Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq8857 580 1e-160 seq7678 298 6e-76 >seq8857 Length=8770 Score = 580 bits (642), Expect = 1e-160 Identities = 709/966 (73%), Gaps = 6/966 (1%) Strand=Plus/Minus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| |||||| | || | || ||||| |||||| | ||||||||| | | | | | Sbjct 6408 CTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCG 6349 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 | || | || || | |||||||||||||| ||||| ||||| ||||||||||||| Sbjct 6348 CAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTC 6289 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 ||||||| || |||| ||||| | || || ||||| || ||||| ||||| || | | Sbjct 6288 GTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTC 6229 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATG 155230 ||| ||| || || ||| | ||||| ||||| || |||||||| ||| || |||||| Sbjct 6228 CTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATG 6169 Query 155231 AGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCA 155290 | ||||| |||||||||||||||| | || | || | |||||| | | || | Sbjct 6168 AATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAG 6109 Query 155291 CAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCT 155350 | ||| |||||| |||||||||| || |||||| || ||||| |||||||| Sbjct 6108 CTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTG 6049 Query 155351 GTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCG 155410 |||||| || || || || || | ||||| ||||| ||| | |||| || | | Sbjct 6048 CTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTG 5989 Query 155411 GTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGT 155470 ||||||| || ||||||| |||||||| || || ||||||||||| |||| |||| Sbjct 5988 GTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGA 5929 Query 155471 TCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAG 155530 | || ||||| || |||||||| |||||||||||||| || |||||| | || ||||| | Sbjct 5928 TTGTATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTG 5869 Query 155531 GTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAA 155590 |||| || ||||| || || || ||||||||| ||||| ||||| || ||| | | Sbjct 5868 GTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGA 5809 Query 155591 TCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAG 155650 || | |||||||| || | || ||| || | |||||||| ||||| ||||| |||| Sbjct 5808 TCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAG 5749 Query 155651 AAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCAT 155710 |||||||||| ||||| ||||||||||| || || || || | |||||||| |||||| Sbjct 5748 AAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAA 5689 Query 155711 CCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCT 155770 ||||||||||| | | | || |||||| | ||||| ||||| || || | || | Sbjct 5688 GTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTT 5629 Query 155771 GGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACC 155830 || |||||| | ||| | || ||||| ||||| | || |||||||| ||||| | Sbjct 5628 GGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATC 5569 Query 155831 AGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACC 155887 | |||||||| || |||| ||| || || ||| || || || || |||||| Sbjct 5568 AATCTGTAGTTGA---TAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACC 5512 Query 155888 GCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACC 155947 ||||| |||||||||||||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct 5511 GCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACC 5452 Query 155948 TTGCTG 155953 | |||| Sbjct 5451 TAGCTG 5446 >seq7678 Length=557 Score = 298 bits (330), Expect = 6e-76 Identities = 325/430 (76%), Gaps = 6/430 (1%) Strand=Plus/Minus Query 155562 GCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAA 155621 ||||||||| ||||| || || || | | |||||||| || || || || || || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 155622 CTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATA 155681 ||| ||||||||||||||||||||||||||||| || ||||| || ||||| || || || Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 155682 CTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGT---CTTCACTT 155738 ||| ||||| | |||||||| || || |||||||||||| || || || ||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAAC---AGCCGTTCACTGCACTT 376 Query 155739 CTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGAT 155798 |||| | ||||||||||| || || | |||||| || ||| | ||| | || || Sbjct 375 CTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAAT 316 Query 155799 GGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGTGGTAAAGT 155858 ||| |||||||| ||||| |||||||||||||| || ||| | || || ||| || Sbjct 315 GGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGT 256 Query 155859 CATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGA 155918 |||| |||| ||||| ||| | | ||||||||| | ||||||||||| |||||||| Sbjct 255 CATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGA 196 Query 155919 GCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGAGTCAGTGCCTGTTGCACT 155978 ||||||||||||||||||||| | ||| | ||||||| ||| | ||||| || | Sbjct 195 GCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTT 136 Query 155979 TACTGCACCT 155988 ||||||||| Sbjct 135 AACTGCACCT 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584769998185640