Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_025456.1
Length=46547
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 538 1e-148
seq7678 291 2e-74
>seq8857
Length=8770
Score = 538 bits (596), Expect = 1e-148
Identities = 704/962 (73%), Gaps = 12/962 (1%)
Strand=Plus/Minus
Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591
||||| ||||| |||| |||||||| ||||||| || | || ||| || |
Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 6345
Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650
|||| || || || || |||||||| ||||| ||||| || |||||||| || || ||
Sbjct 6344 TTCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285
Query 19651 ACCCGTATCCGGTAGCCTT-CTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGA 19709
||| || || || | | || ||||| |||||||| || || || || ||| | |||| |
Sbjct 6284 ACCTGTTTCTGG-ATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTA 6226
Query 19710 G--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGA 19767
| || || ||||| | ||||| || ||||| |||||||| || |||||||
Sbjct 6225 CTTCTGCG--GCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGA 6168
Query 19768 ATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTA 19827
|||| | ||||| || || || | | || | || | |||||| | | || |
Sbjct 6167 ATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGC 6108
Query 19828 TGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTG 19887
| ||||||||| || ||||||||||| || | || || || ||| | |||||||||
Sbjct 6107 TTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGC 6048
Query 19888 TGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTG 19946
|||||| || || ||||| |||||||| || |||| || ||||| | | ||||| |||
Sbjct 6047 TGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATTTACCCAATTG 5989
Query 19947 GTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGT 20006
|||| || ||||| || |||| ||||||| | || || || ||||| ||||||| |||
Sbjct 5988 GTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGA 5929
Query 20007 TGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTG 20066
| |||||||| || ||||| ||||| || |||||||| || |||||| | ||||| ||||
Sbjct 5928 TTGTATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTG 5869
Query 20067 GTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG 20126
||||||| ||||| || ||||| ||||| ||||| ||||| |||| || | || | |||
Sbjct 5868 GTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTG 5810
Query 20127 TGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAA 20185
| | || ||||| ||| | ||| | || | |||||||| || || ||||| |||
Sbjct 5809 ATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAA 5750
Query 20186 GAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCT 20245
|| || ||||| || ||||| ||||||||||| ||||| || |||||||||||||| ||
Sbjct 5749 GAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCA 5690
Query 20246 TCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATT 20305
||||||||| |||||| |||| |||||| | ||||| ||||| || | || |||
Sbjct 5689 AGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATT 5630
Query 20306 TGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAAC 20365
||||| |||| || || || ||| ||||| || ||| | || |||||||| || ||
Sbjct 5629 TGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAAT 5570
Query 20366 CAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGT 20425
|| || | | || | | |||||||| ||| |||| || ||||| || | || ||
Sbjct 5569 CAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGC 5510
Query 20426 GCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTT 20485
||||| || || | || || ||||||||||| ||||||||||||||||| || |||||
Sbjct 5509 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTA 5450
Query 20486 GC 20487
||
Sbjct 5449 GC 5448
>seq7678
Length=557
Score = 291 bits (322), Expect = 2e-74
Identities = 335/445 (75%), Gaps = 7/445 (2%)
Strand=Plus/Minus
Query 20098 GCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAGACTACTGAACAGGAAAGTCAGAA 20157
||||||||| | ||||| ||||| | || ||||| || || ||| ||| || ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 20158 CTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTA 20217
||| ||||||||||| || ||||||||||| ||||| ||||||||||| || || |||||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 20218 CTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTT 20277
|||||| || |||||||||||||||||||| |||||||| |||||||| || ||||||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 20278 CCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGC 20337
| | ||||| ||||| || | || || ||||| | || || || | ||||||||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313
Query 20338 GTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCAT 20397
||| || |||||||| |||||||| ||||| || | |||| | ||||| |||||
Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253
Query 20398 TGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGT-TTGAGGTGATGCATGAAC 20456
| ||||||||||||| | |||| || ||||| || |||| | || || ||||| || |
Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAA-CTTGGGTATGGAAGTCATGCACGAGC 194
Query 20457 GGAATGCTCATAACTTCCCACTTGACCTTGCCAGC-GCTGAAACCACTCCCGTGGCACTG 20515
| || ||||| |||||||| ||| |||| | || | |||| |||| ||||| |
Sbjct 193 GTAACGCTCACAACTTCCC-CTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTA 135
Query 20516 GTAGCTCCTGCGAT---CGGCTAAT 20537
|| ||||| || ||||||||
Sbjct 134 ACTGCACCTGCAATCAACGGCTAAT 110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148813037076702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |