Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_021774.1
Length=29742
Score E
Sequences producing significant alignments: (Bits) Value
seq1378 206 5e-49
>seq1378
Length=479
Score = 206 bits (228), Expect = 5e-49
Identities = 344/490 (70%), Gaps = 29/490 (6%)
Strand=Plus/Plus
Query 19741 TTTCTGACCCGGCTGGCTGACCGCAACGGGGCGACAGTATCAGTCAAGGCGGGGAAACTG 19800
|||||||| ||||| || | |||| ||| | | | ||||||| || |||
Sbjct 12 TTTCTGACGCGGCTTGCCTCGCTGTACGGTGCGGTGGCAGCCATCAAGGCCGGTCGCCTG 71
Query 19801 CTGTTTCTGAAAGCCGGTAGTGCGATGACAGCCAGCGGTAAACCCGTCCCGCAAATGACC 19860
||||||||| | || || | | || ||||||||||||||| | || || ||||
Sbjct 72 CTGTTTCTGCGTCCGGGGAGCGGCGTCACGGCCAGCGGTAAACCCATTCCACAGCTGACG 131
Query 19861 CTGACACG-CAGCGATGGCGACCGTCATCAGTTTGCCATTGCCGACCGTGGAGCTTATAC 19919
| ||||| ||| || || ||||| || || ||| || ||||| || || |||||
Sbjct 132 ATTACACGACAG-GACGGTGACCGCCACACCTTCAGCATCGCTGACCGGGGCGCATATAC 190
Query 19920 CGGAGTAACGGCAAAATGGTTGCACACCAAAGACCCGAAGCCGCAAAAGCAAAAAGTGAC 19979
||| || ||||| | ||| |||| |||| ||| ||||||||| ||||| ||| || |
Sbjct 191 CGGCGTGACGGCCAGCTGGCTGCATACCAGAGATCCGAAGCCGAAAAAGGTAAAGGTCA- 249
Query 19980 GCTGAAACGTAAGCCAAAAGAGAAGCACCTGCGCGCACTGGAGCACCCGAAAGCAAAGCC 20039
|||| ||||| ||| || ||||||||||| |||||||| || || | |
Sbjct 250 -----AACGCAAGCCGCGAGAAAAACACCTGCGCGCCTTGGAGCACACG---GC---GGC 298
Query 20040 GGTCAGCAAAAAGACAAAGGC-----CAAAAAAGAACCGGAAGCGCGCGAGGGTGAGTAT 20094
| ||||||| ||||| |||||| | |||||||| |||||||| || |||
Sbjct 299 G------AAAAAGAAAAAGGTGGTTACAAAAACG--CCGGAAGCACGCGAGGGGGATTAT 350
Query 20095 ATGGCCGGTGAGGCCGATAACGTGCTGGCGCTGACGACGGTCTACGCT-TCTAAGGCGCA 20153
|||||| | ||||||||| | |||| | ||||| ||||| || ||| |||
Sbjct 351 CTGGCCGCCACCGAAGATAACGTGTTTATGCTGCCCACGGTTTACGCCATCAAAGCCGCC 410
Query 20154 GGCGATGCGCGCCGCTCAGGCTAAGTGGGATAAGCTGCAGCGAGGCGTTGCGGAGTTTTC 20213
| ||||||||||||| |||| || ||||| ||||||||||| || ||||| ||||||||
Sbjct 411 G-CGATGCGCGCCGCAAAGGCCAAATGGGACAAGCTGCAGCGGGGTGTTGCTGAGTTTTC 469
Query 20214 AATTACGCTG 20223
| ||||||
Sbjct 470 GCTGACGCTG 479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 95042732660912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |