Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq8857 500 3e-137 seq7678 291 2e-74 >seq8857 Length=8770 Score = 500 bits (554), Expect = 3e-137 Identities = 692/961 (72%), Gaps = 8/961 (1%) Strand=Plus/Minus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||| ||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 6345 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || || || || |||||||| || || ||||| || |||||||| || || || Sbjct 6344 TTCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 |||||| ||||| | | || || |||||||| || || || || ||| | | || | Sbjct 6284 ACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTAC 6225 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | || || ||||| | ||||| || ||||| |||||||| || |||||||| Sbjct 6224 TTCTGCG--GCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAA 6167 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | ||||| || || || | | || | || | |||||| | | || || | Sbjct 6166 TGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCT 6107 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||||||||| || ||||||||||| || | || || || ||| | || |||||| | Sbjct 6106 TGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCT 6047 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || || || |||||||| || ||||| || |||| |||||| | | |||||| | ||| Sbjct 6046 GTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGT 5987 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| ||| || | |||||| | || ||||| || || ||||||| ||| | Sbjct 5986 CAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATT 5927 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || ||||| || ||||| ||||| || |||||||| || |||||| | || || ||||| Sbjct 5926 GTATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGT 5867 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTG 29256 || || |||||||| ||||||||||| ||||| ||||| | || || || | | ||| Sbjct 5866 GTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGAT 5808 Query 29257 C-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | | || || || ||| | ||| || | |||||||| || || ||||| ||||| Sbjct 5807 CAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGA 5748 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 |||||||| || ||||| ||||| ||||| ||||| || ||||||||||||||||| Sbjct 5747 AACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAG 5688 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 |||||| || |||||| |||| |||||| | ||||| ||||| || | || ||||| Sbjct 5687 TTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTG 5628 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 ||| |||| || || || ||| ||||| || ||| | || ||||| || || || || Sbjct 5627 GTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCA 5568 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 || | | || | | |||||||| |||||||| || |||||| | | || ||||| Sbjct 5567 ATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGC 5508 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 |||||| || | ||||| |||||||| |||||||||||||||||||| || || || || Sbjct 5507 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448 Query 29616 T 29616 | Sbjct 5447 T 5447 >seq7678 Length=557 Score = 291 bits (322), Expect = 2e-74 Identities = 299/391 (76%), Gaps = 0/391 (0%) Strand=Plus/Minus Query 29226 GCACGGTTCGCTTGTCACGTCCTCGCTTGTGCGTGAGACGACTGAAGACATCTCTCAGAA 29285 ||||||||| | || || ||||| | || ||||| || || ||| | || || || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 29286 CTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTA 29345 ||| ||||||||||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 29346 CTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTT 29405 |||||| || |||||||||||||| ||||| ||||| || |||||||| || |||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 29406 CCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGC 29465 | | ||||| ||||| || | || || ||||| | || || || | |||||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 29466 GTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCAT 29525 ||| || |||||||| || ||||| ||||| || | |||| | ||||| ||||| Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 29526 TAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCG 29585 |||||||||||| || |||| ||||||||| | || | ||||| ||||| ||||| Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 29586 TAATGCTCATAACTTCCCACTTGATCTGGCT 29616 ||| ||||| |||||||| | || ||||| Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCT 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146650066187974