Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq3354 131 2e-25
seq4483 129 6e-25
seq8071 125 7e-24
seq7783 125 7e-24
seq5887 104 2e-17
>seq3354
Length=695
Score = 131 bits (144), Expect = 2e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||| ||||| || ||||| || | |||| ||||||||||||||||||
Sbjct 270 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 329
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | || || ||||||||||| || |||||||| |||||||| ||||| ||||
Sbjct 330 GCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 389
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | | | ||||| | || |||||| |||| ||| | ||| || || ||||||||
Sbjct 390 ACATTGTTGATGGTGTCCGAGGACTCCACCTCGAGGGTAATGGTCTTACCCGTCAGAGTC 449
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 450 TTGACGAAAATCTGCAT 466
>seq4483
Length=688
Score = 129 bits (142), Expect = 6e-25
Identities = 148/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| | ||| ||||||||||||||||||
Sbjct 444 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 503
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | |||||||||||||| |||||||| |||||||| |||||| |||
Sbjct 504 TGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTT 563
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||||| | |||||| || | ||||| || || || || || ||
Sbjct 564 GACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGT 623
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 624 CTTGACGAAGATCTGCATG 642
>seq8071
Length=459
Score = 125 bits (138), Expect = 7e-24
Identities = 154/208 (74%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| || | ||| | | | ||||| ||
Sbjct 229 AAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCA-TCCTCAAG 287
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| || | || || ||||||||||| ||||| ||||| |||||||| |||
Sbjct 288 CTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGAT 347
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | || | ||||||| | ||| || |||| ||||| ||| |||||
Sbjct 348 CTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCC 407
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661
||||| || || |||||||| ||||||
Sbjct 408 GGTCAAGGTCTTGACGAAAATTTGCATG 435
>seq7783
Length=540
Score = 125 bits (138), Expect = 7e-24
Identities = 144/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||| ||||| || ||||| ||| | ||| ||||||||||||||| ||
Sbjct 194 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTTCCT 135
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| | || || |||||||| ||||| ||||||||||||||||| |||||| ||||
Sbjct 134 GCAAAGATAAGTCGCTGCTGATCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 75
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | ||||| | || ||| || |||| ||||| ||| |||||||| |||||
Sbjct 74 ACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTC 15
Query 133644 TTTACGAAAATCTG 133657
|| || || |||||
Sbjct 14 TTAACAAAGATCTG 1
>seq5887
Length=461
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| || |||||||| ||| | || | || | |||||||| ||||| |||||||||
Sbjct 191 TCCTCAAGTTGCTTGCCAGCGAAGATCAAGCGTTATTGGTCGGGTGGGATTCCTTCCTTG 132
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | || || | | |||||| |||| ||||| |
Sbjct 131 TCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCCACCTCGAAGGTGATG 72
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| ||||| || || ||||||||||||||
Sbjct 71 GTCTTGCCCGTCAGGGTCTTCACGAAAATCTGCAT 37
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483366904623560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |