Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq611 123 4e-22 seq3582 86.0 9e-11 >seq611 Length=762 Score = 123 bits (136), Expect = 4e-22 Identities = 176/244 (72%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| |||| ||||||||||| ||||||||||| |||||| || | || ||| Sbjct 507 TACTCCTCCTACATCTACAAGGTCCTCAAGCAGGTCCACCCCGTGACA--TCGGT-ATC- 452 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 || |||||| |||| | || | |||||||| ||| | ||||| |||| ||||||| | Sbjct 451 TCGAACAAGGCCATTGCCATTCTCAACTCGTTCGTCCAGGACATCTTCGAGCGCATCGCC 392 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 || |||||| || || || ||||||| || ||| |||| |||||| Sbjct 391 ACTGAGGCCTCCAAGCTCGCTTCCTACAACAAGAAGTCGACCATCTCGTCGCGAGAGATC 332 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||||||||| ||||| ||| | | ||| || || ||| ||||||| |||| || || Sbjct 331 CAGACCGCCGTCCGCCTCATCCTCCCCGGTGAGCTCTCCAAGCACGCCATCTCGGAAGGT 272 Query 725139 ACCA 725142 |||| Sbjct 271 ACCA 268 >seq3582 Length=113103 Score = 86.0 bits (94), Expect = 9e-11 Identities = 173/257 (67%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 ||||| || ||||||||||| ||||| | || || | || || || || ||| | | | Sbjct 81497 CCCACACTATTTAATGCCGGTACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCC 81556 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || || || || || || ||||| | || |||| || | || ||| Sbjct 81557 ATGAAGGACGACTCCATTGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCC 81616 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| | || || || | ||| || |||| | || || | ||| | || | Sbjct 81617 AAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATATT 81676 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || || |||||||| || ||||| | | |||||| | || || || ||| |||| Sbjct 81677 GCAGGTACCAACGGTACTTCAAACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACT 81736 Query 260165 GCGCGCTACGTCGACCA 260181 || || ||||| ||||| Sbjct 81737 GCACGTTACGTGGACCA 81753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176950946056878