Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_027996.1 Length=175720 Score E Sequences producing significant alignments: (Bits) Value seq6607 376 3e-99 >seq6607 Length=452 Score = 376 bits (416), Expect = 3e-99 Identities = 316/403 (78%), Gaps = 14/403 (3%) Strand=Plus/Plus Query 161531 AAATAGAACAATGGCTTATGTTGATGGCACAACTGGAAATCAAGGTGGTTACAGATGTGT 161590 ||||||||||||||||||||||||||| ||||| | |||||| ||||||||| ||| | Sbjct 1 AAATAGAACAATGGCTTATGTTGATGGGTCAACTAGTAATCAACGTGGTTACAAATGCGG 60 Query 161591 TTGTGATATTAACACAAATAGACAAGTTACTTGTTCTGCTAATAGAGAATACAAATACGT 161650 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 61 TTGTGATCTTAACACAAATAGACAAGTTACTTGTGCTGCTAATAGAGAATACAAATACGT 120 Query 161651 CACTGACTACACTCAATTTCAAAACAAAAAATACAATT---------NNNNNNNNNNNNN 161701 |||||||||| ||||||||||||| ||||||||||||| Sbjct 121 CACTGACTACCCTCAATTTCAAAATAAAAAATACAATTAAAATACAATCAAATACAATCA 180 Query 161702 NNNNNNNNNNGCTTGAAGTTCTTAAAAAGAGCTTCAATGC--TTTTAAAATTTAAGATTA 161759 ||||||||||||| || |||||||||||| |||||||||||||| | Sbjct 181 CACCCAATTAGCTTGAAGTTCTT-AACCGAGCTTCAATGCTTTTTTAAAATTTAAGGT-- 237 Query 161760 AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTTAAGTCAAAATATATTATAATTA 161819 | ||||||||||||||||||||||||||||| Sbjct 238 CAGCGATTTAAAATAAAGCTAAAGCTTAAAATATTTTTAAGTCAAAATATATTATAATTA 297 Query 161820 TTTCATCAAAGATGTATATGAAGGAGATAGAATGAATTATTTAGAACTAAAAAATATGGC 161879 ||||||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||| Sbjct 298 TTTCATCAAAGCTGTATATGAAGGAGACCGAATGAATTGTTTAGAACTTAAAAATATGGC 357 Query 161880 AGAGAATTTAAAAGATTCTAATTATAGATCAACAAAATTAAAT 161922 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 AGAGAATTTAAAAGATTCTAATTATAGATCAACAAAATTAAAT 400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562113324403200