Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2922 297 2e-75 seq3690 208 1e-48 seq2974 87.8 2e-12 seq4210 86.0 8e-12 >seq2922 Length=128268 Score = 297 bits (328), Expect = 2e-75 Identities = 910/1391 (65%), Gaps = 46/1391 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || | ||| |||||| || |||||||||| |||||| ||||| | ||||| Sbjct 123179 GTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGA 123120 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823 || || |||||||||||||| || || | | | || ||| | || | |||| | Sbjct 123119 TGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCT 123062 Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 || ||| || ||||| || | || | || || |||||||| |||||||| Sbjct 123061 TTTCTTAAGGTG-TCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTG 123003 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941 || | ||||| || || ||||| || | || ||||| || | ||| | |||| | Sbjct 123002 TAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGA 122945 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | |||||| || |||| ||| || ||||| || ||||||||||| | ||| Sbjct 122944 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 122885 Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 | | |||||| || |||||||||| | || ||| || || || |||||| Sbjct 122884 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 122825 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 ||||||||||||||| |||| ||||| |||| |||||| || |||| ||| ||||| Sbjct 122824 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 122765 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 || || |||| | |||||||||| ||||| ||| ||||||| || | |||||| Sbjct 122764 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 122705 Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCT---------------CTTCATTGACATAC 111226 || | ||||| | | | ||| ||||| |||| ||| || | Sbjct 122704 TGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC 122646 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 ||| | ||| | || ||||| || |||||||| || ||||| | ||| ||| || Sbjct 122645 --TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCA 122588 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | |||||| |||||||| || ||| || || || || ||||| ||| || Sbjct 122587 ACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTT 122528 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 |||| || ||||||||||| | | | | || || || || || || || | || | | Sbjct 122527 CTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAA 122468 Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466 || | | ||| | || || | | || | || | || || || |||||| Sbjct 122467 ATGGAATACCATA-ATTTTTGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAG 122411 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTC 111525 || || || || |||||||| ||||| ||| | ||| || || ||| Sbjct 122410 CGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT- 122352 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 |||| |||| | | ||| ||| ||| || || |||||||||||||| || ||||| Sbjct 122351 TGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAAT 122292 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| || | | || | |||||| ||| || || | ||| ||||| || ||| Sbjct 122291 CCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAA 122233 Query 111646 -CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAG 111698 |||| || || | ||||| || |||||||| || || || | || | || Sbjct 122232 TATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 122173 Query 111699 ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 || ||| | ||| | || | ||||| || || ||| || || || |||| || Sbjct 122172 GTCTCTTGTTA---CCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCA 122116 Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818 | ||||| | ||| | || ||| ||||| || ||| ||| | | | | | Sbjct 122115 TAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAA 122056 Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878 | |||||| || | |||||||| ||||| || || || ||||| ||| | | Sbjct 122055 TGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCA 121996 Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938 || | || || || | ||| ||||||||||| |||| | | ||| ||| ||||| Sbjct 121995 AGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACA 121936 Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 111998 | || ||| |||| ||||| |||||||| | ||||| | |||||| | || ||| || Sbjct 121935 TTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTT 121877 Query 111999 -GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 | |||||| || || || || || ||| || || |||| ||||||||||| | | Sbjct 121876 AGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTTTACCGTGGATGCCTAGT 121817 Query 112058 GCGACCCGCAT 112068 ||||| | ||| Sbjct 121816 GCGACTCTCAT 121806 >seq3690 Length=234713 Score = 208 bits (230), Expect = 1e-48 Identities = 890/1385 (64%), Gaps = 40/1385 (3%) Strand=Plus/Plus Query 110725 TGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGC 110784 |||||| || || || || | ||| ||||| || | ||||| || || ||||| ||||| Sbjct 182895 TGGTTCGAAACACTCGTTGTAACCTAAGATCTGAGATGTGGATGCAGTAGGCATAGGTGC 182954 Query 110785 CATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAG 110842 ||| ||||| ||| | || ||| | |||| ||||| | | ||| ||||| Sbjct 182955 CATGGTCAAAGA--GTTTCTAATACCATGCTCCATGATGTTATTTCTCAGAGTGTCCCAA 183012 Query 110843 TCGTAGTTGAGCT-TGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGC 110901 || | | | |||||| | |||||||||| || ||||| | ||||| || || Sbjct 183013 TCCCACATACCGTATGGTTTTTGGT-CCCACATGTCGAATTGAAGTATACCTTGAGAAGC 183071 Query 110902 GGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 110961 || || || | ||||||||| || | || | || ||| |||||||| || || Sbjct 183072 CGGGGAGCCTTTAAAGGTTTCGTATGGGCCATCTCTTTGAGCTAATTCACAAGAAGCTTC 183131 Query 110962 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA-TCTCCTTGGCTTCATCTG 111020 || ||| || || || || ||||| ||||| || ||| | | | | ||||| |||| Sbjct 183132 CATGGAGGCATGGTAGATAGTTTCGAAGATTTGAATATTTAGTAAGCGT-GCTTCTTCTG 183190 Query 111021 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 111080 | || |||| | || |||| || || || || | |||||| ||||||||| ||| Sbjct 183191 AGTCGAATGGCAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAA 183250 Query 111081 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 111140 | || || |||| ||||||||| ||| || ||| || |||||| | || | ||||| Sbjct 183251 TCGGCCTATGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAA 183310 Query 111141 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG-TTTTTCA-----T 111194 | || ||||| || |||| || || | |||||||| || ||||| | | Sbjct 183311 TAACGTTGTTTAAGTTACGAGTAATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTGT 183370 Query 111195 AATCAAAAGTGCGAGTCTCTTCA----TTGACATACTT--TGGAAGGGCGATTGATGCCA 111248 | | |||| |||||| || ||| | ||| | || | || |||| Sbjct 183371 ATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCA 183430 Query 111249 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGG 111308 | || |||||||| |||||||| | | | ||| || | |||||| || || || | Sbjct 183431 AGTTACAAACAGCAGTCTCATCTGGAGCAGAGTATTCAACAATTTCACAGCACAAATTAG 183490 Query 111309 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGA 111368 | ||| || ||||| ||||||||||| ||| |||| || ||||||||||| | Sbjct 183491 ATGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAA 183550 Query 111369 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCG 111427 | | || || || || ||||| |||| || | |||| | ||| || | | | Sbjct 183551 CAACAAATGGTGTACCAGTTTCCGTTTGTGCTTCCAAGATAGAGTACCATAATTTTTGGG 183610 Query 111428 GCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487 || | || | || | || || || ||||| || || |||||||| || Sbjct 183611 CCTTG----ATAGTCTTACCACGACCTTCTTTTTCGTAACGGGTATATAGGGCTTCGAAT 183666 Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCATTG 111546 || ||||| ||| | ||||| || ||| ||| |||| | || ||| Sbjct 183667 TCATCACCGTAACAGTCACTCAAGCCTGGGGCAGATGT-AGGAGAGAATAAAGTCCAAGT 183725 Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 111606 || ||| || || |||||||||||||| ||||||| ||| || | | || | ||| Sbjct 183726 GCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACCCATAGAGCAGGGAATAAATC 183785 Query 111607 TCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 111665 ||| ||| || ||||| | ||| || || || | || | ||| || | ||||| Sbjct 183786 TCTCGCACGGA-TTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATAT 183844 Query 111666 CCGCGTGCCATGGCTC--AAGATAG----ACTGCGATAGATCCCTTTCGACGCCCAGCTT 111719 | |||||||||||||| || |||| | || || || ||| | ||| ||| Sbjct 183845 CAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTA---CCACCTT 183901 Query 111720 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 111779 | | ||||| || || || ||| || || || | ||| ||||| | || | || Sbjct 183902 GGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAG 183961 Query 111780 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 111839 || ||||| || ||| ||| | || | | | ||||| || | |||| Sbjct 183962 TCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGGATATGTAGACCAA 184021 Query 111840 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 111899 |||| ||||| || || || ||||| ||| | | ||| | || ||||| | | Sbjct 184022 TACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAAGTATCGTAAATACCTTCAA 184081 Query 111900 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 111959 | || || ||||| | || | | ||| || |||||| || || |||| ||||||| Sbjct 184082 TGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTTGAGGCTTTGGAGTACCAG 184141 Query 111960 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTC 112018 | ||||| | ||||| | || ||| | || || || | ||||| || || || Sbjct 184142 CGTTGAATAAAGTTGGAGAGGCATGAGT-AAAGTATTTTAGAGACATTAAGTTATAGGTT 184200 Query 112019 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTAC 112078 || || | | ||||||| ||| ||||| || || | ||||| | ||||| | || | Sbjct 184201 TCTAAAGCGGCCTCAATGTTTTCACCGTGAATACCTAGGGCGACTCTCATGATTAAGTGC 184260 Query 112079 TGTGG 112083 ||||| Sbjct 184261 TGTGG 184265 >seq2974 Length=151892 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 11705 GCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGAT-GAATGGGAC 11763 |||||||| ||||||||||| ||||| || | | |||| ||| | | ||| || || Sbjct 92343 GCACCCACCCCAACAAACATTTCCACGAACTCGGAACCAGA-CACGGAAAAGAAGGGCAC 92401 Query 11764 ATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGC 11823 || | || |||||| |||| ||| | ||||||||| || |||||||| || | Sbjct 92402 GTTGGCCTCGCCCGCGGTGGCCTTGGCCAAGAGGGTCTTACCGGTACCTGGAGGCCCGGA 92461 Query 11824 GAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 |||| ||||||||||||||| ||||| || Sbjct 92462 AAGAATGGCGCCTCGGGGGATTTTGGCGCC 92491 >seq4210 Length=586 Score = 86.0 bits (94), Expect = 8e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 11624 CCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCA 11683 || ||||| |||| ||| |||||||||| || ||| || | ||| || Sbjct 257 CCGACCGCGTCAAGCTCGTCAATGAAGATGATGGCGGGTGACTTGGCCTTGGCTGCGGCA 198 Query 11684 AAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCA 11743 ||||| |||||||| | |||||||| ||||| || | ||||| |||| | | || Sbjct 197 AAGAGTTCGCGAACGCGCTTGGCACCAACACCGACGTAAATCTCGTCAAATTCAGATCCA 138 Query 11744 GAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTT 11803 || | || |||||| || | ||||| || | ||||| ||||||||||||||| Sbjct 137 GACATGTAGAAGAATGGCACGCCAGCCTCACCGGCCACGGCTCTGGCGAGGAGGGTCTTG 78 Query 11804 CCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 || ||||| ||| || | ||||| |||| ||||| |||||||| Sbjct 77 CCGGTACCGGGCGGGCCAACAAGAAGAACGCCCTTGGGGAGTTTGGCACC 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627961982282400