Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq8857 661 0.0 seq7678 361 6e-95 seq7307 277 2e-69 seq7318 239 5e-58 >seq8857 Length=8770 Score = 661 bits (732), Expect = 0.0 Identities = 730/967 (75%), Gaps = 4/967 (0%) Strand=Plus/Plus Query 67841 CAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAAC 67900 |||| ||||| ||||||||||| || || ||||| |||||||||||||||||||| | Sbjct 5446 CAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGT 5505 Query 67901 CAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATAG 67960 ||||||||| | | || || |||||| | || ||| |||||||| | || Sbjct 5506 TAGCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAG 5565 Query 67961 ACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGA 68020 | || ||||| ||||||||||| | ||||| ||||| || |||| ||| | ||||| | Sbjct 5566 ATTGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAA 5625 Query 68021 ACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGA 68080 |||| ||||| | || ||||| ||||| | |||||| || | ||||| |||||||||| Sbjct 5626 ACCAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGA 5685 Query 68081 ACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAG 68140 | |||||| |||||||||| || || || || ||||| ||||| ||||| || |||| Sbjct 5686 AACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAG 5745 Query 68141 TCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCAC 68200 | ||||| ||||||||||| |||||||| | || || ||| |||| || ||||| | Sbjct 5746 TTTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCC 5805 Query 68201 GAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATA 68260 | || |||||| |||| |||||||||||| ||||| || || || |||||||||| Sbjct 5806 TGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATA 5865 Query 68261 CGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAACA 68320 | ||||| || || | ||| || || |||||||| ||||||||||| || || ||||| | Sbjct 5866 CACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATA 5925 Query 68321 CCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTT 68380 | | ||| |||||||||||||||||||||| |||||||| | ||||| || |||| Sbjct 5926 CAATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTT 5985 Query 68381 GACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAA 68440 |||| | || || | || ||| || || | || ||||||||||| || || || |||| Sbjct 5986 GACCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCAA 6045 Query 68441 CACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTATG 68500 || |||||||| |||||||| ||||| | |||||||| ||||| |||||||| Sbjct 6046 CAGCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAAC 6105 Query 68501 CAAAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAACC 68560 | | ||| | | |||||| | | | || | |||||||||||||||| |||| Sbjct 6106 AAGCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACC 6165 Query 68561 ACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAAC 68620 | ||||||| | ||| |||||||| || ||||||||||| | ||| || || ||| Sbjct 6166 ATTCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAG 6225 Query 68621 TAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGTT 68680 |||||| || ||||| || || || ||||| || || || | || |||| |||||||| Sbjct 6226 TAGGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTT 6285 Query 68681 CACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGATG 68739 ||||||||||||| || || || || |||||||| |||||||| | ||| || ||||| Sbjct 6286 CACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGA-A 6344 Query 68740 GTTGCTG-CAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGGTT 68798 ||||| | ||| || ||||||||||||| || || ||||| |||| |||||||||||| Sbjct 6345 GTTGCGGTCAATAAG-GTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTT 6403 Query 68799 CTCTGTG 68805 || ||| Sbjct 6404 TTCAGTG 6410 >seq7678 Length=557 Score = 361 bits (400), Expect = 6e-95 Identities = 340/433 (79%), Gaps = 0/433 (0%) Strand=Plus/Plus Query 67800 GATAGCGGGTGCCGTCAGTGCCACGGGTGTGGACTCAGCAGCAGCAAGGTCGAGAGGGAA 67859 ||| || ||||| || | ||||| || | ||| ||||||| | ||| | ||||| Sbjct 120 GATTGCAGGTGCAGTTAAAGCCACAGGAGCAACTTCACCAGCAGCCAAGTCTAAGGGGAA 179 Query 67860 GTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACCAGCGCGGTTGAGAACGTC 67919 |||||| ||||||||||| ||||| |||||||||||||| ||||||||||| ||||| Sbjct 180 GTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAAGTTAGCGCGGTTGATTACGTC 239 Query 67920 TGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATAGACTGGTTGAAGTTGAAACC 67979 ||||| |||| | || ||| | ||| | | || |||||||||||||| || Sbjct 240 AGCCCAAGTAGCGATGACGCGACCTTGAGAATCGATTACTGATTGGTTGAAGTTGAATCC 299 Query 67980 ATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAACCAGATACCAACGACAGG 68039 ||||||||||| ||||| ||||| | ||| | || || ||||||||||| | || || Sbjct 300 GTTCAGGTTGAACGCCATTGTGCTGATACCTAAAGCGGTAAACCAGATACCGATTACTGG 359 Query 68040 CCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGATGCATACTGGAAGAT 68099 ||||||||| | |||||||||||| |||||| ||||||||| || || || |||||||| Sbjct 360 CCATGCAGCCAAGAAGAAGTGCAGTGAACGGCTGTTGTTGAAGGAAGCGTATTGGAAGAT 419 Query 68100 CAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGACCGAA 68159 || ||||| ||||| || |||||||| || |||||||| || ||||||||||| ||||| Sbjct 420 CAACCGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAGGTTTCTTCTTCTTGTCCGAA 479 Query 68160 CTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGAACCAGTGAAGAAGTAAC 68219 ||||||||| ||||| || || || ||||| ||||||||||| |||| || |||||||| Sbjct 480 CTTGTAACCGTAGTTTTGTGATTCGGTTTCTGTGGTTTCACGTACCAAGGAGGAAGTAAC 539 Query 68220 CAGGGAACCATGC 68232 || |||||| ||| Sbjct 540 CAAGGAACCGTGC 552 >seq7307 Length=548 Score = 277 bits (306), Expect = 2e-69 Identities = 345/473 (73%), Gaps = 0/473 (0%) Strand=Plus/Minus Query 66585 TATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGT 66644 ||||| || || |||||||| || ||||| || |||||||||||||| | ||| || || Sbjct 475 TATTAGAGAGCGTTACCACGAGGTAGAACCTCCTCTGGGAATACAAATTGTTCGTGAGGC 416 Query 66645 TGATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAG 66704 ||||| ||| |||| ||| || || | ||| || |||| | |||||| || || ||| Sbjct 415 TGATCTTGAGGAGCCATCCAAGCGCGGATACCCTCGTTCAGCAAAATGTTTTTGGTATAG 356 Query 66705 AACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCA 66764 || || || || ||||||||||||||||| | | ||||||||||| ||||| ||||| Sbjct 355 AATGTTTCAAATTCTGGGTCTTCTGCTGCCCGCAATTCTTGGGATACGAAGTCGTAAGCC 296 Query 66765 CGAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGA 66824 || ||||| | || | ||| | || || | || |||| | || | || || Sbjct 295 CGGAGGTTCAATGCTAAACCCACGATTCCTACTGACGCCATCCACAAGCCTGTGACTGGT 236 Query 66825 ACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGA 66884 ||||||| ||| ||||| || ||||||| || ||| || || ||||| || ||||| Sbjct 235 ACAAACAGCATGAAGAAGTGTAACCACCGTTTGTTGGAGAAGGCGATACCGAATATCTGT 176 Query 66885 GACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAAT 66944 |||||||| ||||| || || ||||| ||||| |||||||| |||| || ||| ||| Sbjct 175 GACCAGAATCGGTTCGCTGTCACCATGGAGTAGGTTTCTTCTGCTTGGGTGTAGTTGAAG 116 Query 66945 GCTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCA 67004 || ||| || || | | |||||| |||||| | | || || |||||||| | || Sbjct 115 GCGCGGAAGGTTTTGGATGCTTCACCGTCTTCAAATAAGGTGTTTTCTACTGTGGCTCCG 56 Query 67005 TGAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATG 67057 ||||||||| | | | || ||||| || | ||| ||||| |||||||| || Sbjct 55 TGAATGGCACACAATAGCGCTCCACCGAGTACACCCGCTACTCCCATCATGTG 3 >seq7318 Length=447 Score = 239 bits (264), Expect = 5e-58 Identities = 257/340 (76%), Gaps = 0/340 (0%) Strand=Plus/Minus Query 66883 GAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGA 66942 ||||| |||||||| ||||| |||||||| ||||||||||| ||||||| | || | Sbjct 340 GAGACAGAAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAA 281 Query 66943 ATGCTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACAC 67002 | || ||| || ||||| |||||||||||| | | |||||| ||||| || ||| Sbjct 280 AAGCCCGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACCGTCGCAC 221 Query 67003 CATGAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACG 67062 ||||||| || | |||| || | |||| | ||| || || |||||||||||||| | Sbjct 220 CATGAATAGCGCATAGCAGGGCGGCGCCCAATACACCGGCAACTCCCATCATATGAAATG 161 Query 67063 GGTTCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGA 67122 ||||||||||||| ||||| || ||||| | || || | ||| ||||| || |||| | Sbjct 160 GGTTCAAGGTCCAATTATGAAACCCTTGAAAAAATAGGATGAAGCGAAATATAGCTGCTA 101 Query 67123 CCCCGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACAC 67182 | || ||| || || |||||||||| | |||||||| || || || ||||| ||| Sbjct 100 CACCAAAACTAGGCGCAAAAAACCAACCAGCCTGACCCAGTGGATAAATTAGAAATACAG 41 Query 67183 TAACAAAAACAGCGATAGGACCAGAGAACGCAATAGCATT 67222 |||||||||||| || |||||||| || || || ||||| Sbjct 40 AAACAAAAACAGCAATTGGACCAGAAAATGCGATTGCATT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571990623085080