Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_025464.1
Length=44147
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 594 1e-165
seq7678 282 1e-71
>seq8857
Length=8770
Score = 594 bits (658), Expect = 1e-165
Identities = 727/982 (74%), Gaps = 10/982 (1%)
Strand=Plus/Minus
Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783
|| ||| ||||| ||||||| || || ||||| ||||| || || |||||||| ||
Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371
Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841
||||| || | || ||| | || ||| | ||| || || || |||||||||||||| |
Sbjct 6370 ATGATCCC-TACCTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTC 6313
Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901
|||| ||||| |||||||| || || || |||||| | || | | ||||| |||||||
Sbjct 6312 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACA 6253
Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCC 18959
| || || || || ||| | |||| | | || || ||||| | ||||| || ||
Sbjct 6252 ATATTATCTCCGGTGCCATTATTCCTACTTCTGCG--GCTATCGGTTTGCACTTTTATCC 6195
Query 18960 AATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGT 19019
||| |||||||| || ||||||||||| | ||||| || || || | | || |
Sbjct 6194 AATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAAT 6135
Query 19020 GGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTA 19079
|| | |||||| | | || || | ||||||||| || ||||||||||| || |
Sbjct 6134 TGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTT 6075
Query 19080 TCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTC 19139
|| || || ||||||||||||||| |||||| || |||||||||||||| || || |
Sbjct 6074 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTAC 6015
Query 19140 TGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGG 19199
||| || ||| | | || ||| |||||||||| |||| || | ||||||| | ||
Sbjct 6014 TGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGG 5955
Query 19200 TATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCA 19259
||| |||||| ||||||| ||| ||||||||||||||||||| |||||||| |||||
Sbjct 5954 CATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCA 5895
Query 19260 CCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCA 19319
||| || |||||| | ||||| |||||||| || || || || ||||||||||| |||||
Sbjct 5894 CCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCA 5835
Query 19320 CGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACT 19378
||||| |||| || | || | ||| | | |||||||| ||| | | |||| ||
Sbjct 5834 TGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATG 5776
Query 19379 ATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438
| || ||||| || || ||||| ||||| |||||||| ||||| ||||||||||| ||||
Sbjct 5775 AAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATT 5716
Query 19439 TTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTT 19498
|||| || | || ||||| || ||| |||||||| |||||| |||||||||| |
Sbjct 5715 TTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCT 5656
Query 19499 TGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCAT 19558
| ||||||||||| || | || ||||||||| | || | || | || || ||||| |
Sbjct 5655 TAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTT 5596
Query 19559 TCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTG 19618
|||| || ||||| || || || || || || | |||| | | |||||||| |||
Sbjct 5595 TCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA 5536
Query 19619 ATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTA 19678
|||| || ||||| || | || || |||||||| || | || || ||||| |||||||
Sbjct 5535 ATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTA 5476
Query 19679 ATGCTCATAACTTCCCACTTGA 19700
|||||||||||||||| || ||
Sbjct 5475 ATGCTCATAACTTCCCTCTAGA 5454
>seq7678
Length=557
Score = 282 bits (312), Expect = 1e-71
Identities = 297/391 (76%), Gaps = 0/391 (0%)
Strand=Plus/Minus
Query 19317 GCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAAACTACTGAAGAGGTATCTCAGAA 19376
||||||||| | ||||| ||||| | || |||||||| || ||| | ||| || ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 19377 CTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTA 19436
||| || |||||||| || ||||||||||| || || ||||| || ||||| || || ||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 19437 TTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTT 19496
||||||||| | || ||||| ||||| ||||||||||| |||||||| || || |||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 19497 TTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGC 19556
|||||||| ||||| || | || || |||||| |||| | || | ||||| |||||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313
Query 19557 ATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCAT 19616
|||||| |||| || || ||||| ||||| || | | || | ||||| |||||
Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253
Query 19617 TGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACG 19676
| ||||||||||||| | |||| || |||||| | || | || || |||||||| ||
Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193
Query 19677 TAATGCTCATAACTTCCCACTTGATTTGGCT 19707
||| ||||| |||||||| | || ||||||
Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCT 162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141133850489502
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |