Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_028955.1
Length=197361
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 513 2e-140
seq7307 260 2e-64
seq7678 251 9e-62
seq5149 165 1e-35
seq7318 129 7e-25
seq5922 91.5 2e-13
seq6299 82.4 1e-10
>seq8857
Length=8770
Score = 513 bits (568), Expect = 2e-140
Identities = 643/882 (73%), Gaps = 0/882 (0%)
Strand=Plus/Minus
Query 189767 GCATTTATTGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTTCA 189826
|| || ||||| || || || ||||| |||||||| || | || || ||| | || ||
Sbjct 6328 GCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCT 6269
Query 189827 CTTCTCTATGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTGGT 189886
| || || || ||||| || || || ||||| || | ||| | || ||||| |||
Sbjct 6268 TTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGT 6209
Query 189887 CTACACTTCTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATGGTGGT 189946
| ||||| || ||||| |||||||| ||| | || ||||| ||| | ||||||||||||
Sbjct 6208 TTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGT 6149
Query 189947 CCTTACCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGACAG 190006
||||| || | | | | |||||| | | ||| | | |||||||| | ||
Sbjct 6148 CCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAG 6089
Query 190007 TGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCA 190066
|||||| | | | | || |||||| | |||||||| |||||| |||||||| ||
Sbjct 6088 TGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCT 6029
Query 190067 GTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGAT 190126
|| | || || ||| || ||| | | |||||| ||||||| || || ||||||
Sbjct 6028 GTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGAT 5969
Query 190127 GGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAACAT 190186
||||||||| |||| || || ||||| |||||||| ||| |||||||||| || |||||
Sbjct 5968 GGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACAC 5909
Query 190187 AATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTA 190246
|| ||||||||||||||||| || ||| ||||||||| ||| | |||||||| | ||
Sbjct 5908 AACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTA 5849
Query 190247 TTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTA 190306
|| ||| ||||||||||| | ||||| ||| | | ||||| ||||| || |
Sbjct 5848 TTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAAT 5789
Query 190307 GAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCT 190366
|| || || | |||||||| || || ||||| |||||||| || || || ||||||
Sbjct 5788 GAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCT 5729
Query 190367 GCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGT 190426
||||||||||| ||||| || | |||||||| ||||| ||||||||||| | |
Sbjct 5728 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCT 5669
Query 190427 TTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTATT 190486
||||| ||||||||||| | | || || | | || | ||||| || | | ||||||
Sbjct 5668 TTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATT 5609
Query 190487 TGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAA 190546
| || ||||| ||||| |||||||||||||| || || || |||||||||||| |||
Sbjct 5608 AGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAA 5549
Query 190547 GGTAAAATTGTTCCAACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTA 190606
||| | || || || | ||| | ||||| | || |||||||||||||||||
Sbjct 5548 GGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTT 5489
Query 190607 ATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCT 190648
||||||||| | ||||| || |||||||| ||||||||||||
Sbjct 5488 ATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCT 5447
>seq7307
Length=548
Score = 260 bits (288), Expect = 2e-64
Identities = 354/497 (71%), Gaps = 25/497 (5%)
Strand=Plus/Plus
Query 191340 TCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCCATTCATGGTG 191399
|||||||||||||||| || ||| | || |||||||| || | ||||||||||| || |
Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60
Query 191400 CTACAGTACAGAACACCTTGTATGAGGAC--TCAAGCATCTATACAGATGGTCAAGTTCA 191457
| |||||| | |||||||| | ||| ||| | ||||||| ||
Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATC------------------CA 102
Query 191458 AAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTCTATGATCAC 191517
|| ||||| | || || | || || | || ||||| || || ||| | ||
Sbjct 103 AA-----ACCTTCCGCGCCTTCAACTACACCCAAGCAGAAGAAACCTACTCCATGGTGAC 157
Query 191518 TGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAGATTTCTACA 191577
|| ||| ||||||||||||||||||| ||||| || ||||| |||||| | | ||||
Sbjct 158 AGCGAACCGATTCTGGTCACAGATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACA 217
Query 191578 CTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGGTATTGTAGG 191637
|||||| ||| ||||||| || || | || |||||| | ||| |||| || || ||
Sbjct 218 CTTCTTCATGCTGTTTGTACCAGTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGG 277
Query 191638 TCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGCAGCAGAAGA 191697
| | ||| | ||| | | || || || || ||||| ||||| | | |||||||||||
Sbjct 278 TTTAGCATTGAACCTCCGGGCTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGA 337
Query 191698 CCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATG 191757
|||||| |||||||| |||||||| || |||||| | || || || ||||| | || ||
Sbjct 338 CCCAGAATTTGAAACATTCTATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTG 397
Query 191758 GATGTCTTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTACCTAG 191817
|||| || | ||| || ||||| || | ||||| ||||||||||| ||||||||| |
Sbjct 398 GATGGCTCCTCAAGATCAGCCTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCG 457
Query 191818 AGGAAATGCATTGTAAT 191834
|| || || | ||||
Sbjct 458 TGGTAACGCTCTCTAAT 474
>seq7678
Length=557
Score = 251 bits (278), Expect = 9e-62
Identities = 288/386 (75%), Gaps = 6/386 (2%)
Strand=Plus/Minus
Query 190307 GAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCT 190366
|| ||||| ||||| ||||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct 503 GAATCACAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCT 444
Query 190367 GCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGT 190426
|| || |||||||||||| | | |||||||| || ||||| ||||||||| || ||
Sbjct 443 GCACACGGTTACTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAAC---AGCCGT 387
Query 190427 TTAC---ACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGT 190483
| || |||||||||| || | || || |||| | || | ||||| || | | |||
Sbjct 386 TCACTGCACTTCTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGT 327
Query 190484 ATTTGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCA 190543
|| |||||||||| |||||| | || || |||||||| ||||| || ||| | ||| |
Sbjct 326 ATCAGCACAATGGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCT 267
Query 190544 CAAGGTAAAATTGTTCCAACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAA 190603
|||||| | | | || |||| || || | ||| | || ||| | |||||||||
Sbjct 266 CAAGGTCGCGTCATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAA 207
Query 190604 GTAATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCTTGTGCTGAGTCTACA 190663
|| ||||| || | || || ||||||||||| ||||| | ||| || ||| | |
Sbjct 206 GTCATGCACGAGCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCT 147
Query 190664 ACAGTTGCTTTAACAGCACCTGCAAT 190689
| || |||||||| |||||||||||
Sbjct 146 CCTGTGGCTTTAACTGCACCTGCAAT 121
>seq5149
Length=487
Score = 165 bits (182), Expect = 1e-35
Identities = 247/348 (71%), Gaps = 2/348 (1%)
Strand=Plus/Plus
Query 188698 ATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTATT 188757
|| |||| | ||||| ||||||| || | |||||||| |||| || |||||| |||
Sbjct 19 ATTCACTTTAAGTTTTATAAATGGATCGTCTGTGAAGTTTGTGCGAGGTTTTGTCTCATT 78
Query 188758 AATTTACCTGTAGTTGATTGGGTAATGAATAAA-CAAACTAAGAAGAAGGAACTTAGAAA 188816
| |||||||| | |||| || | | ||||| | ||| || |||| | || | |
Sbjct 79 TACCTACCTGTACTAGATTTGGAACTTGATAAAGCTAACAAA-AAGACACAGCTCAAGCA 137
Query 188817 TTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCCAAC 188876
|| ||| |||||| | ||| ||| |||| || || ||||| ||||| || || ||
Sbjct 138 CTACATGATTTTCTTTGGCGTTTGTATTATCTGCGGTAACTGTGTGGAATATTGCCCGAC 197
Query 188877 TAACTGTCTATCCATGACAGAAGAGTATGAACTATCTGTTTTTGACAGACATCAACTCAA 188936
