Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_021559.1
Length=179063
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 515 5e-141
seq7678 268 1e-66
seq7307 251 8e-62
seq7318 102 9e-17
>seq8857
Length=8770
Score = 515 bits (570), Expect = 5e-141
Identities = 710/988 (72%), Gaps = 10/988 (1%)
Strand=Plus/Minus
Query 72235 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 72294
|| ||| | ||| |||| |||||| || ||| | ||| |||| ||||||||||| ||
Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371
Query 72295 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 72353
|||||||| | ||| | || || || || || || |||| ||||| ||||||||
Sbjct 6370 ATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCC 6312
Query 72354 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAA 72413
|||||| ||||| || || || | ||||| ||| | || ||||| | || || |||||
Sbjct 6311 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAA 6252
Query 72414 CATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCAT 72473
|| ||||| ||||| | |||| |||| || || || || ||||| ||||| ||
Sbjct 6251 TATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAAT 6192
Query 72474 CTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGTTAGTTAT 72533
|||||||| || || | || || ||||| || || || |||||||| || || || |
Sbjct 6191 ATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 6132
Query 72534 TTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAG 72593
| | |||||| | | || | || ||||||||| | |||||||||| | | |
Sbjct 6131 TCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCG 6072
Query 72594 ACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGC 72653
|| || ||| | |||||||| ||| || || ||||| ||||| | || || |||
Sbjct 6071 TCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGC 6012
Query 72654 AGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTAT 72713
|| ||| | | || ||| | ||||| || || |||||||||||||| ||||| ||
Sbjct 6011 TGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCAT 5952
Query 72714 CTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCC 72773
|| ||||| |||||||| ||| | || ||||| || ||||||||||| || ||||||||
Sbjct 5951 TTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCC 5892
Query 72774 CTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGG 72833
|| || ||| ||||||||| ||| | || ||||| || || ||||| ||||| ||
Sbjct 5891 ATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGG 5832
Query 72834 TTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCAAAACTACGG 72893
||| | || ||||| | | ||||| || || ||||| || || | || | ||
Sbjct 5831 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 5772
Query 72894 CTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGG 72953
|| || ||||| ||||| |||||||| ||||| ||||| ||||||||||| || || ||
Sbjct 5771 TTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGG 5712
Query 72954 TAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGC 73013
|||| |||||||| |||||| ||||||||||||||||| ||||| |||||| | ||
Sbjct 5711 CCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGC 5652
Query 73014 TGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGGCATTCAA 73073
|| | || || || || | ||||| || | | ||||| |||| ||||| |||||
Sbjct 5651 TGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 5592
Query 73074 CCTTAACGGATTCAACTTCAACCAATCAGTTGTAGAT--GCAA--ACGGAAAGATTGTAC 73129
| || || ||||| ||||| ||||| || || ||| ||| || | | |||
Sbjct 5591 TTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 5532
Query 73130 CAACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAA 73189
| || | ||| | ||||| | || |||||||| |||||||||||||||||| | |
Sbjct 5531 C----TGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTA 5476
Query 73190 ATGCACACAACTTCCCACTAGACCTAGC 73217
|||| || |||||||| |||||||||||
Sbjct 5475 ATGCTCATAACTTCCCTCTAGACCTAGC 5448
>seq7678
Length=557
Score = 268 bits (296), Expect = 1e-66
Identities = 319/433 (74%), Gaps = 0/433 (0%)
Strand=Plus/Minus
Query 72828 GCACGGTTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCAAAA 72887
||||||||| | |||||||| || | | | || || ||||| | ||| |||||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 72888 CTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATA 72947
|||||| || ||||||||||||||||||||||| || ||||| || ||||| || || ||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 72948 CTTCGGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTT 73007
||| ||| | || |||||||| || || || ||||||||| |||||| | ||||||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 73008 CCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGGC 73067
| | |||| || || ||| || || | ||||| ||| | | |||||| | ||||||||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313
Query 73068 ATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGT 73127
|||||||| |||||||||||||||||||||||||| | ||| | | || | |
Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253
Query 73128 ACCAACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAG 73187
| || |||| || || | ||| | || ||| | || |||||||| ||||| || |
Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193
Query 73188 AAATGCACACAACTTCCCACTAGACCTAGCATCTGCTGAGTCTACAACAGTTGCATTAAC 73247
|| || ||||||||||| ||||| | || ||| ||| | | | || || |||||
Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133
Query 73248 TGCACCTTCAATC 73260
||||||| |||||
Sbjct 132 TGCACCTGCAATC 120
>seq7307
Length=548
Score = 251 bits (278), Expect = 8e-62
Identities = 351/494 (71%), Gaps = 25/494 (5%)
Strand=Plus/Plus
Query 73910 CATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCA 73969
|| |||||||| ||||| ||| |||| |||||||| || | |||||||| || || ||
Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62
Query 73970 ACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATTCAATCT 74029
|||||| | ||||| || | ||||||| ||||| |||
Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGG------------TGAAGC---------ATCC 101
Query 74030 ACAACTTTCAGAGCATTCGATCCTACAC--AGGAAGAAGAGACTTATAGTATGATTACTG 74087
| ||| ||| | || ||| | |||||| | | |||||| || || ||| | || |
Sbjct 102 AAAACCTTCCGCGCCTTCAA--CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAG 159
Query 74088 CTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTACACT 74147
| ||| ||||||||||||||||||| ||||| || || || |||||| | | |||||||
Sbjct 160 CGAACCGATTCTGGTCACAGATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACT 219
Query 74148 TCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGGTC 74207
|| | ||| |||| ||||| |||| || |||||| | || |||| ||||| |||
Sbjct 220 TCTTCATGCTGTTTGTACCAGTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTT 279
Query 74208 TAGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACC 74267
||||| | ||||| | || |||||||| ||||| ||||| | | |||||||||||||
Sbjct 280 TAGCATTGAACCTCCGGGCTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACC 339
Query 74268 CAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGA 74327
|||| |||||||| ||||| || || |||||| | || || || ||||| | || ||||
Sbjct 340 CAGAATTTGAAACATTCTATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGA 399
Query 74328 TGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCACGAG 74387
|| | || ||||| || || || | ||||| |||||||| || || | || || |
Sbjct 400 TGGCTCCTCAAGATCAGCCTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTG 459
Query 74388 GCAACGCACTATAA 74401
| ||||| || |||
Sbjct 460 GTAACGCTCTCTAA 473
>seq7318
Length=447
Score = 102 bits (112), Expect = 9e-17
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 73790 TTTCTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCACCTTCATTCGGTGTCGCA 73849
|||||||| ||||| | || ||| | ||||||| || || ||| || ||||| |||
Sbjct 46 TTTCTAATTTATCCACTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCA 105
Query 73850 GCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCATTT 73909
|| || ||||| | || |||| | || || || || ||| || | || ||||||
Sbjct 106 GCTATATTTCGCTTCATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTT 165
Query 73910 CATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCA 73969
||||||||||| || || ||| || | || | || | ||||| || || ||||||||
Sbjct 166 CATATGATGGGAGTTGCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCG 225
Query 73970 ACAGTACAGAACACATTGTATGAAGA 73995
|| ||| | || || || | ||||||
Sbjct 226 ACGGTAGAAAATACTTTATTTGAAGA 251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 572809731754520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |