Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3582 123 3e-23 seq3690 122 1e-22 seq3379 109 6e-19 >seq3582 Length=113103 Score = 123 bits (136), Expect = 3e-23 Identities = 337/511 (66%), Gaps = 10/511 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTG----AGACG 53248 ||||||| || ||| | ||||| ||||| ||| || || ||||||| |||| Sbjct 81402 TCATGCGTGTGGCCCTAGGTATTCACGGCAGCGA-TAT---CGAGTCCGTGCTGAAGACT 81457 Query 53249 TACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGT 53308 ||| |||| ||| | ||||| || ||||| | || || || || || || ||| Sbjct 81458 TACAACTTGATGTCGTTGAGATACTTCACCCACGCTTCCCCCACACTATTTAATGCCGGT 81517 Query 53309 ACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368 ||| || ||||| ||||| || |||||| | || |||||||| ||||| || || Sbjct 81518 ACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATTGAA 81577 Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428 || || ||||| || | || ||||||||| || |||||| | |||||| | ||| Sbjct 81578 GGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGT 81637 Query 53429 ATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488 | || | || | ||| | | ||| | || || || ||||| | Sbjct 81638 CTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCA 81697 Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548 | || | | || ||| |||| |||||||||||||| || || ||||| |||| ||| Sbjct 81698 AACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACTGCACGTTACGTGGACCAAGGT 81757 Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608 ||| ||| | || | || ||| | | | | ||||| ||||| || ||||| | Sbjct 81758 GGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTC 81817 Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT 53667 || ||| |||| | | || ||| ||| | ||||| || || ||| | || |||| Sbjct 81818 GACTTTGTCGATATCAGAAAGACTCATGGTAAGGAAGAAATTCG-TGCAAGAGATTTGTT 81876 Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 | ||||| |||||||| || || |||||| Sbjct 81877 CCCTGCTCTATGGATTCCCGATCTTTTCATG 81907 >seq3690 Length=234713 Score = 122 bits (134), Expect = 1e-22 Identities = 335/508 (66%), Gaps = 4/508 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||| | |||||| | ||||| |||||||| || | | || | || || || Sbjct 184252 TCATGAGAGTCGCCCTAGGTATTCACGGTGAAAACATTGAGGCCGCTTTA-GAAACCTAT 184194 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 |||||||| | ||| |||||||| || ||| | ||||| | |||||||||||||| Sbjct 184193 AACTTAATGTCTCTAAAATACTTTACTCATGCCTCTCCAACTTTATTCAACGCTGGTACT 184134 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | ||||| ||||| ||| ||| | || || ||||||||||| || || || || Sbjct 184133 CCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGATGATTCCATTGAAGGT 184074 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 || ||||| || | ||||| ||||| || || || | || ||||| ||| | Sbjct 184073 ATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCTGGAGGTATTGGTCTA 184014 Query 53432 CACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491 || | ||| | ||||| | |||| | || || || ||||| | | Sbjct 184013 CATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACAAACGGGACTTCTAAC 183954 Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || | | |||||| |||| ||||||||||| || ||||| || || |||| |||||| Sbjct 183953 GGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTATGTTGACCAAGGTGGT 183894 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 ||| | || | || || | || | ||||| |||||||| || || | || Sbjct 183893 AACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTTCGAC 183834 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTAC 53670 || |||| | | |||||| ||| | ||||| || || ||| | || | || | Sbjct 183833 TTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TGCGAGAGATTTATTCCC 183775 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATG 53698 ||||| ||| |||| || || |||||| Sbjct 183774 TGCTCTATGGGTTCCAGATCTTTTCATG 183747 >seq3379 Length=20444 Score = 109 bits (120), Expect = 6e-19 Identities = 346/530 (65%), Gaps = 20/530 (4%) Strand=Plus/Plus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || ||| | ||||| ||||||| ||||| || || || || | | || Sbjct 703 GGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAACCC 762 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| | || | |||||||||||| ||||||| |||||| || |||||| | Sbjct 763 GGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAAAC 822 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----A 74925 ||||||| |||| |||||||| || | || ||||| | || || | ||| | Sbjct 823 ACCTTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTG-CGTCTTGGA 881 Query 74926 TCCAAGTCTGAGCCCATTCAG-CTTTTCG----TTTGACCGCAGGGACAGTATCGATCGC 74980 |||| | | |||||||| | ||| ||| ||| | |||| || ||||| || Sbjct 882 TCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTT-----CTGGGATGGTGTCGATGGC 936 Query 74981 TTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTA 75040 | ||| | | | | | || | |||||||||| | | || |||| | ||||| Sbjct 937 GTTGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTA 996 Query 75041 CGTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTG 75099 || || |||||||| ||| | | ||| ||| | |||||||| | || || | Sbjct 997 GGTTTCGGAATGAATGTTTTCGAT-AGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCG 1055 Query 75100 CAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGG 75159 ||||| || || | || |||||| | | | || || |||| || ||||| |||| Sbjct 1056 GGATCTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTCGGAGG 1115 Query 75160 CGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT---TTGT 75216 ||||||| || || || || || ||| ||| | || | || | | | |||| Sbjct 1116 CGGCGAAGAAGGCAAGGACTCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTCTGTTGT 1175 Query 75217 CCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAA 75266 ||| || | | ||| | |||||| || |||||| | ||||||||| Sbjct 1176 TCCAGTCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAA 1225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547154992256200