Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq1626 174 3e-38
seq4029 161 2e-34
seq6788 150 3e-31
seq3221 147 4e-30
seq3668 145 1e-29
seq4535 143 5e-29
seq2811 131 3e-25
seq4845 127 4e-24
seq2421 120 5e-22
seq3706 89.7 9e-13
>seq1626
Length=97905
Score = 174 bits (192), Expect = 3e-38
Identities = 173/224 (77%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || |||||||||||||| | || || ||| || ||
Sbjct 62558 ATGATACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAG 62617
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || || | || |||| |||||||| ||||||||||| || ||||| |||||||||
Sbjct 62618 TCGGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 62677
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || |||||||| ||||| || || ||| ||||| || || || || |||
Sbjct 62678 GGTGGGATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGAT 62737
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
|| ||||||||||| |||||||||||||| || || |||| |||
Sbjct 62738 TCAACTTCTAGAGTGATGGTTTTACCAGTCAAAGTCTTAACGAA 62781
>seq4029
Length=108955
Score = 161 bits (178), Expect = 2e-34
Identities = 179/239 (75%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || |||||||| | ||| || || ||
Sbjct 14304 TTCTTACCACCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTG 14245
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || |||| |||||||| ||||||||||| || ||||| ||||||
Sbjct 14244 TAGTCAGACAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 14185
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| || ||| || ||||| ||||| |||||
Sbjct 14184 TCAGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAA 14125
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||| || ||||| || ||||| ||||| || || | ||| || ||||| ||
Sbjct 14124 GATTCAACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 14066
>seq6788
Length=110522
Score = 150 bits (166), Expect = 3e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || |||||||||||||| | || || ||||| ||
Sbjct 41405 ATGATACCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAG 41346
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || || | || |||| |||||||| ||||||||||| |||||||| |||||||||
Sbjct 41345 TCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCA 41286
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
|| || || ||||| || ||||| || || || ||||| || || || || |||
Sbjct 41285 GGAGGAATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGAT 41226
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054
|| ||||| | ||| ||||| |||||||| || |||||
Sbjct 41225 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTT 41188
>seq3221
Length=90415
Score = 147 bits (162), Expect = 4e-30
Identities = 167/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || || ||||||||||| | || || || || ||
Sbjct 28379 ATGATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAG 28320
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| |||| || || |||| |||||||| ||||||||||| || ||||| |||||||||
Sbjct 28319 TCAGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 28260
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || || || ||||| || || || || |||
Sbjct 28259 GGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGAT 28200
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
|| ||||| | ||| ||||| |||||||| || || |||| |||
Sbjct 28199 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 28156
>seq3668
Length=38538
Score = 145 bits (160), Expect = 1e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || ||||| || ||||| | ||||| ||| || ||
Sbjct 7882 ATGATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAG 7941
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || || | || |||| |||||||| ||||||||||| || ||||| |||||||||
Sbjct 7942 TCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 8001
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || || || ||||| ||||| || || |||
Sbjct 8002 GGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGAT 8061
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054
|| ||||| | ||| ||||| |||||||| || || ||
Sbjct 8062 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTT 8099
>seq4535
Length=12927
Score = 143 bits (158), Expect = 5e-29
Identities = 175/239 (73%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || |||| ||||| || || || ||
Sbjct 8325 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTG 8266
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || |||||||| ||||||||||| || ||||| ||||||
Sbjct 8265 TAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 8206
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| || || || ||||| ||||| || ||
Sbjct 8205 TCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAA 8146
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||| || ||||| || ||||| ||||| || || | ||| || ||||| ||
Sbjct 8145 GATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8087
>seq2811
Length=58406
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || | ||||| || || ||| || |||||
Sbjct 27194 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCA 27253
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || |||| |||| ||| ||||| |||||||| ||||| ||||| || ||
Sbjct 27254 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGA 27313
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| |||||| |||| || || ||||| || || |||||
Sbjct 27314 GGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 27373
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| ||||| || || || || || |||| ||||| | ||| || |||||
Sbjct 27374 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27423
