Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq8857 540 1e-148 seq7678 343 2e-89 seq7307 237 2e-57 seq7318 203 4e-47 >seq8857 Length=8770 Score = 540 bits (598), Expect = 1e-148 Identities = 699/960 (73%), Gaps = 4/960 (0%) Strand=Plus/Minus Query 158406 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 158465 |||||||| || | || ||||| || || ||||||| || || | ||| | ||||| Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 6344 Query 158466 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 158524 ||||| || ||| | |||||| | |||||||| || || || || || || || ||||| Sbjct 6343 -TCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285 Query 158525 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 158584 ||| || |||| || | | || || ||||| || ||||| ||||| || | || | Sbjct 6284 ACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTAC 6225 Query 158585 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 158644 ||| || || ||| | ||||| ||||| || |||||||| ||||| ||||||| || Sbjct 6224 TTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATG 6165 Query 158645 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGC 158704 | | || || |||||||||| | || | || | |||||| | | || | | Sbjct 6164 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTG 6105 Query 158705 ATATATGGGACGTGAATGGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGT 158764 || ||||| ||||| |||||||| | ||| | ||||||||||| ||||| ||| Sbjct 6104 TTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 6045 Query 158765 AGCATATTCTGCACCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCA 158824 || ||||| || || || || || || ||||||| ||| | | || || | ||||| Sbjct 6044 TGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCA 5985 Query 158825 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 158884 ||| || || |||| ||||||||| || || ||||||||||| |||| ||| |||| Sbjct 5984 AGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGT 5925 Query 158885 ATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGT 158944 |||||| || ||||||||||||||||||||||| || || ||| | ||||| ||||| || Sbjct 5924 ATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 5865 Query 158945 ATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTC- 159003 ||| ||||| || || || |||||||||||| | || ||||| | | | || Sbjct 5864 ATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGATCA 5806 Query 159004 GTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAA 159063 | ||||| || |||| || || || | |||||||| ||||| ||||| ||||||| Sbjct 5805 GGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAA 5746 Query 159064 CATATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCAT 159123 | |||||||| || || || |||||||| || || || |||||||||||||| || | Sbjct 5745 CTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTT 5686 Query 159124 TCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGT 159183 |||||||||| ||||| || || |||||| | ||||| ||||| ||| |||| || |||| Sbjct 5685 TCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGT 5626 Query 159184 TCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 159243 | || || | || | || ||||| ||||| | || |||||||| ||||| || | Sbjct 5625 TTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAAT 5566 Query 159244 CCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGTGCAG 159303 | | ||||| |||| |||||||| | || ||||| || ||| | | ||||| || Sbjct 5565 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTA 5506 Query 159304 GTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTG 159363 || |||||||||||||||||||| ||||| || || |||||||| || ||||| |||| Sbjct 5505 ACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 343 bits (380), Expect = 2e-89 Identities = 327/416 (79%), Gaps = 4/416 (1%) Strand=Plus/Minus Query 158985 GTTACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAG 159044 ||||||||||| | || |||||||| || ||||| || ||||| ||||| ||||||||| Sbjct 539 GTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTACAAG 480 Query 159045 TTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTG 159104 |||||||||||||||||||| || || ||||| || || || |||||||| ||||| ||| Sbjct 479 TTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGGTTG 420 Query 159105 ATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGG 159164 ||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||| Sbjct 419 ATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCATGG 360 Query 159165 CCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCATTCAACCTGA 159222 || || |||| |||||||| ||||| | || | ||| || ||||| |||||||||| Sbjct 359 CCAGTAATCGGTATCTGGTTTACCGCTTTAGG--TATCAGCACAATGGCGTTCAACCTGA 302 Query 159223 ACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGG 159282 |||| |||||||||||||| || | | ||| ||| ||||| || | || |||| Sbjct 301 ACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGGG 242 Query 159283 CAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACA 159342 | || ||| | ||||| || ||||||||||||| ||||| ||||||||||| |||| Sbjct 241 CTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCACA 182 Query 159343 ACTTCCCACTCGACCTTGCTGCTGCTGAGTCAACTCCTGTTGCACTTTCAGCACCT 159398 ||||||| | ||| | ||||||| ||| ||||||| || | | |||||| Sbjct 181 ACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCT 126 >seq7307 Length=548 Score = 237 bits (262), Expect = 2e-57 Identities = 340/477 (71%), Gaps = 4/477 (1%) Strand=Plus/Plus Query 160443 TCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCCATCCATGGCG 160502 |||| ||||||||||| || ||| |||| || ||||| || | ||||||| || || | Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 160503 TTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTG 160562 || ||||| ||||| | | |||||| || ||| | | || ||||| || || Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120 Query 160563 ATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGA 160622 | | || || | |||||| || || || ||||| || || ||||| |||||||| |||| Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180 Query 160623 TCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTG 160682 | |||||||| || || || ||||| |||||| | || || |||||| ||||||| || | Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240 Query 160683 TTATGGGTCTTTGGACATC--CAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGC 160740 | | || | |||| | ||||| || || | ||| | || | || || || || Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTA--GGAATCGTGGGTTTAGCATTGAACCTCCGGGC 298 Query 160741 TTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTA 160800 |||||| ||||| ||||| | | ||||||||||| ||||||||||| || ||||| Sbjct 299 TTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTA 358 Query 160801 CACCAAGAACATCCTACTGAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCAACC 160860 ||||| ||||| | ||||| || || | || || ||| | || ||| || || || Sbjct 359 TACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCC 418 Query 160861 CCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAATA 160917 || || | ||| | |||||||| || ||||| ||| | || ||||| || ||||| Sbjct 419 TCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATA 475 >seq7318 Length=447 Score = 203 bits (224), Expect = 4e-47 Identities = 244/332 (73%), Gaps = 0/332 (0%) Strand=Plus/Plus Query 160280 AATGCTATTGCGTTCTCTGGTCCTATTGCTGTCTTTGTCAGCGTATTCCTCATCTACCCA 160339 ||||| || || || |||||||| |||||||| ||||| ||||| || || || ||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 160340 TTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTC 160399 |||||||| | |||||||||| || || ||||| || ||||| || ||| | ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 160400 CTGTTGTTCCTTCAAGGATTTCACAACTGGACGCTTAACCCCTTCCATATGATGGGAGTT 160459 | | || ||||||| ||||| || ||||| | ||||| || ||||||||||||||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 160460 GCTGGTATACTAGGAGGAGCACTGCTCAGTGCCATCCATGGCGTTACTGTAGAGAACACA 160519 || ||| || | || | || ||||| | || || ||||| | || ||||| || || Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 160520 CTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAA 160579 | | ||||||||| || |||||||| || ||| ||| | | || || | ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 160580 GAGACTTATTCTATGGTCACTGCAAACCGCTT 160611 || |||||||| ||||||||||| |||||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552412006099520