Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 513 2e-140
seq7678 322 7e-83
seq7307 239 7e-58
seq7318 161 1e-34
>seq8857
Length=8770
Score = 513 bits (568), Expect = 2e-140
Identities = 688/952 (72%), Gaps = 4/952 (0%)
Strand=Plus/Minus
Query 174495 AATCGTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCCGCAACT 174554
|| || |||||| | || ||||| |||||| | ||||| ||||| || || ||||||||
Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 6344
Query 174555 GTATGT-TTCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAATCCGTGA 174613
| ||| || || || || ||| | | |||||| ||||| || || || || || |||||
Sbjct 6343 -TCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285
Query 174614 ACCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTAG 174673
||| || |||| || | | || |||||||| || ||||| ||||| || ||||||
Sbjct 6284 ACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTAC 6225
Query 174674 TTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGACGAATG 174733
||| || |||||| | ||||| || ||||| |||||||| || | | || |||||
Sbjct 6224 TTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATG 6165
Query 174734 GCTCTACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTATCTACGC 174793
| | ||||| |||||||||| | ||| |||| | |||||| | | ||| |
Sbjct 6164 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTG 6105
Query 174794 CTATATGGGACGTGAGTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGGATCTGTGT 174853
|| ||||| |||||||||||||| || ||| | |||||| | |||||||| |||
Sbjct 6104 TTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 6045
Query 174854 AGCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCTTTCGGTCA 174913
|| || || || || |||||||| ||| | || || ||| | | || || | |||||
Sbjct 6044 TGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCA 5985
Query 174914 AGGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCAACTACATGTTGGT 174973
||| || || || | ||||| | || || ||||| || ||||||| ||| | ||
Sbjct 5984 AGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGT 5925
Query 174974 CTTCCAAGCAGAACATAACATCTTGATGCACCCCTTCCACATGTTGGGAGTCGCAGGTGT 175033
||||| || ||||| |||||| | |||||||| || |||||||| || || || |||||
Sbjct 5924 ATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 5865
Query 175034 CTTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCACTTGTTACCTCTTCACTTG-TCC 175092
|| ||||| || | || || ||||||||||| |||| || || | ||| ||
Sbjct 5864 ATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGATCA 5806
Query 175093 GTGAGACAACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGCCAAGAAGAAGAGA 175152
| || || || |||| ||| || || | |||||||| ||||| ||||| ||||| |
Sbjct 5805 GGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAA 5746
Query 175153 CCTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCAT 175212
| ||||| || || || || ||||| || || || || |||||||||||||| || |
Sbjct 5745 CTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTT 5686
Query 175213 TCAACAACTCACGCTCACTCCACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTATCTGGT 175272
|||||||||| || || | || ||||||||||| || ||||| ||| | ||||| ||||
Sbjct 5685 TCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGT 5626
Query 175273 TCACCGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATGGTTTCAACTTCAACCAGT 175332
| || || | ||| || || ||||| ||||| | ||||||||||| ||||| || |
Sbjct 5625 TTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAAT 5566
Query 175333 CTGTTATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGGATGTTCTTAACAGAGCTG 175392
|||| | || | |||||| | ||| | || ||||| || ||| | ||||| | |||
Sbjct 5565 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTA 5506
Query 175393 GTCTTGGGATGGAAGTAATGCATGAGAGAAATGCACACAACTTCCCACTAGA 175444
||||| |||||||| |||||||| | ||||| || |||||||| |||||
Sbjct 5505 ACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 5454
>seq7678
Length=557
Score = 322 bits (356), Expect = 7e-83
Identities = 329/427 (77%), Gaps = 2/427 (0%)
Strand=Plus/Minus
Query 175061 GCATGGTTCACTTGTTACCTCTTCACTTGTCCGTGAGACAACTGAAACTGAGTCACAGAA 175120
||| ||||| | ||||| || || | || ||||| || || ||||| || ||||| ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 175121 CTATGGTTACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGGCTA 175180
||| |||||||||||||| ||||||||||| ||||| |||||||| || || || || ||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 175181 CTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTTCTT 175240
||| ||||| |||||||||||||||||||| ||||||||| || ||||| ||||||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 175241 CTTAGCCGCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCACAATGGC 175300
||| || ||||||||||| | ||||||||||| ||||| | ||| | |||||||||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313
Query 175301 ATTCAACCTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTAGAGTATT 175360
|||||||| || || |||||||||||||| || || ||||| |||||| | || |
Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253
Query 175361 GAACACCTGGGCGGATGTTCTTAACAGAGCTGGTCTTGGG-ATGGAAGTAATGCATGAGA 175419
|| ||||| || || | ||| | ||| |||||| |||||||| ||||| |||
Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAA-CTTGGGTATGGAAGTCATGCACGAGC 194
Query 175420 GAAATGCACACAACTTCCCACTAGATTTGGCAGCAGCTGAGTCCACACCAGTGGCTCTAA 175479
| || || ||||||||||| |||| ||||| || | ||| | || |||||| |||
Sbjct 193 GTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAA 134
Query 175480 TTGCACC 175486
||||||
Sbjct 133 CTGCACC 127
>seq7307
Length=548
Score = 239 bits (264), Expect = 7e-58
Identities = 335/468 (72%), Gaps = 4/468 (1%)
Strand=Plus/Plus
Query 176395 TCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGGCG 176454
|||| ||||||||||| || ||| |||| |||||||| ||| | | ||| || || || |
Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60
Query 176455 TTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTTCG 176514
|| || ||||| ||| ||| |||||| || ||| ||| |||||| || |||
Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120
Query 176515 ATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCAAA 176574
| | ||| || | ||||| ||||| || ||||| || |||||||| |||||||| || |
Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180
Query 176575 TCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCCTG 176634
| ||||| | || || || || || ||| | |||||||| ||| ||||||| || |
Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240
Query 176635 TCATGGGTCTTTGG--GTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGC 176692
||| || | ||| | | |||| || ||| | || | || | || || || ||
Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTA--GGAATCGTGGGTTTAGCATTGAACCTCCGGGC 298
Query 176693 TTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTCTA 176752
||| || || || |||||| | | ||||||||||| || || |||||||| |||||
Sbjct 299 TTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTA 358
Query 176753 CACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAACC 176812
|| || ||||| | || ||||| || | | || |||||||| ||| ||||| ||
Sbjct 359 TACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCC 418
Query 176813 ACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860
|| || ||||||||||||||| || ||||||||| | ||||||||
Sbjct 419 TCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGC 466
>seq7318
Length=447
Score = 161 bits (178), Expect = 1e-34
Identities = 235/332 (71%), Gaps = 0/332 (0%)
Strand=Plus/Plus
Query 176232 AACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAGTGTGTTTCTTCTATACCCA 176291
|| || || ||||| |||||| || ||||| ||||| ||| ||||| | || |||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 176292 CTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGTGGCAGCAATCTTTAGATTC 176351
|| ||||| || ||||| ||||| || |||||||| ||||| || ||| | |||
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 176352 CTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAACCCCTTCCATATGATGGGAGTT 176411
| | ||| |||| || || || || ||||| ||||||| || |||||||||||||||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 176412 GCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGGCGTTACTGTTGAAAATACC 176471
|| ||| || | || | || || |||| || || ||||| | || || ||||||||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 176472 CTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTTCGATTCCACGCAGGAGGAA 176531
||| ||||||||| || || || ||| || || | | || || | |||
Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300
Query 176532 GAGACCTATTCGATGGTTACTGCGAACCGCTT 176563
|| || ||||| ||||| ||||| ||||||||
Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTT 332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729848221973720
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