Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_021530.1
Length=171407
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 567 8e-157
seq7678 356 3e-93
seq7307 262 4e-65
seq7318 203 4e-47
>seq8857
Length=8770
Score = 567 bits (628), Expect = 8e-157
Identities = 705/960 (73%), Gaps = 4/960 (0%)
Strand=Plus/Minus
Query 157607 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 157666
|||||||| || | || ||||| || || ||||||| || || | ||| | |||||
Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 6344
Query 157667 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 157725
||||| || ||| | |||||| | |||||||| || || || || || || || |||||
Sbjct 6343 -TCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285
Query 157726 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 157785
||| || |||| || | | || || ||||| || ||||| ||||| || | || |
Sbjct 6284 ACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTAC 6225
Query 157786 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 157845
||| || || ||| | ||||| ||||| || |||||||| ||||| ||||||| ||
Sbjct 6224 TTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATG 6165
Query 157846 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTATCTATGC 157905
| | || || |||||||||| | || | || | |||||| | | ||| | |
Sbjct 6164 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTG 6105
Query 157906 ATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGT 157965
|||||||| |||||||||||||| | |||| | ||||||||||| ||||| |||
Sbjct 6104 TTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 6045
Query 157966 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCA 158025
|| ||||| ||||| || || || || ||||||| ||| | | || || | |||||
Sbjct 6044 TGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCA 5985
Query 158026 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 158085
||| || || |||| ||||||||| || || ||||||||||| |||| ||| ||||
Sbjct 5984 AGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGT 5925
Query 158086 ATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGT 158145
|||||| || ||||||||||||||||||||||| || || ||| | ||||| ||||| ||
Sbjct 5924 ATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 5865
Query 158146 ATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTC- 158204
||| ||||| || || || ||||||||| || | || ||||| | | | ||
Sbjct 5864 ATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGATCA 5806
Query 158205 GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAAGAGA 158264
| ||||| || |||| || || || | |||||||| ||||||||||||||||| |
Sbjct 5805 GGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAA 5746
Query 158265 CCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCAT 158324
| ||||| || || || || ||||| || || || || |||||||||||||| || |
Sbjct 5745 CTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTT 5686
Query 158325 TCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGT 158384
|||||||||| ||||| || || |||||| | ||||| ||||| ||| |||| || ||||
Sbjct 5685 TCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGT 5626
Query 158385 TCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 158444
| || || | || | || ||||| ||||| | || |||||||| ||||| || |
Sbjct 5625 TTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAAT 5566
Query 158445 CCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCTG 158504
| | ||||| |||| |||||||| | || ||||| || ||| | | |||||||||
Sbjct 5565 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTA 5506
Query 158505 GTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTG 158564
||||||||||||||||||||||| ||||| || || |||||||| || ||||| ||||
Sbjct 5505 ACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTG 5446
>seq7678
Length=557
Score = 356 bits (394), Expect = 3e-93
Identities = 331/420 (79%), Gaps = 0/420 (0%)
Strand=Plus/Minus
Query 158186 GTTACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAG 158245
||||||||||| | || |||||||| || ||||| || ||||| |||||||||||||||
Sbjct 539 GTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTACAAG 480
Query 158246 TTCGGTCAAGAGGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTG 158305
||||| ||||| ||||| ||||| |||||||| || ||||| || ||||| ||||| |||
Sbjct 479 TTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGGTTG 420
Query 158306 ATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGG 158365
||||||||||||||||| ||||||||| |||||| ||||||||||| | |||||||||
Sbjct 419 ATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCATGG 360
Query 158366 CCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAAC 158425
|| || |||| |||||||| ||||| | || || ||| ||||| ||||||||||||
Sbjct 359 CCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTGAAC 300
Query 158426 GGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCA 158485
|| |||||||||||||| || | | ||| ||| ||||| || | || |||||
Sbjct 299 GGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGGGCT 240
Query 158486 GATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 158545
|| ||| | ||||||||| | ||||||||||| ||||| ||||||||||| ||||||
Sbjct 239 GACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCACAAC 180
Query 158546 TTCCCACTCGACCTTGCTGCTGCTGAGTCAACTCCTGTTGCACTTTCAGCACCTTCCATC 158605
||||| | ||| | ||||||| ||| ||||||| || | | |||||| | |||
Sbjct 179 TTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCTGCAATC 120
>seq7307
Length=548
Score = 262 bits (290), Expect = 4e-65
Identities = 343/475 (72%), Gaps = 0/475 (0%)
Strand=Plus/Plus
Query 159838 TCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCG 159897
|||| ||||||||||| || ||| |||| |||||||| ||| | ||||||| || || |
Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60
Query 159898 TTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTG 159957
|| ||||| ||||| | | |||||| || ||| | | || ||||| || ||
Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120
Query 159958 ATTCAACTCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGA 160017
| | || |||| || || || ||||| ||||| || || ||||| |||||||| ||||
Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180
Query 160018 TCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTG 160077
| |||||||| || || || ||||| |||||| | || ||||||||| ||||||| || |
Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240
Query 160078 TTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTTAATCTTCGTGCTT 160137
| | || | |||| | || | || || | || | || | || || || ||||
Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTT 300
Query 160138 ACGATTTCGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACA 160197
|||| |||||| ||||| | | ||||||||||| ||||||||||| || ||||| |
Sbjct 301 ACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATA 360
Query 160198 CCAAAAACATCCTATTGAACGAAGGACTACGTGCATGGTTGGCACCTGCTGATCAACCCC 160257
|||||||||| | ||||||| || | || || ||| |||| ||| ||||| || |
Sbjct 361 CCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTC 420
Query 160258 ATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAATA 160312
| ||| | ||| | |||||||| || || | ||| | || ||||| || |||||
Sbjct 421 ACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATA 475
>seq7318
Length=447
Score = 203 bits (224), Expect = 4e-47
Identities = 244/332 (73%), Gaps = 0/332 (0%)
Strand=Plus/Plus
Query 159675 AATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTCATCTACCCA 159734
||||| || || || |||||||| |||||||||||||| || || || || || |||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 159735 TTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTC 159794
|||||||| | |||||||||| || || ||||| || ||||| || ||| | |||
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 159795 CTGTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCCATATGATGGGAGTT 159854
| | || ||||||| ||||| || ||||| || || || || |||||||||||||||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 159855 GCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTACTGTAGAGAACACA 159914
|| ||| || | || | || || || | || || ||||| | || ||||| || ||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 159915 CTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCAACTCAAGAGGAG 159974
| | ||||||||| || |||||||| || ||| ||| | ||||||||| ||
Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300
Query 159975 GAGACTTACTCTATGGTCACTGCAAACCGCTT 160006
|| ||||| || ||||||||||| ||||||||
Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTT 332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548313263109080
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