Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq2922 297 2e-75
seq3690 208 1e-48
seq2974 87.8 2e-12
seq4210 86.0 8e-12
>seq2922
Length=128268
Score = 297 bits (328), Expect = 2e-75
Identities = 910/1391 (65%), Gaps = 46/1391 (3%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| || || | ||| |||||| || |||||||||| |||||| ||||| | |||||
Sbjct 123179 GTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGA 123120
Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823
|| || |||||||||||||| || || | | | || ||| | || | |||| |
Sbjct 123119 TGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCT 123062
Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
|| ||| || ||||| || | || | || || |||||||| ||||||||
Sbjct 123061 TTTCTTAAGGTG-TCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTG 123003
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941
|| | ||||| || || ||||| || | || ||||| || | ||| | |||| |
Sbjct 123002 TAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGA 122945
Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001
|| | |||||| || |||| ||| || ||||| || ||||||||||| | |||
Sbjct 122944 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 122885
Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061
| | |||||| || |||||||||| | || ||| || || || ||||||
Sbjct 122884 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 122825
Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121
||||||||||||||| |||| ||||| |||| |||||| || |||| ||| |||||
Sbjct 122824 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 122765
Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181
|| || |||| | |||||||||| ||||| ||| ||||||| || | ||||||
Sbjct 122764 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 122705
Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCT---------------CTTCATTGACATAC 111226
|| | ||||| | | | ||| ||||| |||| ||| || |
Sbjct 122704 TGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC 122646
Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286
||| | ||| | || ||||| || |||||||| || ||||| | ||| ||| ||
Sbjct 122645 --TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCA 122588
Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346
| |||||| |||||||| || ||| || || || || ||||| ||| ||
Sbjct 122587 ACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTT 122528
Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406
|||| || ||||||||||| | | | | || || || || || || || | || | |
Sbjct 122527 CTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAA 122468
Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466
|| | | ||| | || || | | || | || | || || || ||||||
Sbjct 122467 ATGGAATACCATA-ATTTTTGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAG 122411
Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTC 111525
|| || || || |||||||| ||||| ||| | ||| || || |||
Sbjct 122410 CGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT- 122352
Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585
|||| |||| | | ||| ||| ||| || || |||||||||||||| || |||||
Sbjct 122351 TGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAAT 122292
Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645
||| || | | || | |||||| ||| || || | ||| ||||| || |||
Sbjct 122291 CCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAA 122233
Query 111646 -CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAG 111698
|||| || || | ||||| || |||||||| || || || | || | ||
Sbjct 122232 TATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 122173
Query 111699 ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758
|| ||| | ||| | || | ||||| || || ||| || || || |||| ||
Sbjct 122172 GTCTCTTGTTA---CCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCA 122116
Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818
| ||||| | ||| | || ||| ||||| || ||| ||| | | | | |
Sbjct 122115 TAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAA 122056
Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878
| |||||| || | |||||||| ||||| || || || ||||| ||| | |
Sbjct 122055 TGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCA 121996
Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938
|| | || || || | ||| ||||||||||| |||| | | ||| ||| |||||
Sbjct 121995 AGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACA 121936
Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 111998
| || ||| |||| ||||| |||||||| | ||||| | |||||| | || ||| ||
Sbjct 121935 TTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTT 121877
Query 111999 -GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057
| |||||| || || || || || ||| || || |||| ||||||||||| | |
Sbjct 121876 AGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTTTACCGTGGATGCCTAGT 121817
Query 112058 GCGACCCGCAT 112068
||||| | |||
Sbjct 121816 GCGACTCTCAT 121806
>seq3690
Length=234713
Score = 208 bits (230), Expect = 1e-48
Identities = 890/1385 (64%), Gaps = 40/1385 (3%)
Strand=Plus/Plus
Query 110725 TGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGC 110784
|||||| || || || || | ||| ||||| || | ||||| || || ||||| |||||
Sbjct 182895 TGGTTCGAAACACTCGTTGTAACCTAAGATCTGAGATGTGGATGCAGTAGGCATAGGTGC 182954
Query 110785 CATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAG 110842
||| ||||| ||| | || ||| | |||| ||||| | | ||| |||||
Sbjct 182955 CATGGTCAAAGA--GTTTCTAATACCATGCTCCATGATGTTATTTCTCAGAGTGTCCCAA 183012
Query 110843 TCGTAGTTGAGCT-TGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGC 110901
|| | | | |||||| | |||||||||| || ||||| | ||||| || ||
Sbjct 183013 TCCCACATACCGTATGGTTTTTGGT-CCCACATGTCGAATTGAAGTATACCTTGAGAAGC 183071
Query 110902 GGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 110961
|| || || | ||||||||| || | || | || ||| |||||||| || ||
Sbjct 183072 CGGGGAGCCTTTAAAGGTTTCGTATGGGCCATCTCTTTGAGCTAATTCACAAGAAGCTTC 183131
