Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq2898 104 3e-17 >seq2898 Length=39256 Score = 104 bits (114), Expect = 3e-17 Identities = 165/228 (72%), Gaps = 9/228 (4%) Strand=Plus/Plus Query 168581 AGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTT-ATGTGGTTTTA 168639 ||||||||| ||||| ||| |||||| |||||||||| ||||||| ||| |||| | Sbjct 20273 AGGTGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATAAGATGGGGTTCAA 20332 Query 168640 CCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAG 168699 || || |||| ||| ||| | || || ||||||||||||||||||| ||| || | Sbjct 20333 A-GATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTG 20391 Query 168700 CTCAATATATTGAC-TGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAA 168758 || |||| | ||| || ||| || || || |||||||| | || ||||| | || Sbjct 20392 CTAAATACA-AGACGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAG 20450 Query 168759 ACTAT--AAATACTTTACACAACAATCCGGAAAATAGAAGAAT-ATTA 168803 ||| | | |||| | ||| ||||| | |||||||||| |||| Sbjct 20451 GTTATTCATAAACTTAAGACA--AATCCCTACGATAGAAGAATCATTA 20496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635106785637320