Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_028896.1
Length=32675
Score E
Sequences producing significant alignments: (Bits) Value
seq1378 196 1e-45
seq4801 80.6 6e-11
>seq1378
Length=479
Score = 196 bits (216), Expect = 1e-45
Identities = 295/415 (71%), Gaps = 16/415 (4%)
Strand=Plus/Minus
Query 627 GAGAACTCCGCAACGCCCCGTTGCAGTTTATCCCACTTCGCCTGAGCGGCGCGCATGGCC 686
|| ||||| ||||| ||||| ||||| || ||||| || |||| ||||||||||| ||
Sbjct 469 GAAAACTCAGCAACACCCCGCTGCAGCTTGTCCCATTTGGCCTTTGCGGCGCGCATCGCG 410
Query 687 TGCGCTTTCGTGGCATATACCGTGGTCAGGGCAAAAACATTGTCAGCCTCACCGGCCATA 746
||||| |||| || ||||||| ||| ||| || || || | |||||| |
Sbjct 409 GCGGCTTTGATGGCGTAAACCGTGGGCAGCATAAACACGTTATCTTCGGTGGCGGCCAGA 350
Query 747 TATTCACCTTCGCGCGCTTCCGGTACTTTTGGCTCTTTCTTCTGCCTGACCGGTTTCGCT 806
|| || || ||||| |||||||| ||||| | ||| | | | ||||||
Sbjct 349 TAATCCCCCTCGCGTGCTTCCGGCGTTTTTGTAACCACCTTTTTCTT------TTTCGCC 296
Query 807 TTCGGGTGCTCCAGTGCGCGCAGGTGtttttctttctttttgcgtttcagttttaccttc 866
|| |||||||| |||||||||||||||||| | |||||||| | ||||||||
Sbjct 295 GCCGTGTGCTCCAAGGCGCGCAGGTGTTTTTCTCGCGGCTTGCGTTTGACCTTTACCTT- 237
Query 867 tgcttttGCGGCTTCGGGTCTTTGGTGTGTAACCACTTTGCCGTTACGCCGGTATAGGCT 926
|| ||||||||| ||| |||| || | ||| | ||||| ||||||||||| ||
Sbjct 236 -----TTTCGGCTTCGGATCTCTGGTATGCAGCCAGCTGGCCGTCACGCCGGTATATGCG 182
Query 927 CCACGGTCAGCAATCGCAAAATGA-TGACGGTCGCCGTCGCTG-CGGGTGATGGTAATCT 984
|| |||||||| || || || | || ||||| ||||| ||| || || || || | ||
Sbjct 181 CCCCGGTCAGCGAT-GCTGAAGGTGTGGCGGTCACCGTC-CTGTCGTGTAATCGTCAGCT 124
Query 985 GCGGGAtttttttACCGCTGGCCGTCACCCCCTGCCCCGCTTTGAGAAACAGCAG 1039
| || || ||||||||||||||| || || ||||| |||||||||||
Sbjct 123 GTGGAATGGGTTTACCGCTGGCCGTGACGCCGCTCCCCGGACGCAGAAACAGCAG 69
>seq4801
Length=500
Score = 80.6 bits (88), Expect = 6e-11
Identities = 68/84 (81%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 31405 CGGACAAATAGCCCCGGCGCTCGCGCACATTGGGCAAGACTCAACAACCTTGCACCACTC 31464
||| || || | ||||| ||||| ||| |||||||||| ||||||||| ||| |||||
Sbjct 127 CGGGCAGATTGAACCGGCTCTCGCACACTTTGGGCAAGATGCAACAACCTCGCAGCACTC 68
Query 31465 AGACCAAAAGACTGGCTGACGATT 31488
|||||||||||||| | || |||
Sbjct 67 CGACCAAAAGACTGGTTAACAATT 44
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 104427338602686
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |