Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq8857 515 5e-141 seq7678 356 3e-93 seq7307 223 4e-53 seq7318 178 2e-39 >seq8857 Length=8770 Score = 515 bits (570), Expect = 5e-141 Identities = 690/957 (72%), Gaps = 2/957 (0%) Strand=Plus/Minus Query 181008 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 181067 |||||||| || | || ||||| || || ||||||| || || | ||| | |||||| Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 6344 Query 181068 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 181126 ||||| || ||| | |||||| | |||||||| || || || || || || || ||||| Sbjct 6343 -TCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285 Query 181127 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 181186 ||| || |||| || | | || || ||||| || ||||| ||||| || |||| | Sbjct 6284 ACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTAC 6225 Query 181187 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 181246 ||| || || ||| | ||||| ||||| || |||||||| ||||| ||||||| || Sbjct 6224 TTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATG 6165 Query 181247 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATTTATGC 181306 | | || || |||||||||| | || | || | |||||| | | || | | Sbjct 6164 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTG 6105 Query 181307 ATACATGGGACGTGAATGGGAACTCTCTTACCGCTTAGGTATGCGCCCCTGGATCTGTGT 181366 |||||||| ||||| |||||||| || ||| | ||||||||||| ||||| ||| Sbjct 6104 TTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 6045 Query 181367 TGCATACTCTGCTCCAGTCGCAGCAGCATCTGCTGTATTCCTAGTCTATCCTTTCGGTCA 181426 ||| || || ||||| || ||||| || ||||||| ||| | | || || | ||||| Sbjct 6044 TGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCA 5985 Query 181427 AGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGT 181486 ||| || ||||| | ||||| || ||||| |||||||| ||||||| ||| |||| Sbjct 5984 AGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGT 5925 Query 181487 TTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGT 181546 ||||| || || |||||||| || ||||| || || |||||||| ||||| || ||||| Sbjct 5924 ATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 5865 Query 181547 ATTTGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCG 181606 ||||||||| || || || ||||| ||||| ||||| ||||| || ||| | || | Sbjct 5864 ATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 5805 Query 181607 TGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGAC 181666 || || || |||| ||| || || | |||||||| ||||| ||||| ||||| || Sbjct 5804 GGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAAC 5745 Query 181667 ATACAACATCGTCGCCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATT 181726 || || || || || || || ||||| ||||| || ||||||||||||||||| || Sbjct 5744 TTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTT 5685 Query 181727 CAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTT 181786 ||||||||| ||||| | || |||||| | || || ||||| || | || || ||||| Sbjct 5684 CAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTT 5625 Query 181787 CACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTC 181846 || || | || | || || ||||| || || | ||||| ||||| ||||| || || Sbjct 5624 TACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATC 5565 Query 181847 TATCCTCGACGGACAAGGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCGTGCCGG 181906 | | | || | ||||| ||||| | || ||||| || || | | ||||| || Sbjct 5564 TGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAA 5505 Query 181907 TCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGC 181963 || || |||||||| ||||| || || || || || |||||||| || || || || Sbjct 5504 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448 >seq7678 Length=557 Score = 356 bits (394), Expect = 3e-93 Identities = 335/427 (78%), Gaps = 0/427 (0%) Strand=Plus/Minus Query 181574 GCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAA 181633 ||||||||| |||||||| || || | || ||||| || || ||||| || ||||| || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 181634 CTATGGTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTA 181693 ||| |||||||||||||||||||||||||| || ||||||||||| || || |||||||| Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 181694 CTTTGGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTT 181753 ||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 181754 CCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGC 181813 | | || |||||||| ||| | || |||||||| ||||| | || | ||||| ||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 181814 ATTTAACCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCT 181873 || ||||| || ||||||||||||||||| || | |||| ||||| || ||| | Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 181874 CAACACCTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCG 181933 | || ||||| ||||| ||||||| || | || |||||||||||||||||||| Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 181934 CAACGCGCACAACTTCCCGCTTGATCTTGCAGCAGCTGAGTCCACACCTGTGGCCTTGAT 181993 ||||| ||||||||||| | || | || || | ||| | |||||||| || | Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133 Query 181994 TGCTCCT 182000 ||| ||| Sbjct 132 TGCACCT 126 >seq7307 Length=548 Score = 223 bits (246), Expect = 4e-53 Identities = 333/470 (71%), Gaps = 2/470 (0%) Strand=Plus/Plus Query 182905 TCCATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTG 182964 |||| ||||||||||| || ||| |||| |||||||| || | |||| || || || | Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 182965 TCACAGTAGAGAATACCTTGTATGAAGATGGAGAA-CAGGCAAACACATTTAAAGCGTTC 183023 ||||||||| || ||||| | |||||| || ||| || |||| || || || ||| Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAA-ACCTTCCGCGCCTTC 119 Query 183024 GATTCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAA 183083 | | ||| || | || || ||||| || ||||| |||||||| || || |||||||| Sbjct 120 AACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAG 179 Query 183084 ATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCT 183143 || ||||| | || || ||| || || ||||| |||||||| ||| ||||||| || Sbjct 180 ATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCA 239 Query 183144 GTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCT 183203 |||| || | ||| | | || | || ||| | || | || | || || || ||| Sbjct 240 GTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCT 299 Query 183204 TATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTAC 183263 || || || || ||||| | | ||||||||||| || || || || || ||||| Sbjct 300 TACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTAT 359 Query 183264 ACAAAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCA 183323 || || ||||| | || || || || | || |||||| |||| ||| ||||| || Sbjct 360 ACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCT 419 Query 183324 CATGAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 || ||| | || | ||||| || || ||||||||| | |||||||| || Sbjct 420 CACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCT 469 >seq7318 Length=447 Score = 178 bits (196), Expect = 2e-39 Identities = 239/333 (72%), Gaps = 0/333 (0%) Strand=Plus/Plus Query 182742 AATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTCCTCATCTATCCT 182801 ||||| || || ||||||||||| |||||||| || || ||| || || || ||||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 182802 TTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTC 182861 |||| ||| | ||||||||| ||||| |||||||| || || || || | ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 182862 CTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCCATATGATGGGAGTT 182921 | | || |||| || || || || ||||| | ||||| || ||||||||||||||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 182922 GCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCACAGTAGAGAATACC 182981 || ||| || |||| | || ||||| | ||||| ||||||| || ||||| ||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 182982 TTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATTCCACTCAGGAGGAG 183041 || | ||||||||| || ||||| ||||| || || | | ||||| | || Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 183042 GAGACCTATTCGATGGTTACAGCGAATCGTTTT 183074 || || ||||| ||||| || || || || ||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTT 333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614549077820320