Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_028696.2
Length=41338
Score E
Sequences producing significant alignments: (Bits) Value
seq3651 459 7e-125
>seq3651
Length=7586
Score = 459 bits (508), Expect = 7e-125
Identities = 876/1272 (69%), Gaps = 45/1272 (4%)
Strand=Plus/Plus
Query 16752 TTGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCG 16811
||| |||||||||| || ||||||||| | ||||| | | |||| | || |
Sbjct 3658 TTGTAGTGGTCAACTAATACTGGCCACAGCATTAGACTGTAAGT-AGTACAGCCGCTCAG 3716
Query 16812 ATTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAA 16871
||||||| || | | | || ||||| ||| || || | ||||||||||||||
Sbjct 3717 ATTCGTTGGGCGTCAGACTGCCGTTATACCAGTGGGGCCTGATAGCGCTGTAATATCCCG 3776
Query 16872 CGATATAGTCCGTTATTGCG---TGAGCTGCATCGCTGAAGCTTACATAGCCCGTCGCCG 16928
|||||| |||| ||| || ||| ||||||||||| ||||||| ||| ||
Sbjct 3777 TTATATAGCGGATTATCGCGCCCTGGGCT---TCGCTGAAGCTGTTATAGCCCTTCGTCG 3833
Query 16929 GCACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAGT 16988
||||||||||| ||||||| |||| |||||| |||||||| ||| ||||||||||||||
Sbjct 3834 GCACCCATTCGGTCTTCAGGCTCCGGAAGAACCGCTCCATAGGGGCGTTATCCCAGCAGT 3893
Query 16989 TTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAACTGCCGGAACTGCC 17048
|||| || ||||||||||||||| | |||| | | |||||| |||||| | |
Sbjct 3894 TTCCCCGTCGACTCATACTCTGCTTTATCCTACAGCGCCACAGCGCCTGCCGATATCTAC 3953
Query 17049 TGCTCGTATAATGACTGCCTTGATCGCTGTGGAACATCACCCCGACGGGCTTACCACGGG 17108
||| ||||| | ||||| || |||||||||||| ||| | |||||||| ||
Sbjct 3954 GGCTGGTATAGGGGCTGCCCTGGTCGCTGTGGAACGCCACGTCTGTTGGCTTACCCCGAA 4013
Query 17109 TTTCCCATGCCATTTCCAGTGCTTTCATGGTAAGCCTGC--TGTCCGGCGAGAACGACAT 17166
||||| ||||| | || ||||| | || || ||| |||||| || ||||||
Sbjct 4014 GCTCCCAGGCCATCTGCAACGCTTTGACCGTCAG--TGCCGAGTCCGGTGACGTCGACAT 4071
Query 17167 GGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCG 17226
|||||||||||| ||||| | ||| |||| ||| || || || || || || |||||||
Sbjct 4072 GGCCCAGCCCACCGGTTTACGTGCAAACAAGTCCAGCACCACCGCCAGATAAGCCCAGCA 4131
Query 17227 CTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCACGGC 17286
||||||||||||||||| |||||||| |||||||| ||||| | ||| |||| || ||
Sbjct 4132 TTTACCCGTCCAGATATAAGTCACATCGCCGCACCAGACCTGGTCCGGCCCGGTAACCGC 4191
Query 17287 GAACTGCCGTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCACGTTTATACCG 17346
|||||| || || || | ||| || || |||| ||||| | || || ||||| ||
Sbjct 4192 GAACTGGCGGTCGAGATGGTTCGGTATCTCAACGTGTTCGTTTCCGCCGCGTTTGTATTT 4251
Query 17347 GTAAGTCGGCT-GCTGACAGCTGACCAGCCCCAGCTCTTTCATGAGTCTGCCAGCAAGCC 17405
|| | | ||| ||| || ||| | | |||||||||||| || | || ||||
Sbjct 4252 GTGCG-CTGCTATCTGGCAACTGGCGATATTCAGCTCTTTCATCAGCTTACC----AGCC 4306
Query 17406 AGCGCCCCATCTGGTAGCC----TCTCTGGGTTGCCATTGTGGCGATGCTTCTTGCTCCG 17461
|||| ||||| | | ||| || || | | | || | ||||| |||| || |||
Sbjct 4307 AGCGGCCCATTTTGACGCCAGAGTCCCT-GCTGACGATGGCAGCGATACTTCGGGCGCCG 4365
Query 17462 GCAGAGCCGTGGCTG--ATGCCATGCAGTTCAAGTACCTGGCTGCGTAATACAGCCCGTC 17519
||||||||| |||| | ||| || || | |||| ||| || || | |||
Sbjct 4366 GCAGAGCCGCCGCTGGCGTTCCAGGC--CTCCATGACCTTGCTACGCTTGACCACACGTT 4423
Query 17520 TGCCGTCTGGCT--TT---TCAGGACGGTTTTTCCAGTATTTGTAGCTGCTGCGATGGAC 17574
|||||| |||| || | | | ||| ||||| |||||||||||||||||||
Sbjct 4424 CGCCGTCAGGCTCATTCGCTGAAGCCGG-----CCAGTGCCTGTAGCTGCTGCGATGGAC 4478
Query 17575 CCCGAACACATGGCAGAGAGTGGCCACAGGATAACGCGCCCTGAGTTTCCCGATTATCGA 17634
| || ||||| | | || || ||||| | ||| || || | ||| || ||
Sbjct 4479 GTCAAAAGTCTGGCACAACGCAGCGACCGGATACCTCGCTCTTAGCCTGTCGACTACCGT 4538
Query 17635 GAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTTTCC 17694
|||| ||| || | ||| ||||| |||||||| ||||||||||||| ||||| || |||
Sbjct 4539 GAACCGTTGAGTGCGTCCGACATTAAGAGCGCCGTAGCCTTTTTTAGGATTTCGTTCTCC 4598
Query 17695 ATTTCAATACGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTGTTCCGGGGTAATG 17754
||||||| ||||||| || ||||| |||||| | || | ||||| || || |
Sbjct 4599 ATTTCAAGGCGTTGTATTTTCTTCCTCGCCTCACGCAGCTCGAGCTGTTCTGGCGTCA-- 4656
Query 17755 GGGGAGG--CTTTTGGTGTTTTGCCCTGCCGCTCATCACGTAATTGTTTCACCCATCGCG 17812
| ||||| | || ||||| ||||| |||||| || | | |||||||| || |
Sbjct 4657 GAGGAGGCCCGGCGGGCGTTTTCCCCTGGCGCTCAAGTCGCAGCTTATTCACCCAACGGG 4716
Query 17813 TCATTGTGGAAAGGCCGACATCCATAGCGCTGGCTGCATCTGCCACGGTGTAATTCTGGT 17872
|| | ||| ||| || | | || || || | | ||| || ||||
Sbjct 4717 GGATAGCCGAATGGCTTACGTTAACTGCCTCTGCGGCCTTAACGTAGGTATAGCCGTGGT 4776
Query 17873 CAACGACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTGAAATTTCtttttttCATTA 17932
| || || | | || | ||| | ||||| || | || ||| ||| ||||
Sbjct 4777 CGACAACTAACTTCGCCGCTTCAAGCTTAAATTCCGGCGTGGAAT---GTTTAGCCATTG 4833
Query 17933 TGGCACCTGTGTTGTTCTG-AGGTGAGCATATCACC-TCTGTTCAGGTGGCCAAATTCAG 17990
| |||||||| |||| | ||||||| |||||||| || | ||||||| ||| ||||
Sbjct 4834 GGTCACCTGTGGTGTTGGGAAGGTGAGAATATCACCTTCCGATCAGGTGACCAGTATCAG 4893
Query 17991 TAAACCACTTCA 18002
| |||||| ||
Sbjct 4894 TGTACCACTACA 4905
Score = 459 bits (508), Expect = 7e-125
Identities = 876/1272 (69%), Gaps = 45/1272 (4%)
Strand=Plus/Plus
Query 39378 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCGA 39437
|| |||||||||| || ||||||||| | ||||| | | |||| | || ||
Sbjct 3659 TGTAGTGGTCAACTAATACTGGCCACAGCATTAGACTGTAAGT-AGTACAGCCGCTCAGA 3717
Query 39438 TTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAAC 39497
|||||| || | | | || ||||| ||| || || | ||||||||||||||
Sbjct 3718 TTCGTTGGGCGTCAGACTGCCGTTATACCAGTGGGGCCTGATAGCGCTGTAATATCCCGT 3777
Query 39498 GATATAGTCCGTTATTGCG---TGAGCTGCATCGCTGAAGCTTACATAGCCCGTCGCCGG 39554
|||||| |||| ||| || ||| ||||||||||| ||||||| ||| |||
Sbjct 3778 TATATAGCGGATTATCGCGCCCTGGGCT---TCGCTGAAGCTGTTATAGCCCTTCGTCGG 3834
Query 39555 CACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAGTT 39614
|||||||||| ||||||| |||| |||||| |||||||| ||| |||||||||||||||
Sbjct 3835 CACCCATTCGGTCTTCAGGCTCCGGAAGAACCGCTCCATAGGGGCGTTATCCCAGCAGTT 3894
Query 39615 TCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAACTGCCGGAACTGCCT 39674
||| || ||||||||||||||| | |||| | | |||||| |||||| | |
Sbjct 3895 TCCCCGTCGACTCATACTCTGCTTTATCCTACAGCGCCACAGCGCCTGCCGATATCTACG 3954
Query 39675 GCTCGTATAATGACTGCCTTGATCGCTGTGGAACATCACCCCGACGGGCTTACCACGGGT 39734
||| ||||| | ||||| || |||||||||||| ||| | |||||||| ||
Sbjct 3955 GCTGGTATAGGGGCTGCCCTGGTCGCTGTGGAACGCCACGTCTGTTGGCTTACCCCGAAG 4014
Query 39735 TTCCCATGCCATTTCCAGTGCTTTCATGGTAAGCCTGC--TGTCCGGCGAGAACGACATG 39792
||||| ||||| | || ||||| | || || ||| |||||| || |||||||
Sbjct 4015 CTCCCAGGCCATCTGCAACGCTTTGACCGTCAG--TGCCGAGTCCGGTGACGTCGACATG 4072
Query 39793 GCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGC 39852
||||||||||| ||||| | ||| |||| ||| || || || || || || |||||||
Sbjct 4073 GCCCAGCCCACCGGTTTACGTGCAAACAAGTCCAGCACCACCGCCAGATAAGCCCAGCAT 4132
Query 39853 TTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCACGGCG 39912
||||||||||||||||| |||||||| |||||||| ||||| | ||| |||| || |||
Sbjct 4133 TTACCCGTCCAGATATAAGTCACATCGCCGCACCAGACCTGGTCCGGCCCGGTAACCGCG 4192
Query 39913 AACTGCCGTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCACGTTTATACCGG 39972
||||| || || || | ||| || || |||| ||||| | || || ||||| || |
Sbjct 4193 AACTGGCGGTCGAGATGGTTCGGTATCTCAACGTGTTCGTTTCCGCCGCGTTTGTATTTG 4252
Query 39973 TAAGTCGGCT-GCTGACAGCTGACCAGCCCCAGCTCTTTCATGAGTCTGCCAGCAAGCCA 40031
| | | ||| ||| || ||| | | |||||||||||| || | || |||||
