Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_020867.1
Length=44892
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 553 4e-153
seq7678 228 2e-55
>seq8857
Length=8770
Score = 553 bits (612), Expect = 4e-153
Identities = 722/994 (73%), Gaps = 4/994 (0%)
Strand=Plus/Minus
Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339
|||| || || ||||||||| | || ||| | ||||| ||||| |||| ||||||
Sbjct 6439 TGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTT 6380
Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397
||||| ||||||| |||| || | | | || || | ||| ||||| | || ||||
Sbjct 6379 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATCATAGCCTTCA 6322
Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457
||||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||| | || |
Sbjct 6321 TTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTT 6262
Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517
| || ||||| || ||||| |||||| | | |||| | || || || | || |
Sbjct 6261 ACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACT 6202
Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577
| ||| | || |||||||| | |||| |||||| | |||||||| || ||||||
Sbjct 6201 TTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATG 6142
Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637
|||| | || | |||||| | | ||| | | |||| |||| || || |||||||
Sbjct 6141 AGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAAC 6082
Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697
| | ||| || || ||| | || ||||| |||||| || || || ||||| || |
Sbjct 6081 TGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAG 6022
Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757
| || ||||| || ||| | | || ||| |||| ||||| ||||| ||||| ||||
Sbjct 6021 CTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGC 5962
Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817
|||| |||||||| ||||| |||||||| ||| | || |||||||||||||| ||||| |
Sbjct 5961 CTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCC 5902
Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877
||||||| || || || ||| | ||||| || || ||||||||||| || | || |
Sbjct 5901 TTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTG 5842
Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937
||||||||||| | || || ||| | | | | ||||| || ||||| |||
Sbjct 5841 CTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTG 5782
Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997
||| | || ||||| |||||||||||||| || |||||||| ||||| || || ||||
Sbjct 5781 CTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATG 5722
Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACT 43057
|||| ||||| || | |||||||||||||| || || || ||| ||||| || |
Sbjct 5721 GTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATT 5662
Query 43058 TCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTA 43117
|||| | || |||||||||||| | || |||||||| ||| || | || | |||||||
Sbjct 5661 TCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTA 5602
Query 43118 TGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATG 43177
|||| || || || |||||||| || || || ||||| | ||||||| ||| || ||
Sbjct 5601 TGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTG 5542
Query 43178 TCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACG 43237
| || ||| || |||||||| | || || || |||||||| | || || ||||| |
Sbjct 5541 TAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATG 5482
Query 43238 AGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271
| || ||||| ||||||||||| || || || ||
Sbjct 5481 AACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448
>seq7678
Length=557
Score = 228 bits (252), Expect = 2e-55
Identities = 290/399 (73%), Gaps = 0/399 (0%)
Strand=Plus/Minus
Query 42910 GTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAG 42969
|| |||||||| || |||| |||| ||||| || || ||||||||||| ||||| ||
Sbjct 524 GTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTACAAGTTCGGACAAGAAGAA 465
Query 42970 GAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCG 43029
|| || || ||||| || || || || ||||||||||| ||| | ||||||||||| ||
Sbjct 464 GAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGGTTGATCTTCCAATACGCT 405
Query 43030 TCGTTTAATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATT 43089
|| || || || || || || |||||||||| | || || ||||| || | || ||
Sbjct 404 TCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCATGGCCAGTAATCGGTATC 345
Query 43090 TGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAAC 43149
||||| || || | || |||| || |||||||| ||| |||| || || ||||| |||
Sbjct 344 TGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTGAACGGATTCAACTTCAAC 285
Query 43150 CAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGT 43209
|||||| | | ||| ||| || |||||| ||||||||||||| | | || ||
Sbjct 284 CAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGGGCTGACGTAATCAACCGC 225
Query 43210 GCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTT 43269
|| ||| | || | || || ||||||||||| || || || |||||||| | || |
Sbjct 224 GCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCCTTAGACTTG 165
Query 43270 GCATCCGTGGAGGTTACTCCCGTGGCACTTACTGCTCCT 43308
|| | | || ||| |||| ||||| | ||||| |||
Sbjct 164 GCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCT 126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143517597992612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |