Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq3651 459 7e-125 >seq3651 Length=7586 Score = 459 bits (508), Expect = 7e-125 Identities = 876/1272 (69%), Gaps = 45/1272 (4%) Strand=Plus/Plus Query 16752 TTGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCG 16811 ||| |||||||||| || ||||||||| | ||||| | | |||| | || | Sbjct 3658 TTGTAGTGGTCAACTAATACTGGCCACAGCATTAGACTGTAAGT-AGTACAGCCGCTCAG 3716 Query 16812 ATTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAA 16871 ||||||| || | | | || ||||| ||| || || | |||||||||||||| Sbjct 3717 ATTCGTTGGGCGTCAGACTGCCGTTATACCAGTGGGGCCTGATAGCGCTGTAATATCCCG 3776 Query 16872 CGATATAGTCCGTTATTGCG---TGAGCTGCATCGCTGAAGCTTACATAGCCCGTCGCCG 16928 |||||| |||| ||| || ||| ||||||||||| ||||||| ||| || Sbjct 3777 TTATATAGCGGATTATCGCGCCCTGGGCT---TCGCTGAAGCTGTTATAGCCCTTCGTCG 3833 Query 16929 GCACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAGT 16988 ||||||||||| ||||||| |||| |||||| |||||||| ||| |||||||||||||| Sbjct 3834 GCACCCATTCGGTCTTCAGGCTCCGGAAGAACCGCTCCATAGGGGCGTTATCCCAGCAGT 3893 Query 16989 TTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAACTGCCGGAACTGCC 17048 |||| || ||||||||||||||| | |||| | | |||||| |||||| | | Sbjct 3894 TTCCCCGTCGACTCATACTCTGCTTTATCCTACAGCGCCACAGCGCCTGCCGATATCTAC 3953 Query 17049 TGCTCGTATAATGACTGCCTTGATCGCTGTGGAACATCACCCCGACGGGCTTACCACGGG 17108 ||| ||||| | ||||| || |||||||||||| ||| | |||||||| || Sbjct 3954 GGCTGGTATAGGGGCTGCCCTGGTCGCTGTGGAACGCCACGTCTGTTGGCTTACCCCGAA 4013 Query 17109 TTTCCCATGCCATTTCCAGTGCTTTCATGGTAAGCCTGC--TGTCCGGCGAGAACGACAT 17166 ||||| ||||| | || ||||| | || || ||| |||||| || |||||| Sbjct 4014 GCTCCCAGGCCATCTGCAACGCTTTGACCGTCAG--TGCCGAGTCCGGTGACGTCGACAT 4071 Query 17167 GGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCG 17226 |||||||||||| ||||| | ||| |||| ||| || || || || || || ||||||| Sbjct 4072 GGCCCAGCCCACCGGTTTACGTGCAAACAAGTCCAGCACCACCGCCAGATAAGCCCAGCA 4131 Query 17227 CTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCACGGC 17286 ||||||||||||||||| |||||||| |||||||| ||||| | ||| |||| || || Sbjct 4132 TTTACCCGTCCAGATATAAGTCACATCGCCGCACCAGACCTGGTCCGGCCCGGTAACCGC 4191 Query 17287 GAACTGCCGTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCACGTTTATACCG 17346 |||||| || || || | ||| || || |||| ||||| | || || ||||| || Sbjct 4192 GAACTGGCGGTCGAGATGGTTCGGTATCTCAACGTGTTCGTTTCCGCCGCGTTTGTATTT 4251 Query 17347 GTAAGTCGGCT-GCTGACAGCTGACCAGCCCCAGCTCTTTCATGAGTCTGCCAGCAAGCC 17405 || | | ||| ||| || ||| | | |||||||||||| || | || |||| Sbjct 4252 GTGCG-CTGCTATCTGGCAACTGGCGATATTCAGCTCTTTCATCAGCTTACC----AGCC 4306 Query 17406 AGCGCCCCATCTGGTAGCC----TCTCTGGGTTGCCATTGTGGCGATGCTTCTTGCTCCG 17461 |||| ||||| | | ||| || || | | | || | ||||| |||| || ||| Sbjct 4307 AGCGGCCCATTTTGACGCCAGAGTCCCT-GCTGACGATGGCAGCGATACTTCGGGCGCCG 4365 Query 17462 GCAGAGCCGTGGCTG--ATGCCATGCAGTTCAAGTACCTGGCTGCGTAATACAGCCCGTC 17519 ||||||||| |||| | ||| || || | |||| ||| || || | ||| Sbjct 4366 GCAGAGCCGCCGCTGGCGTTCCAGGC--CTCCATGACCTTGCTACGCTTGACCACACGTT 4423 Query 17520 TGCCGTCTGGCT--TT---TCAGGACGGTTTTTCCAGTATTTGTAGCTGCTGCGATGGAC 17574 |||||| |||| || | | | ||| ||||| ||||||||||||||||||| Sbjct 4424 CGCCGTCAGGCTCATTCGCTGAAGCCGG-----CCAGTGCCTGTAGCTGCTGCGATGGAC 4478 Query 17575 CCCGAACACATGGCAGAGAGTGGCCACAGGATAACGCGCCCTGAGTTTCCCGATTATCGA 17634 | || ||||| | | || || ||||| | ||| || || | ||| || || Sbjct 4479 GTCAAAAGTCTGGCACAACGCAGCGACCGGATACCTCGCTCTTAGCCTGTCGACTACCGT 4538 Query 17635 GAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTTTCC 17694 |||| ||| || | ||| ||||| |||||||| ||||||||||||| ||||| || ||| Sbjct 4539 GAACCGTTGAGTGCGTCCGACATTAAGAGCGCCGTAGCCTTTTTTAGGATTTCGTTCTCC 4598 Query 17695 ATTTCAATACGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTGTTCCGGGGTAATG 17754 ||||||| ||||||| || ||||| |||||| | || | ||||| || || | Sbjct 4599 ATTTCAAGGCGTTGTATTTTCTTCCTCGCCTCACGCAGCTCGAGCTGTTCTGGCGTCA-- 4656 Query 17755 GGGGAGG--CTTTTGGTGTTTTGCCCTGCCGCTCATCACGTAATTGTTTCACCCATCGCG 17812 | ||||| | || ||||| ||||| |||||| || | | |||||||| || | Sbjct 4657 GAGGAGGCCCGGCGGGCGTTTTCCCCTGGCGCTCAAGTCGCAGCTTATTCACCCAACGGG 4716 Query 17813 TCATTGTGGAAAGGCCGACATCCATAGCGCTGGCTGCATCTGCCACGGTGTAATTCTGGT 17872 || | ||| ||| || | | || || || | | ||| || |||| Sbjct 4717 GGATAGCCGAATGGCTTACGTTAACTGCCTCTGCGGCCTTAACGTAGGTATAGCCGTGGT 4776 Query 17873 CAACGACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTGAAATTTCtttttttCATTA 17932 | || || | | || | ||| | ||||| || | || ||| ||| |||| Sbjct 4777 CGACAACTAACTTCGCCGCTTCAAGCTTAAATTCCGGCGTGGAAT---GTTTAGCCATTG 4833 Query 17933 TGGCACCTGTGTTGTTCTG-AGGTGAGCATATCACC-TCTGTTCAGGTGGCCAAATTCAG 17990 | |||||||| |||| | ||||||| |||||||| || | ||||||| ||| |||| Sbjct 4834 GGTCACCTGTGGTGTTGGGAAGGTGAGAATATCACCTTCCGATCAGGTGACCAGTATCAG 4893 Query 17991 TAAACCACTTCA 18002 | |||||| || Sbjct 4894 TGTACCACTACA 