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || | ||||| || || || || || ||
Sbjct 27422 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 27481
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || |||| || | || ||||| ||||| || ||||| ||||| || ||
Sbjct 27482 GACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 27541
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| ||||| || || || || || || || |||||
Sbjct 27542 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTGTCGGAAGATTCA 27601
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||| || ||||||||||| || || || || | ||| ||||||||
Sbjct 27602 ACCTCTAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27651
>seq4845
Length=48244
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| |||| || || || || | ||||| ||| || || ||||| |||
Sbjct 16286 ATACCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCT 16345
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || | || |||| ||| |||||||||||||| | ||| |||||||| ||
Sbjct 16346 GACAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGA 16405
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || || || || || || || || || ||
Sbjct 16406 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCG 16465
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||| || ||||| |||||||| | ||| || | ||| || |||||
Sbjct 16466 ACCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 16515
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| |||| || || || || | ||||| ||| || || ||||| |||
Sbjct 16514 ATACCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCT 16573
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || | || |||| ||| |||||||||||||| | ||| |||||||| ||
Sbjct 16574 GACAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGA 16633
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || || || || || || || || || ||
Sbjct 16634 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCG 16693
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||| || ||||| |||||||| | ||| || | ||| || |||||
Sbjct 16694 ACCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 16743
Score = 122 bits (134), Expect = 2e-22
Identities = 171/239 (72%), Gaps = 2/239 (1%)
Strand=Plus/Plus
Query 171831 AGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATA 171890
||||| || | |||||||| |||| || || || || | ||||| ||| || ||
Sbjct 16051 AGTTTAAT--TGCCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATG 16108
Query 171891 TTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGT 171950
||||| ||||| |||| || | || |||| ||| |||||||||||||| | ||| |||
Sbjct 16109 TTATAGTCTGACAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGT 16168
Query 171951 TGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCT 172010
||||| || || || ||||| || ||||| || || || || || || || ||
Sbjct 16169 TGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCA 16228
Query 172011 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || |||| || ||||| |||||||| | ||| || | ||| || |||||
Sbjct 16229 GAAGACTCGACCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 16287
>seq2421
Length=19268
Score = 120 bits (132), Expect = 5e-22
Identities = 335/505 (66%), Gaps = 13/505 (3%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| ||||||||| | |||||||| ||||| || || || | || || ||
Sbjct 3672 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTT 3731
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAA 38950
| ||| ||||| || || |||| | || || ||||| | | || | | | || ||
Sbjct 3732 TCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT-TGTTACCGAAAGCAACCAA 3790
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
| ||| ||||| || || ||||| ||||| |||||| ||| |||||||| | ||
Sbjct 3791 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAA 3850
Query 39011 TTTAAATGGTAATGCATCATCAATAAAT-TCttt-ttctatttctacagcttgtttaatt 39068
|| |||||| || || ||| || | ||||| ||| ||||| ||||| | | |
Sbjct 3851 AGCAACTGGTAAGGCGTC--CAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACA 3908
Query 39069 atcataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAAC 39126
|| | || | || | | | ||| | || | ||| || | | || |
Sbjct 3909 ATTTT--TTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATGG---GCGAACAACAAGC 3963
Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186
||||||| || || || ||||||||||| ||| | || ||||| || ||| ||||| |
Sbjct 3964 ATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAAC 4023
Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246
| ||||| | ||||||||||| | ||| || || || ||||| || || || || |
Sbjct 4024 CGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGA 4083
Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306
||| || | | ||||| || | || |||| | ||||||| | | | ||| ||
Sbjct 4084 CACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAA 4143
Query 39307 TCCAATTTATGGCCCAATCTGCTTT 39331
|||| ||| ||||| || || ||
Sbjct 4144 TCCATCTTAAAGCCCATTCGGCCTT 4168
>seq3706
Length=333
Score = 89.7 bits (98), Expect = 9e-13
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987
|||| ||||| || ||||| ||||| || || || || ||||| || ||||| |||||
Sbjct 1 TACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCG 60
Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047
|| || || || ||||| || ||||| ||||| | || ||||||||||| || |
Sbjct 61 ACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCA 120
Query 172048 ATGTTTTAATGAATATCTGCAT 172069
| || |||| || ||||||||
Sbjct 121 AAGTCTTAACAAAGATCTGCAT 142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905035088650200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |