Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq3690 104 3e-17
seq2922 86.0 7e-12
>seq3690
Length=234713
Score = 104 bits (114), Expect = 3e-17
Identities = 128/175 (73%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247
|||||| |||||| ||||| || ||||| |||||||||||||| ||||| | |||||||
Sbjct 182528 GTGTTCTCAAATAATACATACCGGTCTTTAGACCCTTCTTCCAGCCGTAGAAATGCATAC 182587
Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307
| | ||||| ||| | | ||| || ||| | || | || || || |||||||
Sbjct 182588 TTGTTAGCTTACCCATAGTTGGGGCACGCAAGAATAAATTCAAAGAGTGAGATTGGTCGA 182647
Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362
|||| | |||||||| ||||||| |||| | |||||| | ||| |||||
Sbjct 182648 TGTAAATGGCACGGTCGGCTGCCATGTTAATGATTGTCTTTTGTGAAATTTCCCA 182702
>seq2922
Length=128268
Score = 86.0 bits (94), Expect = 7e-12
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|||| |||||||||||| || ||||| | ||||||||||||||||| | ||||||||
Sbjct 123526 GTTCTCAAATAGTACATACCGGTCTTCAATCCCTTCTTCCATCCGTAAAAATGCATACTT 123467
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309
| || || ||| | | ||| | ||| | || | || || || || || ||
Sbjct 123466 GTTAGTTTACCCATAGTTGGGGCACGTAAGAACAAATTCAAAGAATGAGATTGATCAATA 123407
Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369
|| || || ||||| ||||||| |||| | |||||| | ||| ||||| | |||
Sbjct 123406 TAGACAGAACGATCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTC 123347
Query 78370 CGGTAAATGGCCTTCAGCTCTT 78391
||| | | |||||| ||||
Sbjct 123346 TTGTATAAGTCCTTCAATTCTT 123325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548463646341360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |