Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq8857 540 1e-148 seq7678 325 5e-84 seq7307 223 4e-53 seq7318 221 1e-52 >seq8857 Length=8770 Score = 540 bits (598), Expect = 1e-148 Identities = 691/947 (73%), Gaps = 4/947 (0%) Strand=Plus/Minus Query 178901 TTGGTTGGTTCGGTGTGCTGATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATC 178959 |||| ||||| ||||| ||||||| ||||| || | | |||||| ||||| || ||| Sbjct 6390 TTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATC 6332 Query 178960 GTTGCTTTCGTAGCAGCACCTCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGT 179019 | || ||| | || || ||||| || |||||||| || || |||||||| || |||| Sbjct 6331 ATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGA 6272 Query 179020 TCACTCATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATT 179079 || | | || |||||||| || ||||| ||||| || | || | ||| || || Sbjct 6271 TCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATC 6212 Query 179080 GGTCTACACTTCTACCCCATCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGT 179139 ||| | ||||| || || || |||||||| ||||| | ||||| ||| | || || ||| Sbjct 6211 GGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGT 6152 Query 179140 GGTCCTTTCCAACTGGTAGTCTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGT 179199 ||||||| | || | || | |||||| | | || | | || ||||| ||| Sbjct 6151 GGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGT 6092 Query 179200 GAGTGGGAACTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCA 179259 ||||||||||| || |||||| |||||||| || ||||| |||||| || || || Sbjct 6091 GAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCT 6032 Query 179260 CCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCT 179319 || || || ||||| | ||| || ||| | | || || | |||||||| || ||| Sbjct 6031 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCT 5972 Query 179320 GATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAA 179379 |||| ||||||||| || || ||||||||||| |||| ||| |||||||||| || ||| Sbjct 5971 GATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAA 5912 Query 179380 CACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCT 179439 |||||||||||||||||||| || || ||| | ||||| ||||| ||||| ||||| || Sbjct 5911 CACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCC 5852 Query 179440 CTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGA 179498 || || ||||||||| || | || ||||| | | ||| || | ||||| || || Sbjct 5851 CTATTTAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACTACAGA 5793 Query 179499 GACAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGT 179558 | || || || | ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 5792 AAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGT 5733 Query 179559 CGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACG 179618 || || ||||| || || || || |||||||||||||||||| || |||||||| || Sbjct 5732 AGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCG 5673 Query 179619 CTCTTTGCACTTCTTCCTTGCTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGG 179678 ||||| || |||||| | ||||| ||||| ||| |||| || ||||| |||||| | || Sbjct 5672 TTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGG 5613 Query 179679 CGTGTCAACCATGGCGTTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGG 179738 | || ||||| ||||| | || |||||||| ||||| || || | |||| | Sbjct 5612 TATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAG 5553 Query 179739 TCAAGGACGTGTCCTTAACACATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGA 179798 |||||| ||||| |||| || || || || | | ||||| || | |||||||| Sbjct 5552 TCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGA 5493 Query 179799 AGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTG 179845 |||||||||||| ||||| || || |||||||| || ||||| |||| Sbjct 5492 AGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 325 bits (360), Expect = 5e-84 Identities = 306/388 (79%), Gaps = 4/388 (1%) Strand=Plus/Minus Query 179467 GTTACTTCCTCGCTTGTTCGTGAAACAACTGAGACAGAGTCACAGAACTATGGTTATAAG 179526 ||||||||||| | || |||||||| || || || || ||||| ||||| ||||| ||| Sbjct 539 GTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTACAAG 480 Query 179527 TTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTG 179586 ||||||||||||||||| ||||| |||||||| || ||||| || ||||| ||||| ||| Sbjct 479 TTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGGTTG 420 Query 179587 ATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGG 179646 ||||||||||| || ||||| |||||| || || ||||||||||| | ||||| ||| Sbjct 419 ATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCATGG 360 Query 179647 CCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCA--ACCATGGCGTTCAACCTCA 179704 || || |||| |||||||| || ||| | || | ||| || |||||||||||||| | Sbjct 359 CCAGTAATCGGTATCTGGTTTACCGCTTTAGG--TATCAGCACAATGGCGTTCAACCTGA 302 Query 179705 ACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACACATGGG 179764 |||| |||||||||||||| || | | || |||||| || ||| | || |||| Sbjct 301 ACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGGG 242 Query 179765 CGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACA 179824 | |||||| | ||||| || |||||||||||||| ||||| ||||||||||| |||| Sbjct 241 CTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCACA 182 Query 179825 ACTTCCCACTCGACCTTGCTGCTGCTGA 179852 ||||||| | ||| | ||||||| ||| Sbjct 181 ACTTCCCCTTAGACTTGGCTGCTGGTGA 154 >seq7307 Length=548 Score = 223 bits (246), Expect = 4e-53 Identities = 329/466 (71%), Gaps = 0/466 (0%) Strand=Plus/Plus Query 180565 TCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAGCAATCCATGGCG 180624 |||| ||||||||||| || ||| |||| |||||||| | | | || || || || | Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 180625 TAACTGTGGAGAACACACTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTG 180684 || || || ||||| | | |||||| || ||| | | || ||||| || || Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120 Query 180685 ATTCAACGCAAGAGGAGGAAACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGA 180744 | | || |||| || ||||| ||||| ||||| || || ||||| |||||||| |||| Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180 Query 180745 TCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTG 180804 | |||||||| || || || ||||| |||||| | || || |||||| ||||||| || | Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240 Query 180805 TTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTT 180864 | | || | |||| | || | || || | ||| | || | ||||| || |||| Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTT 300 Query 180865 ACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACA 180924 |||| ||||| ||||| | | ||||||||||| || || || || || ||||| | Sbjct 301 ACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATA 360 Query 180925 CCAAGAACATCCTATTGAATGAAGGACTACGTGCATGGTTGGCACCTGCCGATCAACCAC 180984 |||| ||||| | |||| || || | || || ||| |||| ||| ||||| || | Sbjct 361 CCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTC 420 Query 180985 ACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAACGC 181030 ||||| | || | ||||| || || |||||||| | |||||||| Sbjct 421 ACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGC 466 >seq7318 Length=447 Score = 221 bits (244), Expect = 1e-52 Identities = 248/332 (75%), Gaps = 0/332 (0%) Strand=Plus/Plus Query 180402 AATGCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCA 180461 ||||| || ||||| |||||||| || ||||| ||||| |||||||| || || ||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 180462 CTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTC 180521 ||||||||| | ||||||| ||||| || |||||| |||||||| || ||| | ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 180522 CTACTCTTTCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTT 180581 | || ||| |||| || || || || |||||| | ||||| || ||||||||||||||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 180582 GCTGGTATACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACA 180641 || ||| || | || | || |||||| || || ||||| | || || || || || Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 180642 CTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAG 180701 | | ||||||||| || ||||| || || ||| ||| | |||| |||| || Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 180702 GAAACTTACTCTATGGTCACTGCAAACCGCTT 180733 |||||||| || ||||||||||| |||||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610261555878720