Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_020865.1
Length=45730
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 500 3e-137
seq7678 208 2e-49
>seq8857
Length=8770
Score = 500 bits (554), Expect = 3e-137
Identities = 703/984 (71%), Gaps = 2/984 (0%)
Strand=Plus/Minus
Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293
|| ||| |||| | ||| ||| | ||||| ||||| | |||||||| || || |
Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371
Query 41294 ATGATTCCGTGCCTCCTTG-CCGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACC 41352
||||| || | ||| ||| |||| || || ||||| || ||||| ||| || ||
Sbjct 6370 ATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCC 6312
Query 41353 ACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAA 41412
|| || || || ||||| || || ||||| || |||| || || | || || |||||
Sbjct 6311 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAA 6252
Query 41413 CATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAAT 41472
|| || || || ||| | |||| | | || ||||| | ||||| || |||||
Sbjct 6251 TATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAAT 6192
Query 41473 TTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGT 41532
|||||||| || | ||||||||||| | ||||| || ||||| | | || | ||
Sbjct 6191 ATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 6132
Query 41533 ATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCG 41592
| |||||| | | || || | ||||||||| || ||||||||||| || | ||
Sbjct 6131 TCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCG 6072
Query 41593 ACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGC 41652
|| || ||| | || ||||| ||||||||| || |||||||| || ||||| |||||
Sbjct 6071 TCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGC 6012
Query 41653 TGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGAT 41712
||| ||| | |||| || |||| || || |||||||||| |||||| | || ||
Sbjct 6011 TGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCAT 5952
Query 41713 ATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCC 41772
|| || || ||||||| ||| | || ||||||||||| ||||| || |||||||| ||
Sbjct 5951 TTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCC 5892
Query 41773 TTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGG 41832
||||||||| | ||||| || || ||||||||||| | || ||||||||| ||
Sbjct 5891 ATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGG 5832
Query 41833 TAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGG 41892
| | |||| || || | || | || || || ||| | | || || | ||
Sbjct 5831 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 5772
Query 41893 TTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGG 41952
|||||| || |||||||||||||| ||||| |||||||| |||||||| || ||||||||
Sbjct 5771 TTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGG 5712
Query 41953 TCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGC 42012
|| | |||||||||||||| || || || || || ||| | | |||||||| | ||
Sbjct 5711 CCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGC 5652
Query 42013 TGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAA 42072
||| ||||| ||| | |||||||||||| |||| | || | ||| |||||||||||
Sbjct 5651 TGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 5592
Query 42073 CTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACAC 42132
|| ||||||||||| || || |||||| | | | | | | || | || || || ||
Sbjct 5591 TTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 5532
Query 42133 CTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGC 42192
||| ||||| || ||||||| || |||||||| | || || |||||||| || || ||
Sbjct 5531 CTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 5472
Query 42193 ACACAACTTCCCGCTTGACCTTGC 42216
|| |||||||| || ||||| ||
Sbjct 5471 TCATAACTTCCCTCTAGACCTAGC 5448
>seq7678
Length=557
Score = 208 bits (230), Expect = 2e-49
Identities = 297/416 (71%), Gaps = 4/416 (1%)
Strand=Plus/Minus
Query 41827 GCACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAA 41886
||||||| | |||| || || || | | ||||| || || ||| | ||||| ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 41887 CTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTA 41946
||| ||||||||||| || ||||| ||||| || ||||| || || ||||| ||||| ||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 41947 TTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTT 42006
||||||||| | ||||||||||| ||| ||| || || |||| || || |||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 42007 TCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCT--ACCATG 42064
| ||||| ||||| || | ||||| |||||| | ||||| || || || |||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTAC--CGCTTTAGGTATCAGCACAATG 315
Query 42065 GCTTTCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTG 42124
|| |||||| |||| || |||||||| |||||||| | | | | || | || | ||
Sbjct 314 GCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTC 255
Query 42125 ATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAG 42184
||| || ||||||||| | | ||||| || ||| | || | || || ||||| |||
Sbjct 254 ATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAG 195
Query 42185 CGGAACGCACACAACTTCCCGCTTGACCTTGCATCCGTGGAGGTCACTCCCGTGGC 42240
|| ||||| ||||||||||| | ||| | || | | || || |||| |||||
Sbjct 194 CGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGC 139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146198913975976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |