Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_021774.1 Length=29742 Score E Sequences producing significant alignments: (Bits) Value seq1378 206 5e-49 >seq1378 Length=479 Score = 206 bits (228), Expect = 5e-49 Identities = 344/490 (70%), Gaps = 29/490 (6%) Strand=Plus/Plus Query 19741 TTTCTGACCCGGCTGGCTGACCGCAACGGGGCGACAGTATCAGTCAAGGCGGGGAAACTG 19800 |||||||| ||||| || | |||| ||| | | | ||||||| || ||| Sbjct 12 TTTCTGACGCGGCTTGCCTCGCTGTACGGTGCGGTGGCAGCCATCAAGGCCGGTCGCCTG 71 Query 19801 CTGTTTCTGAAAGCCGGTAGTGCGATGACAGCCAGCGGTAAACCCGTCCCGCAAATGACC 19860 ||||||||| | || || | | || ||||||||||||||| | || || |||| Sbjct 72 CTGTTTCTGCGTCCGGGGAGCGGCGTCACGGCCAGCGGTAAACCCATTCCACAGCTGACG 131 Query 19861 CTGACACG-CAGCGATGGCGACCGTCATCAGTTTGCCATTGCCGACCGTGGAGCTTATAC 19919 | ||||| ||| || || ||||| || || ||| || ||||| || || ||||| Sbjct 132 ATTACACGACAG-GACGGTGACCGCCACACCTTCAGCATCGCTGACCGGGGCGCATATAC 190 Query 19920 CGGAGTAACGGCAAAATGGTTGCACACCAAAGACCCGAAGCCGCAAAAGCAAAAAGTGAC 19979 ||| || ||||| | ||| |||| |||| ||| ||||||||| ||||| ||| || | Sbjct 191 CGGCGTGACGGCCAGCTGGCTGCATACCAGAGATCCGAAGCCGAAAAAGGTAAAGGTCA- 249 Query 19980 GCTGAAACGTAAGCCAAAAGAGAAGCACCTGCGCGCACTGGAGCACCCGAAAGCAAAGCC 20039 |||| ||||| ||| || ||||||||||| |||||||| || || | | Sbjct 250 -----AACGCAAGCCGCGAGAAAAACACCTGCGCGCCTTGGAGCACACG---GC---GGC 298 Query 20040 GGTCAGCAAAAAGACAAAGGC-----CAAAAAAGAACCGGAAGCGCGCGAGGGTGAGTAT 20094 | ||||||| ||||| |||||| | |||||||| |||||||| || ||| Sbjct 299 G------AAAAAGAAAAAGGTGGTTACAAAAACG--CCGGAAGCACGCGAGGGGGATTAT 350 Query 20095 ATGGCCGGTGAGGCCGATAACGTGCTGGCGCTGACGACGGTCTACGCT-TCTAAGGCGCA 20153 |||||| | ||||||||| | |||| | ||||| ||||| || ||| ||| Sbjct 351 CTGGCCGCCACCGAAGATAACGTGTTTATGCTGCCCACGGTTTACGCCATCAAAGCCGCC 410 Query 20154 GGCGATGCGCGCCGCTCAGGCTAAGTGGGATAAGCTGCAGCGAGGCGTTGCGGAGTTTTC 20213 | ||||||||||||| |||| || ||||| ||||||||||| || ||||| |||||||| Sbjct 411 G-CGATGCGCGCCGCAAAGGCCAAATGGGACAAGCTGCAGCGGGGTGTTGCTGAGTTTTC 469 Query 20214 AATTACGCTG 20223 | |||||| Sbjct 470 GCTGACGCTG 479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95042732660912