Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq611 141 1e-27 seq2167 91.5 2e-12 >seq611 Length=762 Score = 141 bits (156), Expect = 1e-27 Identities = 185/255 (73%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| | ||||||||| || |||| ||||||| ||| || || ||| | | || Sbjct 253 ACTTGGTGACCGACTTGGTACCTTCCGAGATGGCGTGCTTGGAGAGCTCACCGGGGAGGA 312 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 | ||||| ||||||||||||||||| || | ||| || |||||| | | Sbjct 313 TGAGGCGGACGGCGGTCTGGATCTCTCGCGACGAGATGGTCGACTTCTTGTTGTAGGAAG 372 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 | || | |||||| ||| ||||||| |||| ||||| | ||| |||||||| | | Sbjct 373 CGAGCTTGGAGGCCTCAGTGGCGATGCGCTCGAAGATGTCCTGGACGAACGAGTTGAGAA 432 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGT--CGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 | | || | ||||| ||||| || | || ||||||| ||||||||||| |||||||| Sbjct 433 TGGCAATGGCCTTGTTCGAGATACCGATGTCACGGGGTGGACCTGCTTGAGGACCTTGTA 492 Query 1485711 AACAAAGGACGAGTA 1485725 | |||| ||||| Sbjct 493 GATGTAGGAGGAGTA 507 >seq2167 Length=570 Score = 91.5 bits (100), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 796306 TCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAG 796365 || ||||||||||| ||||| ||||||||||| |||||||||| ||| ||| ||||| Sbjct 319 TCTTCGGCGGTCCAGAAGGATGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAC 260 Query 796366 CGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || ||||| || || ||||||| |||||||| | || || ||||| Sbjct 259 TTAATTGGGAAGAGCACGAAGCGATGAGGGTTCTCTTGCAGGAGAGGCTC 210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915297645290441