Query 110962 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA-TCTCCTTGGCTTCATCTG 111020
|| ||| || || || || ||||| ||||| || ||| | | | | ||||| ||||
Sbjct 183132 CATGGAGGCATGGTAGATAGTTTCGAAGATTTGAATATTTAGTAAGCGT-GCTTCTTCTG 183190
Query 111021 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 111080
| || |||| | || |||| || || || || | |||||| ||||||||| |||
Sbjct 183191 AGTCGAATGGCAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAA 183250
Query 111081 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 111140
| || || |||| ||||||||| ||| || ||| || |||||| | || | |||||
Sbjct 183251 TCGGCCTATGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAA 183310
Query 111141 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG-TTTTTCA-----T 111194
| || ||||| || |||| || || | |||||||| || ||||| | |
Sbjct 183311 TAACGTTGTTTAAGTTACGAGTAATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTGT 183370
Query 111195 AATCAAAAGTGCGAGTCTCTTCA----TTGACATACTT--TGGAAGGGCGATTGATGCCA 111248
| | |||| |||||| || ||| | ||| | || | || ||||
Sbjct 183371 ATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCA 183430
Query 111249 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGG 111308
| || |||||||| |||||||| | | | ||| || | |||||| || || || |
Sbjct 183431 AGTTACAAACAGCAGTCTCATCTGGAGCAGAGTATTCAACAATTTCACAGCACAAATTAG 183490
Query 111309 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGA 111368
| ||| || ||||| ||||||||||| ||| |||| || ||||||||||| |
Sbjct 183491 ATGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAA 183550
Query 111369 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCG 111427
| | || || || || ||||| |||| || | |||| | ||| || | | |
Sbjct 183551 CAACAAATGGTGTACCAGTTTCCGTTTGTGCTTCCAAGATAGAGTACCATAATTTTTGGG 183610
Query 111428 GCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487
|| | || | || | || || || ||||| || || |||||||| ||
Sbjct 183611 CCTTG----ATAGTCTTACCACGACCTTCTTTTTCGTAACGGGTATATAGGGCTTCGAAT 183666
Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCATTG 111546
|| ||||| ||| | ||||| || ||| ||| |||| | || |||
Sbjct 183667 TCATCACCGTAACAGTCACTCAAGCCTGGGGCAGATGT-AGGAGAGAATAAAGTCCAAGT 183725
Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 111606
|| ||| || || |||||||||||||| ||||||| ||| || | | || | |||
Sbjct 183726 GCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACCCATAGAGCAGGGAATAAATC 183785
Query 111607 TCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 111665
||| ||| || ||||| | ||| || || || | || | ||| || | |||||
Sbjct 183786 TCTCGCACGGA-TTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATAT 183844
Query 111666 CCGCGTGCCATGGCTC--AAGATAG----ACTGCGATAGATCCCTTTCGACGCCCAGCTT 111719
| |||||||||||||| || |||| | || || || ||| | ||| |||
Sbjct 183845 CAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTA---CCACCTT 183901
Query 111720 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 111779
| | ||||| || || || ||| || || || | ||| ||||| | || | ||
Sbjct 183902 GGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAG 183961
Query 111780 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 111839
|| ||||| || ||| ||| | || | | | ||||| || | ||||
Sbjct 183962 TCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGGATATGTAGACCAA 184021
Query 111840 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 111899
|||| ||||| || || || ||||| ||| | | ||| | || ||||| | |
Sbjct 184022 TACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAAGTATCGTAAATACCTTCAA 184081
Query 111900 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 111959
| || || ||||| | || | | ||| || |||||| || || |||| |||||||
Sbjct 184082 TGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTTGAGGCTTTGGAGTACCAG 184141
Query 111960 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTC 112018
| ||||| | ||||| | || ||| | || || || | ||||| || || ||
Sbjct 184142 CGTTGAATAAAGTTGGAGAGGCATGAGT-AAAGTATTTTAGAGACATTAAGTTATAGGTT 184200
Query 112019 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTAC 112078
|| || | | ||||||| ||| ||||| || || | ||||| | ||||| | || |
Sbjct 184201 TCTAAAGCGGCCTCAATGTTTTCACCGTGAATACCTAGGGCGACTCTCATGATTAAGTGC 184260
Query 112079 TGTGG 112083
|||||
Sbjct 184261 TGTGG 184265
>seq2974
Length=151892
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 11705 GCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGAT-GAATGGGAC 11763
|||||||| ||||||||||| ||||| || | | |||| ||| | | ||| || ||
Sbjct 92343 GCACCCACCCCAACAAACATTTCCACGAACTCGGAACCAGA-CACGGAAAAGAAGGGCAC 92401
Query 11764 ATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGC 11823
|| | || |||||| |||| ||| | ||||||||| || |||||||| || |
Sbjct 92402 GTTGGCCTCGCCCGCGGTGGCCTTGGCCAAGAGGGTCTTACCGGTACCTGGAGGCCCGGA 92461
Query 11824 GAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
|||| ||||||||||||||| ||||| ||
Sbjct 92462 AAGAATGGCGCCTCGGGGGATTTTGGCGCC 92491
>seq4210
Length=586
Score = 86.0 bits (94), Expect = 8e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 11624 CCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCA 11683
|| ||||| |||| ||| |||||||||| || ||| || | ||| ||
Sbjct 257 CCGACCGCGTCAAGCTCGTCAATGAAGATGATGGCGGGTGACTTGGCCTTGGCTGCGGCA 198
Query 11684 AAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCA 11743
||||| |||||||| | |||||||| ||||| || | ||||| |||| | | ||
Sbjct 197 AAGAGTTCGCGAACGCGCTTGGCACCAACACCGACGTAAATCTCGTCAAATTCAGATCCA 138
Query 11744 GAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTT 11803
|| | || |||||| || | ||||| || | ||||| |||||||||||||||
Sbjct 137 GACATGTAGAAGAATGGCACGCCAGCCTCACCGGCCACGGCTCTGGCGAGGAGGGTCTTG 78
Query 11804 CCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
|| ||||| ||| || | ||||| |||| ||||| ||||||||
Sbjct 77 CCGGTACCGGGCGGGCCAACAAGAAGAACGCCCTTGGGGAGTTTGGCACC 28
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627961982282400
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