Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq1378 196 1e-45 seq4801 80.6 6e-11 >seq1378 Length=479 Score = 196 bits (216), Expect = 1e-45 Identities = 295/415 (71%), Gaps = 16/415 (4%) Strand=Plus/Minus Query 627 GAGAACTCCGCAACGCCCCGTTGCAGTTTATCCCACTTCGCCTGAGCGGCGCGCATGGCC 686 || ||||| ||||| ||||| ||||| || ||||| || |||| ||||||||||| || Sbjct 469 GAAAACTCAGCAACACCCCGCTGCAGCTTGTCCCATTTGGCCTTTGCGGCGCGCATCGCG 410 Query 687 TGCGCTTTCGTGGCATATACCGTGGTCAGGGCAAAAACATTGTCAGCCTCACCGGCCATA 746 ||||| |||| || ||||||| ||| ||| || || || | |||||| | Sbjct 409 GCGGCTTTGATGGCGTAAACCGTGGGCAGCATAAACACGTTATCTTCGGTGGCGGCCAGA 350 Query 747 TATTCACCTTCGCGCGCTTCCGGTACTTTTGGCTCTTTCTTCTGCCTGACCGGTTTCGCT 806 || || || ||||| |||||||| ||||| | ||| | | | |||||| Sbjct 349 TAATCCCCCTCGCGTGCTTCCGGCGTTTTTGTAACCACCTTTTTCTT------TTTCGCC 296 Query 807 TTCGGGTGCTCCAGTGCGCGCAGGTGtttttctttctttttgcgtttcagttttaccttc 866 || |||||||| |||||||||||||||||| | |||||||| | |||||||| Sbjct 295 GCCGTGTGCTCCAAGGCGCGCAGGTGTTTTTCTCGCGGCTTGCGTTTGACCTTTACCTT- 237 Query 867 tgcttttGCGGCTTCGGGTCTTTGGTGTGTAACCACTTTGCCGTTACGCCGGTATAGGCT 926 || ||||||||| ||| |||| || | ||| | ||||| ||||||||||| || Sbjct 236 -----TTTCGGCTTCGGATCTCTGGTATGCAGCCAGCTGGCCGTCACGCCGGTATATGCG 182 Query 927 CCACGGTCAGCAATCGCAAAATGA-TGACGGTCGCCGTCGCTG-CGGGTGATGGTAATCT 984 || |||||||| || || || | || ||||| ||||| ||| || || || || | || Sbjct 181 CCCCGGTCAGCGAT-GCTGAAGGTGTGGCGGTCACCGTC-CTGTCGTGTAATCGTCAGCT 124 Query 985 GCGGGAtttttttACCGCTGGCCGTCACCCCCTGCCCCGCTTTGAGAAACAGCAG 1039 | || || ||||||||||||||| || || ||||| ||||||||||| Sbjct 123 GTGGAATGGGTTTACCGCTGGCCGTGACGCCGCTCCCCGGACGCAGAAACAGCAG 69 >seq4801 Length=500 Score = 80.6 bits (88), Expect = 6e-11 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 31405 CGGACAAATAGCCCCGGCGCTCGCGCACATTGGGCAAGACTCAACAACCTTGCACCACTC 31464 ||| || || | ||||| ||||| ||| |||||||||| ||||||||| ||| ||||| Sbjct 127 CGGGCAGATTGAACCGGCTCTCGCACACTTTGGGCAAGATGCAACAACCTCGCAGCACTC 68 Query 31465 AGACCAAAAGACTGGCTGACGATT 31488 |||||||||||||| | || ||| Sbjct 67 CGACCAAAAGACTGGTTAACAATT 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104427338602686