Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_022750.1 Length=33628 Score E Sequences producing significant alignments: (Bits) Value seq1378 168 1e-37 >seq1378 Length=479 Score = 168 bits (186), Expect = 1e-37 Identities = 289/415 (70%), Gaps = 16/415 (4%) Strand=Plus/Plus Query 21670 CTGCTGTTTCTCAAAGCGGGGCAGGGGGTGACGGCCAGTGGTaaaaaaaTCCCGCAGATT 21729 ||||||||||| ||||| || || |||||||| |||||| || || ||| | Sbjct 69 CTGCTGTTTCTGCGTCCGGGGAGCGGCGTCACGGCCAGCGGTAAACCCATTCCACAGCTG 128 Query 21730 ACCATCACCCG-CAGCGACGGCGACCGTCAT-CATTTTGCGATTGCTGACCGTGGAGCTT 21787 || || || || ||| ||||| ||||| || | || || || |||||||| || || | Sbjct 129 ACGATTACACGACAG-GACGGTGACCGCCACACCTTCAGC-ATCGCTGACCGGGGCGCAT 186 Query 21788 ACACCGGCGTAACGGCAAAGTGGTTACACACCaaagacccgaaaccacaaaagcagaagg 21847 | |||||||| ||||| | ||| | || |||| ||| ||||| || ||||| | Sbjct 187 ATACCGGCGTGACGGCCAGCTGGCTGCATACCAGAGATCCGAAGCCGAAAAAG------G 240 Query 21848 taaaactgaaacgcaaaaagaaagaaaaacACCTGCGCGCACTGGAGCACCCGAAAGCAA 21907 |||| | |||||||| | |||||||||||||||||| |||||||| || || | Sbjct 241 TAAAGGTCAAACGCAAGCCGCGAGAAAAACACCTGCGCGCCTTGGAGCACACGGCGGCGA 300 Query 21908 AACCGGTCACGCAGAAGAAAGCGCCAAAAGTACCGGAAGCGCGCGAAGGTGAATACATGG 21967 || | | | ||| | ||||| |||||||| ||||| || || || ||| Sbjct 301 AA------AAGAAAAAGGTGGTTACAAAAACGCCGGAAGCACGCGAGGGGGATTATCTGG 354 Query 21968 CCGGTGAGGCTGACAACGTTTTTGCCCTGACTACGGTATATGCCACGAAAGCGCAGGCCA 22027 ||| | || ||||| ||| ||| | ||||| || |||| ||||| || | Sbjct 355 CCGCCACCGAAGATAACGTGTTTATGCTGCCCACGGTTTACGCCATCAAAGCCGCCGCGA 414 Query 22028 TGCGCGCCGCTCAGGCGAAGTGGGATAAACTGCAACGGGGTGTGGCGGAGTTCTC 22082 |||||||||| |||| || ||||| || ||||| |||||||| || ||||| || Sbjct 415 TGCGCGCCGCAAAGGCCAAATGGGACAAGCTGCAGCGGGGTGTTGCTGAGTTTTC 469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107476615610020