Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq6248 136 3e-27 seq4483 132 3e-26 seq4845 120 2e-22 seq3354 116 2e-21 seq7783 111 1e-19 seq8071 105 4e-18 seq8630 100 2e-16 seq2811 100 2e-16 >seq6248 Length=918 Score = 136 bits (150), Expect = 3e-27 Identities = 163/219 (74%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| ||||| || ||| | || |||| Sbjct 342 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCC 283 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| ||||||||||||| || || |||||| | || | ||||||||||| Sbjct 282 TCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCC 223 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| ||| | |||||| || | || || Sbjct 222 TGGATCTTGGTCTTGAC--AT--TGTCGATGGTGTCAGAAGACTCGACCTCGAGAGTGAT 167 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 |||||| || ||||||||||| || |||||||||||||| Sbjct 166 GGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGAT 128 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || || | || |||| || ||||||||||| || || Sbjct 550 CTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCAAA 491 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| || || |||||| | || | ||||||||||| | || || |||||| Sbjct 490 GATCAGACGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTT 431 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || || || || || | || |||||||| || || || ||||| || Sbjct 430 GTCGATAGTGTCGGAGGATTCAACCTCGAGTGTGATGGTCTTGCCAGTAAGTGTCTTGAC 371 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 370 GAAGATCTGCAT 359 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | || ||||||||| ||||| ||||| || || | ||| |||| Sbjct 799 CAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGCCCATC 740 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| |||||||| || ||||| || || || |||||| | || | ||||||||||| Sbjct 739 CTCCAGCTGCTTTCCTGCAAAGATAAGACGCTGTTGGTCTGGTGGGATACCCTCCTTGTC 680 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || || ||| | || | || | || || || | || || || Sbjct 679 CTGAATCTTGGTCTTCACGTTGTCGATAGTGTCTGAAGATTCCACCTCGAGTGTAATCGT 620 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||||| | |||||| || ||||| ||||| Sbjct 619 CTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 587 >seq4483 Length=688 Score = 132 bits (146), Expect = 3e-26 Identities = 162/219 (74%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| |||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 430 AGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 489 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| || |||||||| | || | ||||||||||| Sbjct 490 TCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 549 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || | ||| || |||| ||| || Sbjct 550 TGGATCTTGGTCTTGAC--AT--TGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGAT 605 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||||| |||||||||||||| || |||||||||||||| Sbjct 606 AGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATGAT 644 >seq4845 Length=48244 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806 ||| || || |||| |||| ||||| ||||| || |||||| || ||||||||||| Sbjct 16057 ATTGCCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTC 16116 Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866 || | | | |||| ||||||||||| || || || ||||||| ||| |||||| | Sbjct 16117 TGACAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGG 16176 Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTC 34926 || | || |||||||| | || || |||||| | || | ||| | ||| Sbjct 16177 AGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTC 16236 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || | |||||||||||| || || || ||||| || ||||| ||||| Sbjct 16237 GACCTCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 16287 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || |||| |||| ||||| ||||| || |||||| || ||||||||||| || Sbjct 16289 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGAC 16348 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | | |||| ||||||||||| || || || ||||||| ||| |||||| | || Sbjct 16349 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGA 16408 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || |||||| | || | ||| | |||||| Sbjct 16409 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACC 16468 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||||||||| || || || ||||| || ||||| ||||| Sbjct 16469 TCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 16515 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || |||| |||| ||||| ||||| || |||||| || ||||||||||| || Sbjct 16517 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGAC 16576 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | | |||| ||||||||||| || || || ||||||| ||| |||||| | || Sbjct 16577 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGA 16636 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || |||||| | || | ||| | |||||| Sbjct 16637 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACC 16696 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||||||||| || || || ||||| || ||||| ||||| Sbjct 16697 TCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 16743 >seq3354 Length=695 Score = 116 bits (128), Expect = 2e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||| ||||| |||||||| || |||| | || Sbjct 255 AGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCC 314 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||||||||| || |||||||| | || | ||||||||||| Sbjct 315 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 374 Query 34886 TTTATTTTTTGTTTGACGGATGCT-ATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||| || | || | || || ||| || || | ||| ||||| Sbjct 375 TGAATCTTGGCCTTGAC-ATTGTTGATGGTGTCCGAGGACTCCACCTCGAGGGTAATGGT 433 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||||| || ||||| || || |||||||| Sbjct 434 CTTACCCGTCAGAGTCTTGACGAAAATCTGCAT 466 >seq7783 Length=540 Score = 111 bits (122), Expect = 1e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || || |||| | || || || |||||||| || || Sbjct 189 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAA 130 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| ||||| ||||| || | || | || |||||||| | || || |||||| Sbjct 129 GATAAGTCGCTGCTGATCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTT 70 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | ||| || |||||| || | ||| |||||||| || ||||| ||||| || Sbjct 69 GTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAAC 10 Query 34966 AAAGATCTG 34974 ||||||||| Sbjct 9 AAAGATCTG 1 >seq8071 Length=459 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 223 AGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCC 282 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || || |||||||| | || | ||||||||||| Sbjct 283 TCAAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 342 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || || | ||| |||||| Sbjct 343 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 402 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || | |||||| || || || |||||| Sbjct 403 TTGCCGGTCAAGGTCTTGACGAAAATTTGCATG 435 >seq8630 Length=306 Score = 100 bits (110), Expect = 2e-16 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || || || |||| |||| || ||||||||||||||||| Sbjct 299 CTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCATCCTCGAGTTGCTTTCCGGCGAA 240 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || ||||| || || | || | |||||||||||| | || || || || | Sbjct 239 AATGAGACGTTGTTGATCAGGTGGGATCCCCTCCTTGTCCTGAATCTTGCTCTTAAC--A 182 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | | ||||| || | ||| || || | ||| |||||||| || || || |||| Sbjct 181 T--TGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCT 124 Query 34962 TTACAAAGATCTGCAT 34977 | || ||||||||||| Sbjct 123 TGACGAAGATCTGCAT 108 >seq2811 Length=58406 Score = 100 bits (110), Expect = 2e-16 Identities = 164/235 (70%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 34744 ATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTAT 34802 |||| || || |||||||| |||| || ||||||| || ||||||||||||||||| Sbjct 26961 ATCAGTTACCACCCCTCAATCTCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTAT 27020 Query 34803 AGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT 34862 | || || || | | | || ||||||||||| ||||| || |||| || ||| || | Sbjct 27021 AATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGAT 27080 Query 34863 CTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGG 34922 || | || | || |||||||| | ||||| |||||| | || | || | Sbjct 27081 CTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTGACGTTGTCAATAGTGTCGGAAG 27140 Query 34923 CCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| ||||| || || || || || || || || ||||| Sbjct 27141 ATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27195 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || ||||| |||| |||| ||||| || |||||||||||||| || || || Sbjct 27197 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 27256 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | | || ||||||||||| ||||| || |||| || ||| || ||| | || Sbjct 27257 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 27316 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | ||||| ||||||| | || | || | || || Sbjct 27317 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 27376 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||| ||||| || || || || || || || || ||||| Sbjct 27377 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325657397090861