4905 Score = 459 bits (508), Expect = 7e-125 Identities = 876/1272 (69%), Gaps = 45/1272 (4%) Strand=Plus/Plus Query 39378 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCGA 39437 || |||||||||| || ||||||||| | ||||| | | |||| | || || Sbjct 3659 TGTAGTGGTCAACTAATACTGGCCACAGCATTAGACTGTAAGT-AGTACAGCCGCTCAGA 3717 Query 39438 TTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAAC 39497 |||||| || | | | || ||||| ||| || || | |||||||||||||| Sbjct 3718 TTCGTTGGGCGTCAGACTGCCGTTATACCAGTGGGGCCTGATAGCGCTGTAATATCCCGT 3777 Query 39498 GATATAGTCCGTTATTGCG---TGAGCTGCATCGCTGAAGCTTACATAGCCCGTCGCCGG 39554 |||||| |||| ||| || ||| ||||||||||| ||||||| ||| ||| Sbjct 3778 TATATAGCGGATTATCGCGCCCTGGGCT---TCGCTGAAGCTGTTATAGCCCTTCGTCGG 3834 Query 39555 CACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAGTT 39614 |||||||||| ||||||| |||| |||||| |||||||| ||| ||||||||||||||| Sbjct 3835 CACCCATTCGGTCTTCAGGCTCCGGAAGAACCGCTCCATAGGGGCGTTATCCCAGCAGTT 3894 Query 39615 TCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAACTGCCGGAACTGCCT 39674 ||| || ||||||||||||||| | |||| | | |||||| |||||| | | Sbjct 3895 TCCCCGTCGACTCATACTCTGCTTTATCCTACAGCGCCACAGCGCCTGCCGATATCTACG 3954 Query 39675 GCTCGTATAATGACTGCCTTGATCGCTGTGGAACATCACCCCGACGGGCTTACCACGGGT 39734 ||| ||||| | ||||| || |||||||||||| ||| | |||||||| || Sbjct 3955 GCTGGTATAGGGGCTGCCCTGGTCGCTGTGGAACGCCACGTCTGTTGGCTTACCCCGAAG 4014 Query 39735 TTCCCATGCCATTTCCAGTGCTTTCATGGTAAGCCTGC--TGTCCGGCGAGAACGACATG 39792 ||||| ||||| | || ||||| | || || ||| |||||| || ||||||| Sbjct 4015 CTCCCAGGCCATCTGCAACGCTTTGACCGTCAG--TGCCGAGTCCGGTGACGTCGACATG 4072 Query 39793 GCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGC 39852 ||||||||||| ||||| | ||| |||| ||| || || || || || || ||||||| Sbjct 4073 GCCCAGCCCACCGGTTTACGTGCAAACAAGTCCAGCACCACCGCCAGATAAGCCCAGCAT 4132 Query 39853 TTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCACGGCG 39912 ||||||||||||||||| |||||||| |||||||| ||||| | ||| |||| || ||| Sbjct 4133 TTACCCGTCCAGATATAAGTCACATCGCCGCACCAGACCTGGTCCGGCCCGGTAACCGCG 4192 Query 39913 AACTGCCGTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCACGTTTATACCGG 39972 ||||| || || || | ||| || || |||| ||||| | || || ||||| || | Sbjct 4193 AACTGGCGGTCGAGATGGTTCGGTATCTCAACGTGTTCGTTTCCGCCGCGTTTGTATTTG 4252 Query 39973 TAAGTCGGCT-GCTGACAGCTGACCAGCCCCAGCTCTTTCATGAGTCTGCCAGCAAGCCA 40031 | | | ||| ||| || ||| | | |||||||||||| || | || ||||| Sbjct 4253 TGCG-CTGCTATCTGGCAACTGGCGATATTCAGCTCTTTCATCAGCTTACC----AGCCA 4307 Query 40032 GCGCCCCATCTGGTAGCC----TCTCTGGGTTGCCATTGTGGCGATGCTTCTTGCTCCGG 40087 ||| ||||| | | ||| || || | | | || | ||||| |||| || |||| Sbjct 4308 GCGGCCCATTTTGACGCCAGAGTCCCT-GCTGACGATGGCAGCGATACTTCGGGCGCCGG 4366 Query 40088 CAGAGCCGTGGCTG--ATGCCATGCAGTTCAAGTACCTGGCTGCGTAATACAGCCCGTCT 40145 |||||||| |||| | ||| || || | |||| ||| || || | ||| Sbjct 4367 CAGAGCCGCCGCTGGCGTTCCAGGC--CTCCATGACCTTGCTACGCTTGACCACACGTTC 4424 Query 40146 GCCGTCTGGCT--TT---TCAGGACGGTTTTTCCAGTATTTGTAGCTGCTGCGATGGACC 40200 |||||| |||| || | | | ||| ||||| ||||||||||||||||||| Sbjct 4425 GCCGTCAGGCTCATTCGCTGAAGCCGG-----CCAGTGCCTGTAGCTGCTGCGATGGACG 4479 Query 40201 CCGAACACATGGCAGAGAGTGGCCACAGGATAACGCGCCCTGAGTTTCCCGATTATCGAG 40260 | || ||||| | | || || ||||| | ||| || || | ||| || || | Sbjct 4480 TCAAAAGTCTGGCACAACGCAGCGACCGGATACCTCGCTCTTAGCCTGTCGACTACCGTG 4539 Query 40261 AACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTTTCCA 40320 ||| ||| || | ||| ||||| |||||||| ||||||||||||| ||||| || |||| Sbjct 4540 AACCGTTGAGTGCGTCCGACATTAAGAGCGCCGTAGCCTTTTTTAGGATTTCGTTCTCCA 4599 Query 40321 TTTCAATACGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTGTTCCGGGGTAATGG 40380 |||||| ||||||| || ||||| |||||| | || | ||||| || || | | Sbjct 4600 TTTCAAGGCGTTGTATTTTCTTCCTCGCCTCACGCAGCTCGAGCTGTTCTGGCGTCA--G 4657 Query 40381 GGGAGG--CTTTTGGTGTTTTGCCCTGCCGCTCATCACGTAATTGTTTCACCCATCGCGT 40438 ||||| | || ||||| ||||| |||||| || | | |||||||| || | Sbjct 4658 AGGAGGCCCGGCGGGCGTTTTCCCCTGGCGCTCAAGTCGCAGCTTATTCACCCAACGGGG 4717 Query 40439 CATTGTGGAAAGGCCGACATCCATAGCGCTGGCTGCATCTGCCACGGTGTAATTCTGGTC 40498 || | ||| ||| || | | || || || | | ||| || ||||| Sbjct 4718 GATAGCCGAATGGCTTACGTTAACTGCCTCTGCGGCCTTAACGTAGGTATAGCCGTGGTC 4777 Query 40499 AACGACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTGAAATTTCtttttttCATTAT 40558 || || | | || | ||| | ||||| || | || ||| ||| |||| Sbjct 4778 GACAACTAACTTCGCCGCTTCAAGCTTAAATTCCGGCGTGGAAT---GTTTAGCCATTGG 4834 Query 40559 GGCACCTGTGTTGTTCTG-AGGTGAGCATATCACC-TCTGTTCAGGTGGCCAAATTCAGT 40616 | |||||||| |||| | ||||||| |||||||| || | ||||||| ||| ||||| Sbjct 4835 GTCACCTGTGGTGTTGGGAAGGTGAGAATATCACCTTCCGATCAGGTGACCAGTATCAGT 4894 Query 40617 AAACCACTTCAC 40628 |||||| ||| Sbjct 4895 GTACCACTACAC 4906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132146002521400