Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq8857 567 8e-157 seq7678 356 3e-93 seq7307 262 4e-65 seq7318 203 4e-47 >seq8857 Length=8770 Score = 567 bits (628), Expect = 8e-157 Identities = 705/960 (73%), Gaps = 4/960 (0%) Strand=Plus/Minus Query 157607 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 157666 |||||||| || | || ||||| || || ||||||| || || | ||| | ||||| Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 6344 Query 157667 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 157725 ||||| || ||| | |||||| | |||||||| || || || || || || || ||||| Sbjct 6343 -TCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285 Query 157726 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 157785 ||| || |||| || | | || || ||||| || ||||| ||||| || | || | Sbjct 6284 ACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTAC 6225 Query 157786 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 157845 ||| || || ||| | ||||| ||||| || |||||||| ||||| ||||||| || Sbjct 6224 TTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATG 6165 Query 157846 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTATCTATGC 157905 | | || || |||||||||| | || | || | |||||| | | ||| | | Sbjct 6164 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTG 6105 Query 157906 ATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGT 157965 |||||||| |||||||||||||| | |||| | ||||||||||| ||||| ||| Sbjct 6104 TTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 6045 Query 157966 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCA 158025 || ||||| ||||| || || || || ||||||| ||| | | || || | ||||| Sbjct 6044 TGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCA 5985 Query 158026 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 158085 ||| || || |||| ||||||||| || || ||||||||||| |||| ||| |||| Sbjct 5984 AGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGT 5925 Query 158086 ATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGT 158145 |||||| || ||||||||||||||||||||||| || || ||| | ||||| ||||| || Sbjct 5924 ATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 5865 Query 158146 ATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTC- 158204 ||| ||||| || || || ||||||||| || | || ||||| | | | || Sbjct 5864 ATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGATCA 5806 Query 158205 GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAAGAGA 158264 | ||||| || |||| || || || | |||||||| ||||||||||||||||| | Sbjct 5805 GGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAA 5746 Query 158265 CCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCAT 158324 | ||||| || || || || ||||| || || || || |||||||||||||| || | Sbjct 5745 CTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTT 5686 Query 158325 TCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGT 158384 |||||||||| ||||| || || |||||| | ||||| ||||| ||| |||| || |||| Sbjct 5685 TCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGT 5626 Query 158385 TCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 158444 | || || | || | || ||||| ||||| | || |||||||| ||||| || | Sbjct 5625 TTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAAT 5566 Query 158445 CCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCTG 158504 | | ||||| |||| |||||||| | || ||||| || ||| | | ||||||||| Sbjct 5565 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTA 5506 Query 158505 GTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTG 158564 ||||||||||||||||||||||| ||||| || || |||||||| || ||||| |||| Sbjct 5505 ACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 356 bits (394), Expect = 3e-93 Identities = 331/420 (79%), Gaps = 0/420 (0%) Strand=Plus/Minus Query 158186 GTTACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAG 158245 ||||||||||| | || |||||||| || ||||| || ||||| ||||||||||||||| Sbjct 539 GTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTACAAG 480 Query 158246 TTCGGTCAAGAGGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTG 158305 ||||| ||||| ||||| ||||| |||||||| || ||||| || ||||| ||||| ||| Sbjct 479 TTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGGTTG 420 Query 158306 ATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGG 158365 ||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||| Sbjct 419 ATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCATGG 360 Query 158366 CCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAAC 158425 || || |||| |||||||| ||||| | || || ||| ||||| |||||||||||| Sbjct 359 CCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTGAAC 300 Query 158426 GGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCA 158485 || |||||||||||||| || | | ||| ||| ||||| || | || ||||| Sbjct 299 GGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGGGCT 240 Query 158486 GATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 158545 || ||| | ||||||||| | ||||||||||| ||||| ||||||||||| |||||| Sbjct 239 GACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCACAAC 180 Query 158546 TTCCCACTCGACCTTGCTGCTGCTGAGTCAACTCCTGTTGCACTTTCAGCACCTTCCATC 158605 ||||| | ||| | ||||||| ||| ||||||| || | | |||||| | ||| Sbjct 179 TTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCTGCAATC 120 >seq7307 Length=548 Score = 262 bits (290), Expect = 4e-65 Identities = 343/475 (72%), Gaps = 0/475 (0%) Strand=Plus/Plus Query 159838 TCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCG 159897 |||| ||||||||||| || ||| |||| |||||||| ||| | ||||||| || || | Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 159898 TTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTG 159957 || ||||| ||||| | | |||||| || ||| | | || ||||| || || Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120 Query 159958 ATTCAACTCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGA 160017 | | || |||| || || || ||||| ||||| || || ||||| |||||||| |||| Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180 Query 160018 TCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTG 160077 | |||||||| || || || ||||| |||||| | || ||||||||| ||||||| || | Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240 Query 160078 TTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTTAATCTTCGTGCTT 160137 | | || | |||| | || | || || | || | || | || || || |||| Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTT 300 Query 160138 ACGATTTCGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACA 160197 |||| |||||| ||||| | | ||||||||||| ||||||||||| || ||||| | Sbjct 301 ACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATA 360 Query 160198 CCAAAAACATCCTATTGAACGAAGGACTACGTGCATGGTTGGCACCTGCTGATCAACCCC 160257 |||||||||| | ||||||| || | || || ||| |||| ||| ||||| || | Sbjct 361 CCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTC 420 Query 160258 ATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAATA 160312 | ||| | ||| | |||||||| || || | ||| | || ||||| || ||||| Sbjct 421 ACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATA 475 >seq7318 Length=447 Score = 203 bits (224), Expect = 4e-47 Identities = 244/332 (73%), Gaps = 0/332 (0%) Strand=Plus/Plus Query 159675 AATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTCATCTACCCA 159734 ||||| || || || |||||||| |||||||||||||| || || || || || ||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 159735 TTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTC 159794 |||||||| | |||||||||| || || ||||| || ||||| || ||| | ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 159795 CTGTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCCATATGATGGGAGTT 159854 | | || ||||||| ||||| || ||||| || || || || ||||||||||||||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 159855 GCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTACTGTAGAGAACACA 159914 || ||| || | || | || || || | || || ||||| | || ||||| || || Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 159915 CTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCAACTCAAGAGGAG 159974 | | ||||||||| || |||||||| || ||| ||| | ||||||||| || Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 159975 GAGACTTACTCTATGGTCACTGCAAACCGCTT 160006 || ||||| || ||||||||||| |||||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548313263109080