Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq8857 553 4e-153 seq7678 228 2e-55 >seq8857 Length=8770 Score = 553 bits (612), Expect = 4e-153 Identities = 722/994 (73%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||||||| | || ||| | ||||| ||||| |||| |||||| Sbjct 6439 TGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTT 6380 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || | | | || || | ||| ||||| | || |||| Sbjct 6379 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATCATAGCCTTCA 6322 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 ||||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||| | || | Sbjct 6321 TTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTT 6262 Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517 | || ||||| || ||||| |||||| | | |||| | || || || | || | Sbjct 6261 ACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACT 6202 Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577 | ||| | || |||||||| | |||| |||||| | |||||||| || |||||| Sbjct 6201 TTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATG 6142 Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637 |||| | || | |||||| | | ||| | | |||| |||| || || ||||||| Sbjct 6141 AGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAAC 6082 Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697 | | ||| || || ||| | || ||||| |||||| || || || ||||| || | Sbjct 6081 TGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAG 6022 Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757 | || ||||| || ||| | | || ||| |||| ||||| ||||| ||||| |||| Sbjct 6021 CTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGC 5962 Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817 |||| |||||||| ||||| |||||||| ||| | || |||||||||||||| ||||| | Sbjct 5961 CTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCC 5902 Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877 ||||||| || || || ||| | ||||| || || ||||||||||| || | || | Sbjct 5901 TTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTG 5842 Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937 ||||||||||| | || || ||| | | | | ||||| || ||||| ||| Sbjct 5841 CTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTG 5782 Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997 ||| | || ||||| |||||||||||||| || |||||||| ||||| || || |||| Sbjct 5781 CTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATG 5722 Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACT 43057 |||| ||||| || | |||||||||||||| || || || ||| ||||| || | Sbjct 5721 GTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATT 5662 Query 43058 TCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTA 43117 |||| | || |||||||||||| | || |||||||| ||| || | || | ||||||| Sbjct 5661 TCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTA 5602 Query 43118 TGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATG 43177 |||| || || || |||||||| || || || ||||| | ||||||| ||| || || Sbjct 5601 TGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTG 5542 Query 43178 TCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACG 43237 | || ||| || |||||||| | || || || |||||||| | || || ||||| | Sbjct 5541 TAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATG 5482 Query 43238 AGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 | || ||||| ||||||||||| || || || || Sbjct 5481 AACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448 >seq7678 Length=557 Score = 228 bits (252), Expect = 2e-55 Identities = 290/399 (73%), Gaps = 0/399 (0%) Strand=Plus/Minus Query 42910 GTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAG 42969 || |||||||| || |||| |||| ||||| || || ||||||||||| ||||| || Sbjct 524 GTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTACAAGTTCGGACAAGAAGAA 465 Query 42970 GAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCG 43029 || || || ||||| || || || || ||||||||||| ||| | ||||||||||| || Sbjct 464 GAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGGTTGATCTTCCAATACGCT 405 Query 43030 TCGTTTAATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATT 43089 || || || || || || || |||||||||| | || || ||||| || | || || Sbjct 404 TCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCATGGCCAGTAATCGGTATC 345 Query 43090 TGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAAC 43149 ||||| || || | || |||| || |||||||| ||| |||| || || ||||| ||| Sbjct 344 TGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTGAACGGATTCAACTTCAAC 285 Query 43150 CAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGT 43209 |||||| | | ||| ||| || |||||| ||||||||||||| | | || || Sbjct 284 CAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGGGCTGACGTAATCAACCGC 225 Query 43210 GCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTT 43269 || ||| | || | || || ||||||||||| || || || |||||||| | || | Sbjct 224 GCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCCTTAGACTTG 165 Query 43270 GCATCCGTGGAGGTTACTCCCGTGGCACTTACTGCTCCT 43308 || | | || ||| |||| ||||| | ||||| ||| Sbjct 164 GCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCT 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143517597992612