Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq8857 479 8e-131 seq7678 282 1e-71 >seq8857 Length=8770 Score = 479 bits (530), Expect = 8e-131 Identities = 701/986 (71%), Gaps = 4/986 (0%) Strand=Plus/Plus Query 40532 AGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACT 40591 ||||| ||||||||| ||||| ||||| ||||| || ||||| ||||||||||| || | Sbjct 5447 AGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 5506 Query 40592 CTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGA 40651 | ||||| | |||||| || ||| ||| || ||| | | || ||||| || Sbjct 5507 AGCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAGA 5566 Query 40652 CTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAG 40711 || || || || |||||||| | || |||||||||||| ||||| | | |||| Sbjct 5567 TTGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAAA 5626 Query 40712 CCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAA 40771 ||| || || ||||| || ||||| | | ||||| |||| | ||| |||||||| Sbjct 5627 CCAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGAA 5686 Query 40772 TGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGT 40831 |||||||| || || | || ||||| ||||| || |||||||| || |||||||| Sbjct 5687 ACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAGT 5746 Query 40832 CTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCG 40891 || | || ||||| || || || || | || |||||| |||| || || |||| Sbjct 5747 TTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCT 5806 Query 40892 AATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGAC 40951 || | ||||| || | | || ||||||||| ||| | | |||||||| || Sbjct 5807 GATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATAC 5866 Query 40952 GCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGAC 41011 || || || || | ||| || ||||||||||| || ||||||||||| || ||||| || Sbjct 5867 ACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATAC 5926 Query 41012 AAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTG 41071 || ||| |||||||| || ||| || |||| ||||||||||||||| || || || Sbjct 5927 AATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTTG 5986 Query 41072 ACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCAC 41131 ||| | ||| |||| ||||| ||||| ||| |||| | ||||||| || || || Sbjct 5987 ACCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCAAC 6046 Query 41132 AAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATGC 41191 | ||||| || | |||||| || | | | |||||||||| | ||| ||| Sbjct 6047 AGCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAACA 6106 Query 41192 TGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCA 41251 ||||| |||| ||| ||||| | ||||| || | ||| || || || ||||||| ||| Sbjct 6107 AGCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCA 6166 Query 41252 CTCGTCCAGTG-TGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGC 41310 || || | | |||| |||||||| ||||| || || || | ||||| || ||| Sbjct 6167 TTCATCAACAGATGCC-GCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAG 6225 Query 41311 TCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCT 41370 | |||| | || || || ||||||||||| ||||| | || || || ||||| || | Sbjct 6226 TAGGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTT 6285 Query 41371 CACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTG 41429 |||| || ||||| |||||||| || || || || || ||||| || || || ||| | Sbjct 6286 CACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACA-GAA 6344 Query 41430 GTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTG 41489 || || || | ||| | || ||||| | ||||||||||| || | ||| |||||||| Sbjct 6345 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTT 6404 Query 41490 TCGGTGCTAGTGACCCAGTTACAAAA 41515 || ||||| || | ||||||||| || Sbjct 6405 TCAGTGCTGGTTATCCAGTTACAGAA 6430 >seq7678 Length=557 Score = 282 bits (312), Expect = 1e-71 Identities = 300/392 (77%), Gaps = 3/392 (1%) Strand=Plus/Plus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||| ||| ||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct 154 TCACCAGCAGCCAAGTCTAAGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATA 213 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT 40643 || | | | ||| | || ||||||||||||| ||||| ||| | || || Sbjct 214 CCCAAGTTAGCGCGGTTGATTACGTCAGCCCAAGTAGCGATGACGCGACCTTGAGAATCG 273 Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATG 40703 | |||||| ||||| ||||| || || || ||||| || ||||| || ||||| | Sbjct 274 ATTACTGATTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATTGTGCTGATACCTAAA 333 Query 40704 GAGGTAAGCCATATGCCAATAACCGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCT 40762 | ||||| ||| || || || || || | ||| ||||| |||||||| || | |||||| Sbjct 334 GCGGTAAACCAGATACCGATTACTGGCCATGCAGCCAAG-AAGAAGTGCAGTGAACGGCT 392 Query 40763 ATTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGAT 40822 |||||||| ||||| ||||| || || | | ||||||||||||||||||||||||||| Sbjct 393 GTTGTTGAAGGAAGCGTATTGGAAGATCAACCGACCAAAGTAACCGTGTGCAGCTACGAT 452 Query 40823 GTTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGT 40882 ||| || || || |||| || || ||||| || |||||||| |||||||| ||||| || Sbjct 453 GTTGTAGGTTTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTTTGTGATTCGGTTTCTGT 512 Query 40883 GGTCTCCCGAATGATTGAGGAAGTAA-CAAGG 40913 ||| || || | | |||||||||| ||||| Sbjct 513 GGTTTCACGTACCAAGGAGGAAGTAACCAAGG 544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143687180029746