||||||| |||| ||||||||||| ||||| ||||| | | || | ||| || | ||
Sbjct 198 TAACTGTTTATCGATGACAGAAGAATATGAGCTATCCGCCTAAGATCGCCATGAATTGAA 257
Query 188937 CTATGATAATGTAGCTCTTGGTAGATTACCTACCAATGTCACAAGTGATCCTTCAGTGAG 188996
||| ||||| ||||| |||||| | | ||| ||| || |||| ||| || ||||
Sbjct 258 CTACGATAACGTAGCACTTGGTCGTCTGCCTTACAAAGTTACAAATGACCCAATGGTGAC 317
Query 188997 ATCACTAAGAGAACTAACCTACCTACCCAAAGGTGAGATGGATCCTCA 189044
| || | | |||||| ||| ||||||| |||| |||||||| ||
Sbjct 318 ACCATTGCGCGAACTAGTTTACTTACCCAAGGGTGTCATGGATCCCCA 365
>seq7318
Length=447
Score = 129 bits (142), Expect = 7e-25
Identities = 235/348 (68%), Gaps = 21/348 (6%)
Strand=Plus/Plus
Query 191177 AATGCTCTTGCTTTTTCTGCTGTCATAGCAGTTTTCACAAGTGTATTCTTAATCTATCCA 191236
||||| | || ||||||| | || || ||||| |||||| |||| ||||||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 191237 CTTGGTCAGCACAGTTGGTTCTTTGCACCTTCATTTGGAGTTGCAGCAATCTTTAGATAT 191296
|| |||||| ||||||| ||||| ||| ||||| || ||||| || ||| | |
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 191297 ATTCTATTCATTCAAGGTTTCCACAATATTACACTCAACCCTTTCCACATGATGGGAGTT 191356
|| ||||| ||||||| || || ||| || | ||||| || || ||||||||||||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 191357 GCAGGTATTCTAGGTGGAGCATTACTATGTGCCATTCATGGTGCTACAGTACAGAACACC 191416
|| ||| | | || | || | ||||| || ||||||||||| || ||| | || ||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 191417 TTGTATGAGGACTCAAGCATCTATACAGATGGTCAAGTTCAAAGTACAACCTTTAGAGCA 191476
|| | ||| ||||||| | | | || |||| || | ||
Sbjct 241 TTATTTGA------------------AGATGGTGATGGTGCAAATACA---TTCCGGGCT 279
Query 191477 TTTGATCCAACACAGGATGAGGAAACTTATTCTATGATCACTGCAAAC 191524
||| | ||||| || | ||| ||||||||||| ||| ||||||| |||
Sbjct 280 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAAC 327
>seq5922
Length=459
Score = 91.5 bits (100), Expect = 2e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 183881 TATGCAATGCCACCTTATCCATATCTTGGTATTGAATATCCAACAGTAGTAGGATTATTC 183940
||| | ||||| |||||||||||||| | || ||| ||| || | | ||| ||
Sbjct 459 TATTCCATGCCCCCTTATCCATATCTAGCTACTGACTATGGTACCCAACTGTCATTGTTT 400
Query 183941 ACCCATCATATGTGGATAGGTGGTTTTCTTATTGTGGGTGCATCAGCACATGCTTCAATT 184000
|| ||||| |||||||| ||||| ||||| || || ||||| | || |||||| | |||
Sbjct 399 ACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCCCATGCTGCTATT 340
Query 184001 GCTATGATAAGAGACTATAATCC 184023
|||| ||||||| ||| ||||
Sbjct 339 TTTATGGTAAGAGATTATGATCC 317
>seq6299
Length=447
Score = 82.4 bits (90), Expect = 1e-10
Identities = 254/387 (66%), Gaps = 12/387 (3%)
Strand=Plus/Plus
Query 185308 TCCTGTGAACAGATTG--TATTCTGGACTGTATCATTGGTGGTACACAGTTGGTATGAGA 185365
|||||| |||| ||| || ||||| | || || |||||||| || | |||||| |
Sbjct 25 TCCTGTAAACA--TTGCTTACTCTGGTGTTTACCACTGGTGGTATACCATCGGTATGCGG 82
Query 185366 ACTAATATGCAACTGTATACTGGTGGTGCATTTATGATTCTACTAGCATTGGTATCTTTA 185425
|| || | ||||||| || ||| || || | |||| | ||| ||| |||
Sbjct 83 ACGAACAGTGAACTGTACACCGGTTCTGTGTTCCTCCTTCTGTTGGCAGCATTATTCTTA 142
Query 185426 CTTGGTGCTCAATTACATCTGAAACCAAAGTTTGCACCTAAGCTTGCTTGGTTTAAAGAT 185485
||| || | || || | |||| ||||| |||| || |||||||||| |
Sbjct 143 TTTGCTGGTTGGTTGCACTTACAACCCAAGTTCCGTCCTAGCCTCTCTTGGTTTAAGAGT 202
Query 185486 AATGAGAACAGATTAAATCATCATCTATCAGTTCTATTTGGATTCAGTTCTATTGCATGG 185545
||| | | |||| ||||| ||| | | | | || || | || || | || |||
Sbjct 203 GCTGAACCCCGTCTAAACCATCACCTAGCTGGTTTGTTCGGTGTTAGCTCCTTGGCTTGG 262
Query 185546 GCTGGTCATTTGATACACGTAGCAATACCTGCATCAAGAGGA-ATCACTGTAGATTGGAC 185604
|||||||| ||||| |||| || || || | ||| | ||| | ||| || | ||||
Sbjct 263 GCTGGTCACTTGATTTACGTTGCCATCCCCGAATCTCGCGGACAGCAC-GTTGGTTGGGA 321
Query 185605 TAATTATGTGTTTATGAAA---CCTCATCCTGCAGGTTTACTGCCATTCTTTACAGGAAA 185661
||| | | || | | | || || || |||||||| || ||||| ||||| ||
Sbjct 322 TAACT---TCTTAACCACATTGCCCCACCCAGCAGGTTTGACACCCTTCTTCACAGGTAA 378
Query 185662 CTGGGGTGTTTATGCACAAAATCCTGA 185688
|||||| ||||| || || || |||||
Sbjct 379 CTGGGGCGTTTACGCTCAGAACCCTGA 405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 631356803760040
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