Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq611 118 1e-20 >seq611 Length=762 Score = 118 bits (130), Expect = 1e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| || || ||| | | ||| ||||| ||||||||||||||||| |||| || Sbjct 289 GCTTGGAGAGCTCACCGGGGAGGATGAGGCGGACGGCGGTCTGGATCTCTCGCGACGAGA 348 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || || || | |||||| ||| ||||||| |||| | Sbjct 349 TGGTCGACTTCTTGTTGTAGGAAGCGAGCTTGGAGGCCTCAGTGGCGATGCGCTCGAAGA 408 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTC--GGG 1254520 |||| | ||| |||||||| | | | || | |||||| ||||| || | ||| ||| Sbjct 409 TGTCCTGGACGAACGAGTTGAGAATGGCAATGGCCTTGTTCGAGATACCGATGTCACGGG 468 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 ||| ||||||||||| |||||||||||| | || ||||| Sbjct 469 GTGGACCTGCTTGAGGACCTTGTAGATGTAGGAGGAGTA 507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106407265092323