Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq6248 111 1e-19
seq1626 93.3 4e-14
>seq6248
Length=918
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079
||| || |||| |||| ||||| || ||||| || || || || || ||||||||
Sbjct 814 GCCGCCACGCAGACGCAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCAGA 755
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| | ||| | || || ||||| || || || | || ||||||||||| || || ||
Sbjct 754 GAGAGTACGCCCATCCTCCAGCTGCTTTCCTGCAAAGATAAGACGCTGTTGGTCTGGTGG 695
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| |||||| || || |||||| | |||| | | || | |||||||| | ||| ||
Sbjct 694 GATACCCTCCTTGTCCTGAATCTTGGTCTTCACGTTGTCGATAGTGTCTGAAGATTCCAC 635
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || | |||||||||| || || || ||||||||||||
Sbjct 634 CTCGAGTGTAATCGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCATA 586
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
||||| || || ||||| ||||||||| || | || | || || || || || ||
Sbjct 555 GTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGTTGCTTTCCA 496
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| | || ||||||||||| || || || | ||||| || || |||||| | ||
Sbjct 495 GCAAAGATCAGACGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTG 436
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | |||||| | || |||||| || || || || | ||||| || || ||
Sbjct 435 ACGTTGTCGATAGTGTCGGAGGATTCAACCTCGAGTGTGATGGTCTTGCCAGTAAGTGTC 376
Query 27231 TTCACAAAGATTTGCATA 27248
|| || ||||| ||||||
Sbjct 375 TTGACGAAGATCTGCATA 358
>seq1626
Length=97905
Score = 93.3 bits (102), Expect = 4e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| | ||| || |||||||| || || || |||||||| ||||||||| |
Sbjct 62564 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 62623
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | | ||||||| | || ||||| || | || | | ||||| || || ||
Sbjct 62624 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 62683
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||| ||||| || |||||| ||| | | || | ||||| | | |||||||
Sbjct 62684 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACT 62743
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAG 27239
|||||||| || | ||| || |||| ||| || || |||
Sbjct 62744 TCTAGAGTGATGGTTTTACCAGTCAAAGTCTTAACGAAG 62782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424888209497928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |