Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq8857 515 5e-141 seq7678 268 1e-66 seq7307 251 8e-62 seq7318 102 9e-17 >seq8857 Length=8770 Score = 515 bits (570), Expect = 5e-141 Identities = 710/988 (72%), Gaps = 10/988 (1%) Strand=Plus/Minus Query 72235 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 72294 || ||| | ||| |||| |||||| || ||| | ||| |||| ||||||||||| || Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371 Query 72295 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 72353 |||||||| | ||| | || || || || || || |||| ||||| |||||||| Sbjct 6370 ATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCC 6312 Query 72354 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAA 72413 |||||| ||||| || || || | ||||| ||| | || ||||| | || || ||||| Sbjct 6311 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAA 6252 Query 72414 CATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCAT 72473 || ||||| ||||| | |||| |||| || || || || ||||| ||||| || Sbjct 6251 TATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAAT 6192 Query 72474 CTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGTTAGTTAT 72533 |||||||| || || | || || ||||| || || || |||||||| || || || | Sbjct 6191 ATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 6132 Query 72534 TTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAG 72593 | | |||||| | | || | || ||||||||| | |||||||||| | | | Sbjct 6131 TCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCG 6072 Query 72594 ACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGC 72653 || || ||| | |||||||| ||| || || ||||| ||||| | || || ||| Sbjct 6071 TCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGC 6012 Query 72654 AGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTAT 72713 || ||| | | || ||| | ||||| || || |||||||||||||| ||||| || Sbjct 6011 TGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCAT 5952 Query 72714 CTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCC 72773 || ||||| |||||||| ||| | || ||||| || ||||||||||| || |||||||| Sbjct 5951 TTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCC 5892 Query 72774 CTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGG 72833 || || ||| ||||||||| ||| | || ||||| || || ||||| ||||| || Sbjct 5891 ATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGG 5832 Query 72834 TTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCAAAACTACGG 72893 ||| | || ||||| | | ||||| || || ||||| || || | || | || Sbjct 5831 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 5772 Query 72894 CTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGG 72953 || || ||||| ||||| |||||||| ||||| ||||| ||||||||||| || || || Sbjct 5771 TTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGG 5712 Query 72954 TAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGC 73013 |||| |||||||| |||||| ||||||||||||||||| ||||| |||||| | || Sbjct 5711 CCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGC 5652 Query 73014 TGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGGCATTCAA 73073 || | || || || || | ||||| || | | ||||| |||| ||||| ||||| Sbjct 5651 TGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 5592 Query 73074 CCTTAACGGATTCAACTTCAACCAATCAGTTGTAGAT--GCAA--ACGGAAAGATTGTAC 73129 | || || ||||| ||||| ||||| || || ||| ||| || | | ||| Sbjct 5591 TTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 5532 Query 73130 CAACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAA 73189 | || | ||| | ||||| | || |||||||| |||||||||||||||||| | | Sbjct 5531 C----TGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTA 5476 Query 73190 ATGCACACAACTTCCCACTAGACCTAGC 73217 |||| || |||||||| ||||||||||| Sbjct 5475 ATGCTCATAACTTCCCTCTAGACCTAGC 5448 >seq7678 Length=557 Score = 268 bits (296), Expect = 1e-66 Identities = 319/433 (74%), Gaps = 0/433 (0%) Strand=Plus/Minus Query 72828 GCACGGTTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCAAAA 72887 ||||||||| | |||||||| || | | | || || ||||| | ||| ||||| Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 72888 CTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATA 72947 |||||| || ||||||||||||||||||||||| || ||||| || ||||| || || || Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 72948 CTTCGGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTT 73007 ||| ||| | || |||||||| || || || ||||||||| |||||| | |||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 73008 CCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGGC 73067 | | |||| || || ||| || || | ||||| ||| | | |||||| | |||||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 73068 ATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGT 73127 |||||||| |||||||||||||||||||||||||| | ||| | | || | | Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 73128 ACCAACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAG 73187 | || |||| || || | ||| | || ||| | || |||||||| ||||| || | Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 73188 AAATGCACACAACTTCCCACTAGACCTAGCATCTGCTGAGTCTACAACAGTTGCATTAAC 73247 || || ||||||||||| ||||| | || ||| ||| | | | || || ||||| Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133 Query 73248 TGCACCTTCAATC 73260 ||||||| ||||| Sbjct 132 TGCACCTGCAATC 120 >seq7307 Length=548 Score = 251 bits (278), Expect = 8e-62 Identities = 351/494 (71%), Gaps = 25/494 (5%) Strand=Plus/Plus Query 73910 CATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCA 73969 || |||||||| ||||| ||| |||| |||||||| || | |||||||| || || || Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62 Query 73970 ACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATTCAATCT 74029 |||||| | ||||| || | ||||||| ||||| ||| Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGG------------TGAAGC---------ATCC 101 Query 74030 ACAACTTTCAGAGCATTCGATCCTACAC--AGGAAGAAGAGACTTATAGTATGATTACTG 74087 | ||| ||| | || ||| | |||||| | | |||||| || || ||| | || | Sbjct 102 AAAACCTTCCGCGCCTTCAA--CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAG 159 Query 74088 CTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTACACT 74147 | ||| ||||||||||||||||||| ||||| || || || |||||| | | ||||||| Sbjct 160 CGAACCGATTCTGGTCACAGATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACT 219 Query 74148 TCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGGTC 74207 || | ||| |||| ||||| |||| || |||||| | || |||| ||||| ||| Sbjct 220 TCTTCATGCTGTTTGTACCAGTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTT 279 Query 74208 TAGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACC 74267 ||||| | ||||| | || |||||||| ||||| ||||| | | ||||||||||||| Sbjct 280 TAGCATTGAACCTCCGGGCTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACC 339 Query 74268 CAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGA 74327 |||| |||||||| ||||| || || |||||| | || || || ||||| | || |||| Sbjct 340 CAGAATTTGAAACATTCTATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGA 399 Query 74328 TGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCACGAG 74387 || | || ||||| || || || | ||||| |||||||| || || | || || | Sbjct 400 TGGCTCCTCAAGATCAGCCTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTG 459 Query 74388 GCAACGCACTATAA 74401 | ||||| || ||| Sbjct 460 GTAACGCTCTCTAA 473 >seq7318 Length=447 Score = 102 bits (112), Expect = 9e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 73790 TTTCTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCACCTTCATTCGGTGTCGCA 73849 |||||||| ||||| | || ||| | ||||||| || || ||| || ||||| ||| Sbjct 46 TTTCTAATTTATCCACTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCA 105 Query 73850 GCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCATTT 73909 || || ||||| | || |||| | || || || || ||| || | || |||||| Sbjct 106 GCTATATTTCGCTTCATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTT 165 Query 73910 CATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCA 73969 ||||||||||| || || ||| || | || | || | ||||| || || |||||||| Sbjct 166 CATATGATGGGAGTTGCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCG 225 Query 73970 ACAGTACAGAACACATTGTATGAAGA 73995 || ||| | || || || | |||||| Sbjct 226 ACGGTAGAAAATACTTTATTTGAAGA 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572809731754520