Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_028943.1
Length=29237
Score E
Sequences producing significant alignments: (Bits) Value
seq1378 199 7e-47
seq4801 84.2 4e-12
>seq1378
Length=479
Score = 199 bits (220), Expect = 7e-47
Identities = 296/415 (71%), Gaps = 16/415 (4%)
Strand=Plus/Plus
Query 28200 CTGCTGTTTCTCAAAGCGGGGCAGGGGGTGACGGCCAGCGGTaaaaaaaTCCCGCAGATC 28259
||||||||||| ||||| || || ||||||||||||||| || || ||| |
Sbjct 69 CTGCTGTTTCTGCGTCCGGGGAGCGGCGTCACGGCCAGCGGTAAACCCATTCCACAGCTG 128
Query 28260 ACCATCACCCG-CAGCGACGGTGACCGTCA-TCATTTTGCGATTGCTGACCGTGGAGCCT 28317
|| || || || ||| ||||||||||| || | || || || |||||||| || || |
Sbjct 129 ACGATTACACGACAG-GACGGTGACCGCCACACCTTCAGC-ATCGCTGACCGGGGCGCAT 186
Query 28318 ATACCGGCGTAACGGCAAAGTGGCTTCACACCAAAGACCCGAAGCCGCAAAAGCAGAAGG 28377
|||||||||| ||||| | ||||| || |||| ||| ||||||||| || ||||
Sbjct 187 ATACCGGCGTGACGGCCAGCTGGCTGCATACCAGAGATCCGAAGCCGAAA------AAGG 240
Query 28378 TAAAACTGAAACGCAAAAAGAAAGAGAAACACCTGCGCGCACTGGAGCACCCGAAAGCGA 28437
|||| | |||||||| | ||| |||||||||||||| |||||||| || ||||
Sbjct 241 TAAAGGTCAAACGCAAGCCGCGAGAAAAACACCTGCGCGCCTTGGAGCACACGGCGGCGA 300
Query 28438 AACCAGTCACGCAGAAGAAAGCGCCAAAAGTACCGGAAGCGCGCGAAGGTGAATACATGG 28497
|| | | | ||| | ||||| |||||||| ||||| || || || |||
Sbjct 301 AA------AAGAAAAAGGTGGTTACAAAAACGCCGGAAGCACGCGAGGGGGATTATCTGG 354
Query 28498 CCGGTGAGGCTGACAACGTTTTTGCCCTGACCACGGTATATGCCACGAAAGCGCAGGCCA 28557
||| | || ||||| ||| ||| ||||||| || |||| ||||| || |
Sbjct 355 CCGCCACCGAAGATAACGTGTTTATGCTGCCCACGGTTTACGCCATCAAAGCCGCCGCGA 414
Query 28558 TGCGCGCCGCTCAGGCGAAGTGGGATAAGCTGCAACGGGGCGTGGCGGAGTTCTC 28612
|||||||||| |||| || ||||| |||||||| ||||| || || ||||| ||
Sbjct 415 TGCGCGCCGCAAAGGCCAAATGGGACAAGCTGCAGCGGGGTGTTGCTGAGTTTTC 469
>seq4801
Length=500
Score = 84.2 bits (92), Expect = 4e-12
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 1188 AATCGTCAGCCAGTCTTCTGGTCTGAGTGGTGCAAGGTTGTTGAGTCTTGCCCAATGTGT 1247
||| || | |||||||| ||||| ||||| ||| ||||||||| |||||||||| ||||
Sbjct 44 AATTGTTAACCAGTCTTTTGGTCGGAGTGCTGCGAGGTTGTTGCATCTTGCCCAAAGTGT 103
Query 1248 GCGAGAGCCGG 1258
|||||||||||
Sbjct 104 GCGAGAGCCGG 114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 93426903816522
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |