Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_021857.1
Length=41475
Score E
Sequences producing significant alignments: (Bits) Value
seq3651 437 2e-118
>seq3651
Length=7586
Score = 437 bits (484), Expect = 2e-118
Identities = 874/1274 (69%), Gaps = 51/1274 (4%)
Strand=Plus/Plus
Query 39101 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTTTCCGAT 39160
|| |||||||||| || ||||||||| | ||||| | | |||| | || |||
Sbjct 3659 TGTAGTGGTCAACTAATACTGGCCACAGCATTAGACTGTAAGTAGTACAGCCGCTCAGAT 3718
Query 39161 TCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATATCCCACG 39220
||||| || | | | |||||||| ||| || || | || ||||||||||||
Sbjct 3719 TCGTTGGGCGTCAGACTGCCGTTATACCAGTGGGGCCTGATAGCGCTGTAATATCCCGTT 3778
Query 39221 ATATAGTCCGTTATGGCG---TGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCGGC 39277
|||||| |||| ||| || ||| ||||||||||| || ||| | ||||
Sbjct 3779 ATATAGCGGATTATCGCGCCCTGGGCT---TCGCTGAAGCTGTTATAGCCCTTCGTCGGC 3835
Query 39278 ATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTT 39337
| ||||||| ||||||| |||| |||||| || ||||| ||| ||||||||||||||||
Sbjct 3836 ACCCATTCGGTCTTCAGGCTCCGGAAGAACCGCTCCATAGGGGCGTTATCCCAGCAGTTT 3895
Query 39338 CCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCCGGAACTGCCT 39397
|| || || ||||||||||| | ||| | ||||||| ||||| | || |
Sbjct 3896 CCCCGTCGACTCATACTCTGCTTTATCCTACAGCGCCACAGCGCCTGCCGATATCTACG- 3954
Query 39398 GCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCGGGCTTACCACGGGT 39457
||| ||||| | |||||||| |||||||||||| ||| | |||||||| ||
Sbjct 3955 GCTGGTATAGGGGCTGCCCTGGTCGCTGTGGAACGCCACGTCTGTTGGCTTACCCCGAAG 4014
Query 39458 TTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGC--TGTCCGGCGAGAACGACATG 39515
||||| ||||| | || |||||| | || || ||| |||||| || |||||||
Sbjct 4015 CTCCCAGGCCATCTGCAACGCTTTGACCGTCAG--TGCCGAGTCCGGTGACGTCGACATG 4072
Query 39516 GCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGC 39575
||||||||||| ||||| | ||| |||| ||| || || || || || || |||||||
Sbjct 4073 GCCCAGCCCACCGGTTTACGTGCAAACAAGTCCAGCACCACCGCCAGATAAGCCCAGCAT 4132
Query 39576 TTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCACGGCG 39635
||||||||||||||||| |||||||| |||||||| ||||| | ||| |||| || |||
Sbjct 4133 TTACCCGTCCAGATATAAGTCACATCGCCGCACCAGACCTGGTCCGGCCCGGTAACCGCG 4192
Query 39636 AACTGCCTTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCACGTTTATACCGG 39695
||||| | || || | ||| || || |||| ||||| | || || ||||| || |
Sbjct 4193 AACTGGCGGTCGAGATGGTTCGGTATCTCAACGTGTTCGTTTCCGCCGCGTTTGTATTTG 4252
Query 39696 TGAGTCGGCT-GCTGACAGCTGACCAGCCCCAGCTCTTTCATGAGCCTGCCAGCAAGCCA 39754
|| | | ||| ||| || ||| | | |||||||||||| ||| | || |||||
Sbjct 4253 TGCG-CTGCTATCTGGCAACTGGCGATATTCAGCTCTTTCATCAGCTTACC----AGCCA 4307
Query 39755 GCGTCCCATCTGGTAGCC--TCTCCGGGTTG-CCATTGTGGCGATGCTTCTTGCTCCGGC 39811
||| ||||| | | ||| ||| | || | || | ||||| |||| || |||||
Sbjct 4308 GCGGCCCATTTTGACGCCAGAGTCCCTGCTGACGATGGCAGCGATACTTCGGGCGCCGGC 4367
Query 39812 CGAACCGTGGCTG--ATGCCATGTAGCTCAAGTACCTGACTGCGTAATACAGCCCGTCTG 39869
|| ||| |||| | ||| | ||| | |||| || || || | ||| |
Sbjct 4368 AGAGCCGCCGCTGGCGTTCCAGG--CCTCCATGACCTTGCTACGCTTGACCACACGTTCG 4425
Query 39870 CCGTCTGGTT--TT---TCAGGACGGTTTTTCCAGTATCTGTAGCTGCTGCGATGAACCC 39924
||||| || | || | | | ||| ||||| ||||||||||||||||| ||
Sbjct 4426 CCGTCAGGCTCATTCGCTGAAGCCGG-----CCAGTGCCTGTAGCTGCTGCGATGGACGT 4480
Query 39925 CGAACACATGGCAGAGTGTGACCATAGGATAATGCGCTCTGAGTTTCCCGATTATCGAGA 39984
| || ||||| | | | | ||||| |||||| || | ||| || || ||
Sbjct 4481 CAAAAGTCTGGCACAACGCAGCGACCGGATACCTCGCTCTTAGCCTGTCGACTACCGTGA 4540
Query 39985 ACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTCTCCAT 40044
|| ||| || | ||| ||||| |||||||| ||||||||||||| ||||| ||||||||
Sbjct 4541 ACCGTTGAGTGCGTCCGACATTAAGAGCGCCGTAGCCTTTTTTAGGATTTCGTTCTCCAT 4600
Query 40045 TTCAATGCGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTGTTCCGGGGTAATGGG 40104
||||| |||||||| || ||||| |||||| | || | ||||| || || | |
Sbjct 4601 TTCAAGGCGTTGTATTTTCTTCCTCGCCTCACGCAGCTCGAGCTGTTCTGGCGTCA--GA 4658
Query 40105 GGAGG--CTTTTGGTGTTTTGCCCTGACGCTCATCACGCAGTTGTTTGACCCATCTTGTC 40162
||||| | || ||||| ||||| |||||| ||||| | || ||||| | |
Sbjct 4659 GGAGGCCCGGCGGGCGTTTTCCCCTGGCGCTCAAGTCGCAGCTTATTCACCCAACGGGGG 4718
Query 40163 ATTGTGGAAAGGCCAACATCCATAGCTTTGGCGGCATCTGCCACCGT--GTATTTC--TG 40218
|| | ||| ||| || | | || | ||||| | | ||| |||| | ||
Sbjct 4719 ATAGCCGAATGGCTTACGTTAACTGCCTCTGCGGCCT----TAACGTAGGTATAGCCGTG 4774
Query 40219 GTCAACAACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTAAAATTTCtttttttCAT 40278
||| ||||| | | || | ||| | ||||| || | | ||| ||| |||
Sbjct 4775 GTCGACAACTAACTTCGCCGCTTCAAGCTTAAATTCCGGCGTGGAAT---GTTTAGCCAT 4831
Query 40279 TGGAGCACCTGTGTTGTTCTG-AGGTGAGCATATCACC-TCTGTTCAGGTGGCCAAATTC 40336
||| |||||||| |||| | ||||||| |||||||| || | ||||||| ||| ||
Sbjct 4832 TGGGTCACCTGTGGTGTTGGGAAGGTGAGAATATCACCTTCCGATCAGGTGACCAGTATC 4891
Query 40337 AGTGTGCCACTTCA 40350
||||| ||||| ||
Sbjct 4892 AGTGTACCACTACA 4905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132584356089086
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |