Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq8857 538 1e-148 seq7678 291 2e-74 >seq8857 Length=8770 Score = 538 bits (596), Expect = 1e-148 Identities = 704/962 (73%), Gaps = 12/962 (1%) Strand=Plus/Minus Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591 ||||| ||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 6345 Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650 |||| || || || || |||||||| ||||| ||||| || |||||||| || || || Sbjct 6344 TTCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285 Query 19651 ACCCGTATCCGGTAGCCTT-CTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGA 19709 ||| || || || | | || ||||| |||||||| || || || || ||| | |||| | Sbjct 6284 ACCTGTTTCTGG-ATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTA 6226 Query 19710 G--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGA 19767 | || || ||||| | ||||| || ||||| |||||||| || ||||||| Sbjct 6225 CTTCTGCG--GCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGA 6168 Query 19768 ATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTA 19827 |||| | ||||| || || || | | || | || | |||||| | | || | Sbjct 6167 ATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGC 6108 Query 19828 TGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTG 19887 | ||||||||| || ||||||||||| || | || || || ||| | ||||||||| Sbjct 6107 TTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGC 6048 Query 19888 TGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTG 19946 |||||| || || ||||| |||||||| || |||| || ||||| | | ||||| ||| Sbjct 6047 TGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATTTACCCAATTG 5989 Query 19947 GTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGT 20006 |||| || ||||| || |||| ||||||| | || || || ||||| ||||||| ||| Sbjct 5988 GTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGA 5929 Query 20007 TGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTG 20066 | |||||||| || ||||| ||||| || |||||||| || |||||| | ||||| |||| Sbjct 5928 TTGTATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTG 5869 Query 20067 GTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG 20126 ||||||| ||||| || ||||| ||||| ||||| ||||| |||| || | || | ||| Sbjct 5868 GTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTG 5810 Query 20127 TGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAA 20185 | | || ||||| ||| | ||| | || | |||||||| || || ||||| ||| Sbjct 5809 ATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAA 5750 Query 20186 GAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCT 20245 || || ||||| || ||||| ||||||||||| ||||| || |||||||||||||| || Sbjct 5749 GAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCA 5690 Query 20246 TCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATT 20305 ||||||||| |||||| |||| |||||| | ||||| ||||| || | || ||| Sbjct 5689 AGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATT 5630 Query 20306 TGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAAC 20365 ||||| |||| || || || ||| ||||| || ||| | || |||||||| || || Sbjct 5629 TGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAAT 5570 Query 20366 CAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGT 20425 || || | | || | | |||||||| ||| |||| || ||||| || | || || Sbjct 5569 CAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGC 5510 Query 20426 GCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTT 20485 ||||| || || | || || ||||||||||| ||||||||||||||||| || ||||| Sbjct 5509 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTA 5450 Query 20486 GC 20487 || Sbjct 5449 GC 5448 >seq7678 Length=557 Score = 291 bits (322), Expect = 2e-74 Identities = 335/445 (75%), Gaps = 7/445 (2%) Strand=Plus/Minus Query 20098 GCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAGACTACTGAACAGGAAAGTCAGAA 20157 ||||||||| | ||||| ||||| | || ||||| || || ||| ||| || || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 20158 CTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTA 20217 ||| ||||||||||| || ||||||||||| ||||| ||||||||||| || || ||||| Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 20218 CTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTT 20277 |||||| || |||||||||||||||||||| |||||||| |||||||| || |||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 20278 CCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGC 20337 | | ||||| ||||| || | || || ||||| | || || || | |||||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 20338 GTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCAT 20397 ||| || |||||||| |||||||| ||||| || | |||| | ||||| ||||| Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 20398 TGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGT-TTGAGGTGATGCATGAAC 20456 | ||||||||||||| | |||| || ||||| || |||| | || || ||||| || | Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAA-CTTGGGTATGGAAGTCATGCACGAGC 194 Query 20457 GGAATGCTCATAACTTCCCACTTGACCTTGCCAGC-GCTGAAACCACTCCCGTGGCACTG 20515 | || ||||| |||||||| ||| |||| | || | |||| |||| ||||| | Sbjct 193 GTAACGCTCACAACTTCCC-CTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTA 135 Query 20516 GTAGCTCCTGCGAT---CGGCTAAT 20537 || ||||| || |||||||| Sbjct 134 ACTGCACCTGCAATCAACGGCTAAT 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148813037076702