Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_027997.1 Length=177534 Score E Sequences producing significant alignments: (Bits) Value seq6607 477 1e-129 >seq6607 Length=452 Score = 477 bits (528), Expect = 1e-129 Identities = 373/455 (82%), Gaps = 14/455 (3%) Strand=Plus/Plus Query 162377 AAATAGAACAATGGCTTATGTTGATGGATCGACTGGAAATCAAGGTGGTTACAGATGCGT 162436 ||||||||||||||||||||||||||| || ||| | |||||| ||||||||| ||||| Sbjct 1 AAATAGAACAATGGCTTATGTTGATGGGTCAACTAGTAATCAACGTGGTTACAAATGCGG 60 Query 162437 TTGTGATATCAACACAAATAGACAAGTTGCTTGTTCTGCCAATAGAGAATATAAATATGT 162496 ||||||| | |||||||||||||||||| ||||| |||| ||||||||||| ||||| || Sbjct 61 TTGTGATCTTAACACAAATAGACAAGTTACTTGTGCTGCTAATAGAGAATACAAATACGT 120 Query 162497 CACTGACTACACTCAATTTCAAAACAAAAAATACAATTAAGA--CNNNNNNNNNNNAT-- 162552 |||||||||| ||||||||||||| ||||||||||||||| | | || Sbjct 121 CACTGACTACCCTCAATTTCAAAATAAAAAATACAATTAAAATACAATCAAATACAATCA 180 Query 162553 -----AATCAGCTTGAAGTTCTTAAAAAGAGCTTCAATGCTTTT--AAAATTTAAGATCA 162605 ||| |||||||||||||||| |||||||||||||||| |||||||||| ||| Sbjct 181 CACCCAATTAGCTTGAAGTTCTTAACC-GAGCTTCAATGCTTTTTTAAAATTTAAGGTCA 239 Query 162606 AAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTTAAGTCAAAATATATTATAATTA 162665 | ||||||||||||||||||||||||||||| Sbjct 240 --GCGATTTAAAATAAAGCTAAAGCTTAAAATATTTTTAAGTCAAAATATATTATAATTA 297 Query 162666 TTTCACCAAAGATGTATATGAAGGAGATAGAATGAATTATTTAGAACTTAAAAATATGGC 162725 ||||| ||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct 298 TTTCATCAAAGCTGTATATGAAGGAGACCGAATGAATTGTTTAGAACTTAAAAATATGGC 357 Query 162726 AGAGAATTTAAAAGATTCTAATTATAGATCAACAAAATTAAATAATTTTAAATTCTATAC 162785 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 358 AGAGAATTTAAAAGATTCTAATTATAGATCAACAAAATTAAATAATTTTAAATTTTATAC 417 Query 162786 TTATATATTTTCAGATTATAAAAACTTCAAAGAAA 162820 ||||||||| || |||||||||||||||||||||| Sbjct 418 TTATATATTATCGGATTATAAAAACTTCAAAGAAA 452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567917477240560