Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq8857 583 1e-161 seq7678 280 2e-70 >seq8857 Length=8770 Score = 583 bits (646), Expect = 1e-161 Identities = 721/985 (73%), Gaps = 6/985 (1%) Strand=Plus/Plus Query 67360 CAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTC 67419 |||| ||||| ||||||||||| ||||| ||||| || |||||||||||||| ||||| Sbjct 5446 CAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGT 5505 Query 67420 CTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAACGA 67476 || | ||||| ||| || || || ||| ||| || || |||| ||||| | Sbjct 5506 TAGCGCGGTTAATGATATCAGCTCAGGTATTAATTAC---ACGACCTTGACTATCAACTA 5562 Query 67477 CGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAG 67536 | ||||| ||||| |||||||| || | ||||| |||||||| | ||| | |||| Sbjct 5563 CAGATTGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAG 5622 Query 67537 TGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGT 67596 | ||||| || | || || || | ||||| | |||||| || | | | ||||||| Sbjct 5623 TAAACCAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGT 5682 Query 67597 TGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGT 67656 ||||| |||||| ||||||||||| || || || || ||||||||||| ||||| || | Sbjct 5683 TGAAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTAT 5742 Query 67657 AAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTT 67716 |||| ||||| ||||| ||||| |||||||| | || || || | || ||||||| Sbjct 5743 AAGTTTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTT 5802 Query 67717 CTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGA 67776 | ||||| | | |||||| || | ||||| |||||||||||||| || || ||||| | Sbjct 5803 CCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAA 5862 Query 67777 ATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGA 67836 ||||||| ||||| || | ||| || ||||||||||||||||||||||| || || |||| Sbjct 5863 ATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGA 5922 Query 67837 ACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAAC 67896 | || | ||| |||| |||||||||||||| || |||||||| | ||||| || | Sbjct 5923 ATACAATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTC 5982 Query 67897 CTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATG 67956 ||||||| | || || | |||||| ||||| || || | || ||||| || || | Sbjct 5983 CTTGACCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACG 6042 Query 67957 CTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAGT 68016 | ||| |||||||| |||||||| |||||| || |||||||||| |||||| || Sbjct 6043 CAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGT 6102 Query 68017 ATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATACA 68076 | | | || | | |||||| | || | || | |||| |||||||| || | Sbjct 6103 AACAAGCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATA 6162 Query 68077 ACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTG 68136 |||| ||||| | || ||| |||||||| || ||||| ||||| | |||||| || | Sbjct 6163 ACCATTCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAG 6222 Query 68137 AACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACAG 68196 || |||||| || ||||| || || || ||||| ||||| | | || || | ||||| Sbjct 6223 AAGTAGGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAG 6282 Query 68197 GTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAAG 68256 |||| | |||||||| ||||| |||||||| || |||||||| || ||||| || || Sbjct 6283 GTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAG 6342 Query 68257 TTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCGAT 68316 | ||| | | ||| ||| |||||||| ||||| ||||| |||| || | ||| | Sbjct 6343 AAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGT 6402 Query 68317 TGTCAACTGAGGTGACCCAGTTACA 68341 | ||| ||| | ||||||||| Sbjct 6403 TTTCAGTGCTGGTTATCCAGTTACA 6427 >seq7678 Length=557 Score = 280 bits (310), Expect = 2e-70 Identities = 323/431 (75%), Gaps = 8/431 (2%) Strand=Plus/Plus Query 67325 AGGTGCAGTAAGTGCAACAGGCACAGACTCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTG 67384 ||||||||| | || ||||| || ||| ||||||| | ||| | ||||||||||| Sbjct 126 AGGTGCAGTTAAAGCCACAGGAGCAACTTCACCAGCAGCCAAGTCTAAGGGGAAGTTGTG 185 Query 67385 AGCGTTACGCTCGTGCATAACTTCCATTCC-AAGTCCTGCTCTGTTAAGGATGTCTGCCC 67443 |||||||||||||||||| |||||||| || |||| || | ||| | | ||| |||| Sbjct 186 AGCGTTACGCTCGTGCATGACTTCCATACCCAAGTTA-GCGCGGTTGATTACGTCAGCCC 244 Query 67444 AAGTAGGAATCACTTTACCACCTGCGTCAACGACGGATTGGTTGAAGTTGAAACCGTTGA 67503 |||||| || || ||| | || | || ||||||||||||||||| ||||| | Sbjct 245 AAGTAGCGATGACGCGACCTTGAGAATCGATTACTGATTGGTTGAAGTTGAATCCGTTCA 304 Query 67504 GGTTGAATGCCATAGTTGACACACCCATTGCAGTGAACCAGATGCAGACCACAGGGAATG 67563 ||||||| ||||| || | ||| | || || |||||||| | || || || ||| Sbjct 305 GGTTGAACGCCATTGTGCTGATACCTAAAGCGGTAAACCAGATACCGATTACTGGCCATG 364 Query 67564 CAGCAAGGAAGAAGTGAAG---ACTTCTTGAGTTGTTGAAAGATGCATACTGGAAGATCA 67620 |||| | ||||||||| || || || ||||||||| || || || |||||||||| Sbjct 365 CAGCCAAGAAGAAGTGCAGTGAACGGCT---GTTGTTGAAGGAAGCGTATTGGAAGATCA 421 Query 67621 AGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGTCCGAACT 67680 | ||||| ||||| || || ||||| || |||||||| || ||||||||||||||||||| Sbjct 422 ACCGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAGGTTTCTTCTTCTTGTCCGAACT 481 Query 67681 TGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATAAGAGAAGAAGTAACAA 67740 ||||||||||||| ||||| || || || ||||| | | | || |||||||| | Sbjct 482 TGTAACCGTAGTTTTGTGATTCGGTTTCTGTGGTTTCACGTACCAAGGAGGAAGTAACCA 541 Query 67741 GAGAACCGTGC 67751 ||||||||| Sbjct 542 AGGAACCGTGC 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566883992474040