Sbjct 4253 TGCG-CTGCTATCTGGCAACTGGCGATATTCAGCTCTTTCATCAGCTTACC----AGCCA 4307
Query 40032 GCGCCCCATCTGGTAGCC----TCTCTGGGTTGCCATTGTGGCGATGCTTCTTGCTCCGG 40087
||| ||||| | | ||| || || | | | || | ||||| |||| || ||||
Sbjct 4308 GCGGCCCATTTTGACGCCAGAGTCCCT-GCTGACGATGGCAGCGATACTTCGGGCGCCGG 4366
Query 40088 CAGAGCCGTGGCTG--ATGCCATGCAGTTCAAGTACCTGGCTGCGTAATACAGCCCGTCT 40145
|||||||| |||| | ||| || || | |||| ||| || || | |||
Sbjct 4367 CAGAGCCGCCGCTGGCGTTCCAGGC--CTCCATGACCTTGCTACGCTTGACCACACGTTC 4424
Query 40146 GCCGTCTGGCT--TT---TCAGGACGGTTTTTCCAGTATTTGTAGCTGCTGCGATGGACC 40200
|||||| |||| || | | | ||| ||||| |||||||||||||||||||
Sbjct 4425 GCCGTCAGGCTCATTCGCTGAAGCCGG-----CCAGTGCCTGTAGCTGCTGCGATGGACG 4479
Query 40201 CCGAACACATGGCAGAGAGTGGCCACAGGATAACGCGCCCTGAGTTTCCCGATTATCGAG 40260
| || ||||| | | || || ||||| | ||| || || | ||| || || |
Sbjct 4480 TCAAAAGTCTGGCACAACGCAGCGACCGGATACCTCGCTCTTAGCCTGTCGACTACCGTG 4539
Query 40261 AACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTTTCCA 40320
||| ||| || | ||| ||||| |||||||| ||||||||||||| ||||| || ||||
Sbjct 4540 AACCGTTGAGTGCGTCCGACATTAAGAGCGCCGTAGCCTTTTTTAGGATTTCGTTCTCCA 4599
Query 40321 TTTCAATACGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTGTTCCGGGGTAATGG 40380
|||||| ||||||| || ||||| |||||| | || | ||||| || || | |
Sbjct 4600 TTTCAAGGCGTTGTATTTTCTTCCTCGCCTCACGCAGCTCGAGCTGTTCTGGCGTCA--G 4657
Query 40381 GGGAGG--CTTTTGGTGTTTTGCCCTGCCGCTCATCACGTAATTGTTTCACCCATCGCGT 40438
||||| | || ||||| ||||| |||||| || | | |||||||| || |
Sbjct 4658 AGGAGGCCCGGCGGGCGTTTTCCCCTGGCGCTCAAGTCGCAGCTTATTCACCCAACGGGG 4717
Query 40439 CATTGTGGAAAGGCCGACATCCATAGCGCTGGCTGCATCTGCCACGGTGTAATTCTGGTC 40498
|| | ||| ||| || | | || || || | | ||| || |||||
Sbjct 4718 GATAGCCGAATGGCTTACGTTAACTGCCTCTGCGGCCTTAACGTAGGTATAGCCGTGGTC 4777
Query 40499 AACGACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTGAAATTTCtttttttCATTAT 40558
|| || | | || | ||| | ||||| || | || ||| ||| ||||
Sbjct 4778 GACAACTAACTTCGCCGCTTCAAGCTTAAATTCCGGCGTGGAAT---GTTTAGCCATTGG 4834
Query 40559 GGCACCTGTGTTGTTCTG-AGGTGAGCATATCACC-TCTGTTCAGGTGGCCAAATTCAGT 40616
| |||||||| |||| | ||||||| |||||||| || | ||||||| ||| |||||
Sbjct 4835 GTCACCTGTGGTGTTGGGAAGGTGAGAATATCACCTTCCGATCAGGTGACCAGTATCAGT 4894
Query 40617 AAACCACTTCAC 40628
|||||| |||
Sbjct 4895 GTACCACTACAC 4906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132146002521400
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