Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq8857 594 1e-165 seq7678 282 1e-71 >seq8857 Length=8770 Score = 594 bits (658), Expect = 1e-165 Identities = 727/982 (74%), Gaps = 10/982 (1%) Strand=Plus/Minus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || ||| ||||| ||||||| || || ||||| ||||| || || |||||||| || Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371 Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841 ||||| || | || ||| | || ||| | ||| || || || |||||||||||||| | Sbjct 6370 ATGATCCC-TACCTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTC 6313 Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901 |||| ||||| |||||||| || || || |||||| | || | | ||||| ||||||| Sbjct 6312 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACA 6253 Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCC 18959 | || || || || ||| | |||| | | || || ||||| | ||||| || || Sbjct 6252 ATATTATCTCCGGTGCCATTATTCCTACTTCTGCG--GCTATCGGTTTGCACTTTTATCC 6195 Query 18960 AATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGT 19019 ||| |||||||| || ||||||||||| | ||||| || || || | | || | Sbjct 6194 AATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAAT 6135 Query 19020 GGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTA 19079 || | |||||| | | || || | ||||||||| || ||||||||||| || | Sbjct 6134 TGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTT 6075 Query 19080 TCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTC 19139 || || || ||||||||||||||| |||||| || |||||||||||||| || || | Sbjct 6074 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTAC 6015 Query 19140 TGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGG 19199 ||| || ||| | | || ||| |||||||||| |||| || | ||||||| | || Sbjct 6014 TGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGG 5955 Query 19200 TATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCA 19259 ||| |||||| ||||||| ||| ||||||||||||||||||| |||||||| ||||| Sbjct 5954 CATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCA 5895 Query 19260 CCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCA 19319 ||| || |||||| | ||||| |||||||| || || || || ||||||||||| ||||| Sbjct 5894 CCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCA 5835 Query 19320 CGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACT 19378 ||||| |||| || | || | ||| | | |||||||| ||| | | |||| || Sbjct 5834 TGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATG 5776 Query 19379 ATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438 | || ||||| || || ||||| ||||| |||||||| ||||| ||||||||||| |||| Sbjct 5775 AAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATT 5716 Query 19439 TTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTT 19498 |||| || | || ||||| || ||| |||||||| |||||| |||||||||| | Sbjct 5715 TTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCT 5656 Query 19499 TGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCAT 19558 | ||||||||||| || | || ||||||||| | || | || | || || ||||| | Sbjct 5655 TAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTT 5596 Query 19559 TCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTG 19618 |||| || ||||| || || || || || || | |||| | | |||||||| ||| Sbjct 5595 TCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA 5536 Query 19619 ATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTA 19678 |||| || ||||| || | || || |||||||| || | || || ||||| ||||||| Sbjct 5535 ATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTA 5476 Query 19679 ATGCTCATAACTTCCCACTTGA 19700 |||||||||||||||| || || Sbjct 5475 ATGCTCATAACTTCCCTCTAGA 5454 >seq7678 Length=557 Score = 282 bits (312), Expect = 1e-71 Identities = 297/391 (76%), Gaps = 0/391 (0%) Strand=Plus/Minus Query 19317 GCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAAACTACTGAAGAGGTATCTCAGAA 19376 ||||||||| | ||||| ||||| | || |||||||| || ||| | ||| || || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 19377 CTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTA 19436 ||| || |||||||| || ||||||||||| || || ||||| || ||||| || || || Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 19437 TTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTT 19496 ||||||||| | || ||||| ||||| ||||||||||| |||||||| || || ||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 19497 TTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGC 19556 |||||||| ||||| || | || || |||||| |||| | || | ||||| ||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 19557 ATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCAT 19616 |||||| |||| || || ||||| ||||| || | | || | ||||| ||||| Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 19617 TGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACG 19676 | ||||||||||||| | |||| || |||||| | || | || || |||||||| || Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 19677 TAATGCTCATAACTTCCCACTTGATTTGGCT 19707 ||| ||||| |||||||| | || |||||| Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCT 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141133850489502