Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq2811 116 2e-21
seq8071 107 1e-18
seq4029 105 4e-18
seq4535 100 2e-16
seq6248 91.5 9e-14
seq3354 82.4 5e-11
>seq2811
Length=58406
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||||||||| || ||||| ||||| |||||||| ||||| ||
Sbjct 27197 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 27256
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| ||||| ||||||||||| || || | ||||| || || ||
Sbjct 27257 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 27316
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||| |||| ||| | ||| ||||| || ||
Sbjct 27317 ATACCTTCCTTGTCT-TGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 27375
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | |||||| || || || |||| ||||| || ||||| |||||
Sbjct 27376 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27423
Score = 109 bits (120), Expect = 3e-19
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|||||| | || ||||| |||||| |||||||||||||| || || |||| ||||
Sbjct 26983 CAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 27042
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
||| ||||| ||||||||||| || || | ||||| || || || | || ||||||||
Sbjct 27043 TTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 27102
Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672
| ||| ||| | || ||| | ||| ||||| || || || | |||||| |
Sbjct 27103 T-TGAATTTTCGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAG 27161
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || |||| ||||| || ||||| |||||
Sbjct 27162 TCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27195
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||||||||| || ||||| |||||||| ||||| || || ||
Sbjct 27425 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 27484
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| ||||||| || || ||||||||||| || || | ||||| || || ||
Sbjct 27485 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 27544
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||| | |||||| | || ||||| || ||
Sbjct 27545 ATACCTTCCTTGTCT-TGAATTTTCGACTTAACGTTGTCGATGGTGTCGGAAGATTCAAC 27603
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||||| ||||||||||| || || || || |||||||||||
Sbjct 27604 CTCTAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27651
>seq8071
Length=459
Score = 107 bits (118), Expect = 1e-18
Identities = 165/233 (71%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | ||||| ||||| || |||||| || ||||| || || |||
Sbjct 208 CCACCACGAAGACGGAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAA 267
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || ||||| || || |||||||| || | |||||| ||||| || ||
Sbjct 268 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGA 327
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || ||| | || ||||| ||| ||
Sbjct 328 ATGCCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAAC 386
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
|| | ||| || || || ||||| || || || || ||||| ||||||||||
Sbjct 387 CTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATTTGCATGTTGA 439
>seq4029
Length=108955
Score = 105 bits (116), Expect = 4e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || | |||| ||||||||| ||||| || || ||
Sbjct 14295 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 14236
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| ||||||| | ||| ||||| ||||| || || | |||||||| || ||
Sbjct 14235 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 14176
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||||| | || || | ||| |||||| || ||
Sbjct 14175 ATACCTTCCTTGTCTTGAATCTTA-GACTTGACATTGTCAATAGTGTCTGAAGATTCAAC 14117
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||| | ||| || || ||||||||||| || || || ||||| ||||| |||
Sbjct 14116 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 14065
>seq4535
Length=12927
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || ||||| |||||||| ||||| || || ||
Sbjct 8316 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8257
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | ||| ||||| ||||| || || | |||||||| || ||
Sbjct 8256 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8197
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| |||||| | || || | ||| ||||| || ||
Sbjct 8196 ATACCTTCCTTGTCTTGGATCTTG-GACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8138
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||||| ||| || || ||||||||||| || || || ||||| ||||| |||
Sbjct 8137 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 8086
>seq6248
Length=918
Score = 91.5 bits (100), Expect = 9e-14
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||| || ||||| || |||||| |||||||| || || || || || ||
Sbjct 576 AGACGGAGCACAAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGG 517
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || |||||||| || || ||||| || | |||||||||||| || || | ||||||
Sbjct 516 CCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGTTGGTCTGGAGGAATGCCCTCC 457
Query 34609 TTGTC 34613
|||||
Sbjct 456 TTGTC 452
Score = 91.5 bits (100), Expect = 9e-14
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | ||||||| |||||| || | || |||||| || ||||| || || ||
Sbjct 814 GCCGCCACGCAGACGCAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCAGA 755
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | || || || || || || ||||| || | |||||||||||| || ||
Sbjct 754 GAGAGTACGCCCATCCTCCAGCTGCTTTCCTGCAAAGATAAGACGCTGTTGGTCTGGTGG 695
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| ||| || || || ||| | || |||||| ||||
Sbjct 694 GATACCCTCCTTGTC-CTGAATCTTGGTCTTCACGTTGTCGATAGTGTCTGAAGATTCCA 636
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | || ||||| || || || || || || || || || |||||
Sbjct 635 CCTCGAGTGTAATCGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 587
Score = 89.7 bits (98), Expect = 3e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||||||| |||||| || ||||| || || || || || || | || || |||||
Sbjct 333 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCCTCGAGTTGC 274
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| ||||| || || || ||||||||||| || || | ||||||||||| |||| ||
Sbjct 273 TTGCCGGCGAAGATCAAGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATC-TT 215
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
|| || || | || ||||| ||| || || | || || || || |||||
Sbjct 214 GGTCTTGACATTGTCGATGGTGTCAGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 155
Query 34683 TAACGTTTTCACAAAAATCTGCATGTTGATTGT 34715
| || || || || ||||||||| ||| |||
Sbjct 154 GAGGGTCTTGACGAAGATCTGCATGATGACTGT 122
>seq3354
Length=695
Score = 82.4 bits (90), Expect = 5e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|||||||| |||||| || ||||| || || ||||| || || |||| || || ||
Sbjct 264 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGC 323
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| ||||| || || | ||||| ||||| || || | ||||||||||| ||| ||
Sbjct 324 TTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC-CTGAATCTT 382
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || || | || ||||| | |||||| || | ||| || || ||||| ||
Sbjct 383 GGCCTTGACATTGTTGATGGTGTCCGAGGACTCCACCTCGAGGGTAATGGTCTTACCCGT 442
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| || || || |||||||||||
Sbjct 443 CAGAGTCTTGACGAAAATCTGCAT 466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314695388794127
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