query 166667 CCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACG 166726 |||| || ||| | ||||||||||| || |||||||||||||||||||| ||||| | Sbjct 5532 CCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 5473 Query 166727 CACACAACTTCCCCCTCGACCTCGCTG 166753 | || |||||||| || ||||| |||| Sbjct 5472 CTCATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 376 bits (416), Expect = 3e-99 Identities = 337/423 (80%), Gaps = 0/423 (0%) Strand=Plus/Minus Query 166372 TTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTAC 166431 ||||||||||| || | || | || || || ||||||||||| ||||||||||||||| Sbjct 542 TTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTAC 483 Query 166432 AAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGT 166491 ||||||||||||||||||||||| |||||||||||||| || || |||||||| ||||| Sbjct 482 AAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGG 423 Query 166492 TTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCA 166551 |||||||||||||||||||| ||||||||| ||| || ||||||||||| | |||||| Sbjct 422 TTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCA 363 Query 166552 TGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTG 166611 ||||| || |||| |||||||| ||||| | || || ||| ||||| ||||||||| Sbjct 362 TGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTG 303 Query 166612 AACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGG 166671 ||||| |||||||||||||| || | | ||| ||| ||||| || | || ||| Sbjct 302 AACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGG 243 Query 166672 GCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACAC 166731 || || || | ||||||||| | ||||||||||| ||||| ||||||||||| ||| Sbjct 242 GCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCAC 183 Query 166732 AACTTCCCCCTCGACCTCGCTGCTGCTGAGTCCACTCCTGTGGCACTCACCGCTCCTGCG 166791 ||||||||| | ||| | ||||||| ||| |||||||||| | || || ||||| Sbjct 182 AACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCTGCA 123 Query 166792 ATC 166794 ||| Sbjct 122 ATC 120 >seq7307 Length=548 Score = 250 bits (276), Expect = 3e-61 Identities = 340/472 (72%), Gaps = 2/472 (0%) Strand=Plus/Plus Query 167560 CATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAATCCATGGTGTT 167619 || |||||||| ||||| ||| | || ||||| || | | | ||| || || || | Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62 Query 167620 ACAGTAGAGAATACTTTGTATGAAGATGGTGA-GCAAGCAAACACTTTTAAGGCATTCGA 167678 |||||||| || || || | |||||| ||||| ||| |||| || || || ||| | Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAA-ACCTTCCGCGCCTTCAA 121 Query 167679 TTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGAT 167738 | || || | |||||| || || || ||||| ||||| |||||||||||||| ||||| Sbjct 122 CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGAT 181 Query 167739 CTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGT 167798 ||||| || || ||| ||||||||| ||| | || ||||| ||| | || || || || Sbjct 182 ATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAGT 241 Query 167799 TATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCTTCGTGCTTA 167858 | || | |||| | || | || ||| | ||| | || | || || || ||||| Sbjct 242 CACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTTA 301 Query 167859 CGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAACTTTCTATAC 167918 ||| ||||| || ||||| | | || || || || ||||| |||||||| |||||||| Sbjct 302 CGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATAC 361 Query 167919 TAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCGATCAACCTCA 167978 |||||||| | ||||| || ||| | || || ||| | || ||| ||||| ||||| Sbjct 362 CAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTCA 421 Query 167979 TGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTATAA 168030 || | ||||| ||||||||||| ||||| || || || ||||| || ||| Sbjct 422 CGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAA 473 >seq7318 Length=447 Score = 176 bits (194), Expect = 5e-39 Identities = 243/340 (71%), Gaps = 0/340 (0%) Strand=Plus/Plus Query 167395 AATGCTATTGCTTTCTCTGGTCCTATTGCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCC 167454 ||||| || || || |||||||| |||||||| || ||| || || || | ||||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 167455 CTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCCTTCGGAGTCGCCGCCATCTTCCGATTC 167514 || ||||| | ||||| ||||| || || || || || || || || || ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 167515 CTCCTCTTCCTCCAAGGATTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTA 167574 |||| || | ||||| || || || ||||| |||| ||||||||||||||||| || Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 167575 GCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACT 167634 || ||| | |||| | || |||| | || || ||||||| || ||||| |||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 167635 TTGTATGAAGATGGTGAGCAAGCAAACACTTTTAAGGCATTCGATTCTACTCAGGAAGAA 167694 || | |||||||||||| ||||| || || ||| || | | ||||| | ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 167695 GAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTC 167734 || |||||||||||||| || || ||||| || ||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCTGTCTC 340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561185427863600