Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq8857 601 4e-167 seq7678 385 5e-102 seq7307 255 6e-63 seq7318 233 2e-56 >seq8857 Length=8770 Score = 601 bits (666), Expect = 4e-167 Identities = 727/987 (74%), Gaps = 2/987 (0%) Strand=Plus/Minus Query 150838 CTTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTGCT 150897 ||| ||| ||||| | ||| ||| | ||||| || || | || ||||| ||||| | Sbjct 6431 CTTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTT 6372 Query 150898 GATGATTCCAACTCTGTTGGCAGCAACCATTTGCTTCATCGTGGCATTCATCGCTGCTCC 150957 |||||| || || | ||| | ||||| | || ||| | || ||||| |||||||| Sbjct 6371 GATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCC 6312 Query 150958 CCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACAA 151017 || || || || ||||| || |||||||| ||| |||| ||| || | ||||| ||||| Sbjct 6311 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAA 6252 Query 151018 CATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCAT 151077 || ||||| ||||| || ||||| ||||| ||||||||| ||||||| ||||| || Sbjct 6251 TATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAAT 6192 Query 151078 CTGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 151137 |||||||| || ||| | ||||||||| | ||||| |||||||||| | || |||| Sbjct 6191 ATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 6132 Query 151138 CTTCCACTTCCTGATTGGTATCTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTACCG 151197 | |||||| | | ||| | | ||||||||||||||||||||||||| || ||| Sbjct 6131 TCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCG 6072 Query 151198 CTTGGGTATGCGTCCCTGGATCTGC-GTTGCATACTCTGCTCCAGTTGCTGCTGCGAGTG 151256 |||||||||| || ||||| ||| ||||| || || ||||| ||||| ||||| | || Sbjct 6071 TCTGGGTATGCGCCCTTGGAT-TGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTG 6013 Query 151257 CAGTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTA 151316 | || ||| | | || || | |||||||| || ||||||| ||||| || || | Sbjct 6012 CTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCA 5953 Query 151317 TTTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCACC 151376 ||||||| || ||||||| ||| |||| ||||| || || |||||||| || ||||||| Sbjct 5952 TTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACC 5893 Query 151377 CCTTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCACG 151436 | || || ||| | ||||| |||||||| || ||||| || || || || ||||| | Sbjct 5892 CATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATG 5833 Query 151437 GTTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTATG 151496 |||| |||| |||||| || | | || || || ||||| || || || | | Sbjct 5832 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 5773 Query 151497 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTTG 151556 ||||||| ||||||||||| ||||| || || || || || || || || ||||| |||| Sbjct 5772 GTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 5713 Query 151557 GTCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCG 151616 | || | ||||||||||| || |||||||| || ||||| | || |||||| | | Sbjct 5712 GCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAG 5653 Query 151617 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCA 151676 | || ||||| ||| ||||||| ||||| ||||| | ||| | || || ||||| |||| Sbjct 5652 CTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 5593 Query 151677 ACCTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACA 151736 | | || |||||||| ||||| || || | | ||| |||| || || | || | Sbjct 5592 ATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 5533 Query 151737 CCTGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 151796 |||| || || | | ||||| || || ||||||||||||||||| || ||||||| Sbjct 5532 CCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 5473 Query 151797 CTCACAACTTCCCTCTCGACCTTGCTG 151823 |||| ||||||||||| ||||| |||| Sbjct 5472 CTCATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 385 bits (426), Expect = 5e-102 Identities = 345/433 (80%), Gaps = 0/433 (0%) Strand=Plus/Minus Query 151432 GCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAA 151491 ||||||||| |||||||||| || |||| ||||| ||||| |||| ||| || || || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 151492 CTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTA 151551 ||| |||||||||||||| ||||||||||| |||||||||||||| || ||||||||||| Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 151552 CTTTGGTCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTT 151611 ||||||||| | |||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 151612 CCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGC 151671 | | || |||||||| || ||||||||||||| || || | ||| ||||||| ||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 151672 ATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCT 151731 |||||||||||||| |||||||||||||| || | || ||| ||| || ||| | Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 151732 GAACACCTGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCG 151791 || ||||| ||||| | ||||| || ||||||||||||| ||||||||||| Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 151792 TAATGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGAGTCCACCCCTGTGGCACTCAC 151851 ||| |||||||||||||| | ||| | ||||||| ||| | |||||||| | || Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133 Query 151852 CGCTCCTTCCATC 151864 || ||| | ||| Sbjct 132 TGCACCTGCAATC 120 >seq7307 Length=548 Score = 255 bits (282), Expect = 6e-63 Identities = 342/476 (72%), Gaps = 0/476 (0%) Strand=Plus/Plus Query 152905 CATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCATGGTGTT 152964 || |||||||| || || ||| | | || || || | | | ||||||||| || | Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62 Query 152965 ACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAGCTTTCGAC 153024 |||||||| || || || | | |||| |||||| | | || || ||| || ||| || Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCAAC 122 Query 153025 AGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATA 153084 ||| |||| |||||| ||||| || ||||| || || ||||| |||||||| |||||| Sbjct 123 TACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGATA 182 Query 153085 TTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTT 153144 || || || || || ||| ||||| ||| | || ||||| |||||||||||||| || Sbjct 183 TTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAGTC 242 Query 153145 ATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTAC 153204 | || | |||| | || | |||||| | ||| | || | || || || |||||| Sbjct 243 ACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTTAC 302 Query 153205 GATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACG 153264 || || ||||| |||||| | |||| ||||||| || |||||||| || |||||||| Sbjct 303 GACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATACC 362 Query 153265 AAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGACCAACCTCAT 153324 || || || | ||||||| ||| | || |||||| |||| ||| || || ||||| Sbjct 363 AAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTCAC 422 Query 153325 GAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCTGTGATATAC 153380 || | || || ||||| || ||||| | || || || |||||||| | ||| || Sbjct 423 GAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATAGAC 478 >seq7318 Length=447 Score = 233 bits (258), Expect = 2e-56 Identities = 254/336 (76%), Gaps = 1/336 (0%) Strand=Plus/Plus Query 152740 AATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCT 152799 ||||| || || || |||||||| || |||||||||||| || ||||| || || || Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 152800 CTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATCTTCCGATTC 152859 |||||||| | |||||||||| || || ||| || || ||||| || || || ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 152860 CTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGAATCCGTTTCATATGATGGGTGTT 152919 | || || ||||||| || || || ||||| ||||| || |||||||||||||| ||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 152920 GCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACT 152979 || ||| | ||||| | ||| |||| | || |||||||||| || ||||| |||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 152980 TTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAGCTTTCGACAGCACTCAAGAAGAA 153039 || | | |||||||||| ||||| || ||| ||||| || ||||||| ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 153040 GAGACCTATTCGATGGTTACTGCTAACCG-TTTCTG 153074 || || ||||| ||||| ||||||||||| |||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCTG 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549561123972680