Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq8857 506 2e-138 seq7678 356 3e-93 seq7307 232 8e-56 seq7318 203 4e-47 >seq8857 Length=8770 Score = 506 bits (560), Expect = 2e-138 Identities = 688/957 (72%), Gaps = 2/957 (0%) Strand=Plus/Minus Query 177876 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 177935 |||||||| || | || ||||| || || ||||||| || || | ||| | |||||| Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 6344 Query 177936 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 177994 ||||| || ||| | |||||| | |||||||| || || || || || || || ||||| Sbjct 6343 -TCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285 Query 177995 ACCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCATC 178054 ||| || |||| || | | || || ||||| || ||||| ||||| || |||| | Sbjct 6284 ACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTAC 6225 Query 178055 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 178114 ||| || || ||| | ||||| ||||| || |||||||| ||||| ||||||| || Sbjct 6224 TTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATG 6165 Query 178115 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTATCTATGC 178174 | | || || |||||||||| | || | || | |||||| | | ||| | | Sbjct 6164 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTG 6105 Query 178175 ATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGT 178234 |||||||| |||||||||||||| | |||| | ||||||||||| ||||| ||| Sbjct 6104 TTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 6045 Query 178235 AGCATACTCTGCTCCAGTAGCAGCAGCATCGGCAGTATTCCTGGTCTATCCTTTCGGTCA 178294 || || || ||||| || ||||| || | || || ||| || | || || | ||||| Sbjct 6044 TGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCA 5985 Query 178295 AGGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGT 178354 ||| |||||||| | ||||| || ||||| |||||||| ||||||| ||| |||| Sbjct 5984 AGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGT 5925 Query 178355 TTTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACATGTTGGGTGTCGCAGGTGT 178414 ||||| || ||||||||||| || |||||||| || |||||||| ||||| || ||||| Sbjct 5924 ATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 5865 Query 178415 ATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTTCG 178474 ||| ||||| || || || ||||| ||||| ||||| ||||| || ||| | | | Sbjct 5864 ATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 5805 Query 178475 TGAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGAC 178534 ||||| || |||| ||||| || | ||||| || ||||| ||||| ||||| || Sbjct 5804 GGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAAC 5745 Query 178535 ATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATT 178594 || || || || || || ||||| || || || || ||||||||||||||||| || Sbjct 5744 TTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTT 5685 Query 178595 CAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTT 178654 ||||||||| ||||| | || |||||| | || || ||||| || | || || ||||| Sbjct 5684 CAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTT 5625 Query 178655 CACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTC 178714 || || | || | || || ||||| || || | ||||| ||||| ||||| || || Sbjct 5624 TACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATC 5565 Query 178715 CATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGG 178774 | | || | ||||| ||||| | || || || || || | | ||||| || Sbjct 5564 TGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAA 5505 Query 178775 TCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGC 178831 || || |||||||| ||||| || || || || || |||||||| || || || || Sbjct 5504 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448 >seq7678 Length=557 Score = 356 bits (394), Expect = 3e-93 Identities = 335/427 (78%), Gaps = 0/427 (0%) Strand=Plus/Minus Query 178442 GCACGGTTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAA 178501 ||||||||| |||||||| || || | || |||||||| || ||||| |||||||| || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 178502 CTATGGTTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTA 178561 ||| ||||| |||||||||||||||||||| || ||||||||||| || ||||| || || Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 178562 CTTCGGTCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTT 178621 ||| ||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 178622 CCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGC 178681 | | || |||||||| ||| | || |||||||| ||||| | || | ||||| ||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 178682 ATTTAACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCT 178741 || ||||| || ||||||||||||||||| || | |||| ||||| || ||| | Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 178742 CAACACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCG 178801 | || ||||| ||||| ||||||| || | || |||||||||||||||||||| Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 178802 CAACGCGCACAACTTCCCGCTTGATCTTGCAGCAGCTGAGTCCACACCTGTGGCCTTAAT 178861 ||||| ||||||||||| | || | || || | ||| | |||||||| |||| Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133 Query 178862 TGCTCCT 178868 ||| ||| Sbjct 132 TGCACCT 126 >seq7307 Length=548 Score = 232 bits (256), Expect = 8e-56 Identities = 331/466 (71%), Gaps = 0/466 (0%) Strand=Plus/Plus Query 179767 TCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCTATCCATGGAG 179826 |||| ||||||||||| || ||| |||| || ||||| || | |||| || || |||| Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 179827 TTACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTG 179886 || ||||| || || || | |||||| || ||| | | || ||||| || || Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120 Query 179887 ATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGA 179946 | | || || | |||||| || || || ||||| || || ||||| |||||||| |||| Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180 Query 179947 TCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTG 180006 | |||||||| || || || ||||| |||||| | || || |||||| ||||||| || | Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240 Query 180007 TTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTT 180066 | | || | |||| | || | || || | ||| | || | ||||| || |||| Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTT 300 Query 180067 ACGATTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTTCTACA 180126 |||| |||||| || || | | ||||||||||| || || ||||| || ||||| | Sbjct 301 ACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATA 360 Query 180127 CCAAGAACATTCTTCTCAATGAAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCAC 180186 |||| |||||| | || || || || | || || ||| |||| || ||||| || | Sbjct 361 CCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTC 420 Query 180187 ATGAGTCATTCGTATTCCCAGAAGAAGTTCTGCCAAGAGGTAATGC 180232 | || ||| ||||||||||| || ||||| || | ||||| || Sbjct 421 ACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGC 466 >seq7318 Length=447 Score = 203 bits (224), Expect = 4e-47 Identities = 244/332 (73%), Gaps = 0/332 (0%) Strand=Plus/Plus Query 179604 AATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTTTTCCTCATCTATCCT 179663 ||||| || || ||||||||||| |||||||| || || ||| || || || ||||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 179664 TTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTC 179723 |||| ||| | ||||||||| ||||| |||||||| || || || || | ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 179724 TTGCTGTTCCTTCAGGGTTTCCACAACTGGACGCTCAACCCCTTCCATATGATGGGAGTT 179783 | || || |||| || || || || ||||| | ||||| || ||||||||||||||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 179784 GCTGGTATACTAGGAGGAGCACTGCTCAGTGCTATCCATGGAGTTACTGTAGAGAATACA 179843 || ||| || | || | || ||||| | ||||| ||||| | || ||||| ||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 179844 TTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAA 179903 || | ||||||||| || |||||||| || ||| ||| | | || || | ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 179904 GAGACTTATTCTATGGTCACTGCAAACCGCTT 179935 || |||||||| ||||||||||| |||||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605942037504720