Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_028663.1
Length=188632
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 533 2e-146
seq7678 307 1e-78
seq5149 143 3e-29
>seq8857
Length=8770
Score = 533 bits (590), Expect = 2e-146
Identities = 691/952 (73%), Gaps = 2/952 (0%)
Strand=Plus/Minus
Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205
||||| |||| ||||||||||| | ||||| || | | || || | | |||
Sbjct 6396 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTA 6338
Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265
|||||| | || || ||||| || || || || ||||| || |||||||| ||||| ||
Sbjct 6337 TTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTT 6278
Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325
| |||||| | || || |||||||| || ||||| || || | | || | ||
Sbjct 6277 TCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCG 6218
Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385
|| ||||| | ||||| || ||||| |||||||| ||| | ||||| |||||| | |||
Sbjct 6217 GCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATAC 6158
Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445
||||| || || || | || |||| | |||||| | | ||| | | |||||||
Sbjct 6157 AATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATG 6098
Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505
|| || | |||||||| |||| | | || || ||||| |||||||| |||||| ||
Sbjct 6097 GGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTAT 6038
Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565
|| || || || | || || | || |||||| | | || ||| | |||||||||
Sbjct 6037 TCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGC 5978
Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625
|| ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||||
Sbjct 5977 TTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAG 5918
Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685
|| || |||||||| || ||||||||||| || ||| | || ||||| ||||| ||||||
Sbjct 5917 GCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGT 5858
Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACA 176745
|| || || || || ||||| || | || |||||| | | || || ||
Sbjct 5857 GGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACT 5798
Query 176746 ACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAAC 176805
|| ||||| ||||| || | |||||||||||||| ||||| ||||| || || ||
Sbjct 5797 ACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAAT 5738
Query 176806 ATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAAC 176865
||||||||||| || ||||| ||||| || | |||||||| ||||| |||||| |||
Sbjct 5737 ATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAAC 5678
Query 176866 TCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCA 176925
|| | | | || |||||| | || || | || ||| | | || |||||||||||
Sbjct 5677 TCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCT 5618
Query 176926 ATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTA 176985
| ||| || | || ||||| ||||| | || |||||||| ||||| || ||||| |
Sbjct 5617 TTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTT 5558
Query 176986 GACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGT 177045
|| | ||| || ||| ||| || | |||||| ||||||| || |||||||||
Sbjct 5557 GATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGT 5498
Query 177046 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTG 177097
|||||||||||||| || ||||||||||| |||||||| || ||||| ||||
Sbjct 5497 ATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTG 5446
>seq7678
Length=557
Score = 307 bits (340), Expect = 1e-78
Identities = 327/425 (77%), Gaps = 10/425 (2%)
Strand=Plus/Minus
Query 176719 GTTACTTCTTCACTTGTTA-GAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAA 176777
|||||||| || |||| || | || || || |||| ||||||||||||||||||||||||
Sbjct 539 GTTACTTCCTC-CTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTACAA 481
Query 176778 ATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCT 176837
||||||||||||||||| || |||||||| |||||||||||||||||||||||||| |
Sbjct 480 GTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGGTT 421
Query 176838 TATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGT---CTTCACTTCTTCCTTGCAGC 176894
|||||||| || ||||| ||||| ||| || || || ||||||||| | || ||
Sbjct 420 GATCTTCCAATACGCTTCCTTCAACAAC---AGCCGTTCACTGCACTTCTTCTTGGCTGC 364
Query 176895 ATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCT 176954
|| ||||| | | ||||||||||| || | ||| | |||||||||| ||||||||
Sbjct 363 ATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCT 304
Query 176955 TAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTC-TGGTAAAGTGATTCCTACAT 177013
||||| |||||||||||||| || || | || ||| ||| || || |||| |
Sbjct 303 GAACGGATTCAACTTCAACCAATCAGTAATCGA-TTCTCAAGGTCGCGTCATCGCTACTT 245
Query 177014 GGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTC 177073
||| || | | ||||| || ||| | ||||||||||| |||||||||||||| ||||
Sbjct 244 GGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTC 185
Query 177074 ACAACTTCCCACTTGACCTTGCTGCTGCAGAGACAACTCAGGTTGCTCTTACTGCACCAT 177133
|||||||||| | ||| | ||||||| || ||| || ||| | ||||||||
Sbjct 184 ACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCTG 125
Query 177134 CAATC 177138
|||||
Sbjct 124 CAATC 120
>seq5149
Length=487
Score = 143 bits (158), Expect = 3e-29
Identities = 250/361 (69%), Gaps = 2/361 (1%)
Strand=Plus/Plus
Query 19347 CGTGGTCGTATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTA 19406
|||||| || |||| | ||||| | || || |||| |||||| || |||| || |
Sbjct 10 CGTGGTATAATTCACTTTAAGTTTTATAAATGGATCGTCTGTGAAGTTTGTGCGAGGTTT 69
Query 19407 TGCCCTATCAATCTACCAGTGGTGGATTGGGTGATGAACAAA-CAGACAAAGAAGAAAGA 19465
|| | || | ||||| || | |||| || | | ||| | ||||| |||| | |
Sbjct 70 TGTCTCATTTACCTACCTGTACTAGATTTGGAACTTGATAAAGCTAACAAA-AAGACACA 128
Query 19466 ACTTAGAAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTA 19525
|| | | || ||| |||||| | |||||| ||||||||||||| || || ||
Sbjct 129 GCTCAAGCACTACATGATTTTCTTTGGCGTTTGTATTATCTGCGGTAACTGTGTGGAATA 188
Query 19526 TTGCCCAACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGACAGACA 19585
|||||| || |||||| |||| ||||||||||||||||| | | | | || | ||
Sbjct 189 TTGCCCGACTAACTGTTTATCGATGACAGAAGAATATGAGCTATCCGCCTAAGATCGCCA 248
Query 19586 TCAACTTAACTTTGATAACGTCGCTCTTGGACGATTGCCCACTAATGTTACAACTGATCC 19645
| || | |||| |||||||| || ||||| || |||| || ||||||| ||| ||
Sbjct 249 TGAATTGAACTACGATAACGTAGCACTTGGTCGTCTGCCTTACAAAGTTACAAATGACCC 308
Query 19646 CTCAGTTAGACCGTTGCGTGAGCTTACTTATTTACCCAAAGGTGAGATGGATCCTCACAA 19705
|| | ||| ||||| || || ||| |||||||| |||| |||||||| ||| |
Sbjct 309 AATGGTGACACCATTGCGCGAACTAGTTTACTTACCCAAGGGTGTCATGGATCCCCACGA 368
Query 19706 T 19706
|
Sbjct 369 T 369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603427117918080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |