Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq8857 513 2e-140 seq7307 260 2e-64 seq7678 251 9e-62 seq5149 165 1e-35 seq7318 129 7e-25 seq5922 91.5 2e-13 seq6299 82.4 1e-10 >seq8857 Length=8770 Score = 513 bits (568), Expect = 2e-140 Identities = 643/882 (73%), Gaps = 0/882 (0%) Strand=Plus/Minus Query 189767 GCATTTATTGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTTCA 189826 || || ||||| || || || ||||| |||||||| || | || || ||| | || || Sbjct 6328 GCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCT 6269 Query 189827 CTTCTCTATGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTGGT 189886 | || || || ||||| || || || ||||| || | ||| | || ||||| ||| Sbjct 6268 TTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGT 6209 Query 189887 CTACACTTCTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATGGTGGT 189946 | ||||| || ||||| |||||||| ||| | || ||||| ||| | |||||||||||| Sbjct 6208 TTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGT 6149 Query 189947 CCTTACCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGACAG 190006 ||||| || | | | | |||||| | | ||| | | |||||||| | || Sbjct 6148 CCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAG 6089 Query 190007 TGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCA 190066 |||||| | | | | || |||||| | |||||||| |||||| |||||||| || Sbjct 6088 TGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCT 6029 Query 190067 GTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGAT 190126 || | || || ||| || ||| | | |||||| ||||||| || || |||||| Sbjct 6028 GTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGAT 5969 Query 190127 GGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAACAT 190186 ||||||||| |||| || || ||||| |||||||| ||| |||||||||| || ||||| Sbjct 5968 GGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACAC 5909 Query 190187 AATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTA 190246 || ||||||||||||||||| || ||| ||||||||| ||| | |||||||| | || Sbjct 5908 AACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTA 5849 Query 190247 TTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTA 190306 || ||| ||||||||||| | ||||| ||| | | ||||| ||||| || | Sbjct 5848 TTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAAT 5789 Query 190307 GAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCT 190366 || || || | |||||||| || || ||||| |||||||| || || || |||||| Sbjct 5788 GAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCT 5729 Query 190367 GCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGT 190426 ||||||||||| ||||| || | |||||||| ||||| ||||||||||| | | Sbjct 5728 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCT 5669 Query 190427 TTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTATT 190486 ||||| ||||||||||| | | || || | | || | ||||| || | | |||||| Sbjct 5668 TTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATT 5609 Query 190487 TGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAA 190546 | || ||||| ||||| |||||||||||||| || || || |||||||||||| ||| Sbjct 5608 AGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAA 5549 Query 190547 GGTAAAATTGTTCCAACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTA 190606 ||| | || || || | ||| | ||||| | || ||||||||||||||||| Sbjct 5548 GGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTT 5489 Query 190607 ATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCT 190648 ||||||||| | ||||| || |||||||| |||||||||||| Sbjct 5488 ATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCT 5447 >seq7307 Length=548 Score = 260 bits (288), Expect = 2e-64 Identities = 354/497 (71%), Gaps = 25/497 (5%) Strand=Plus/Plus Query 191340 TCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCCATTCATGGTG 191399 |||||||||||||||| || ||| | || |||||||| || | ||||||||||| || | Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 191400 CTACAGTACAGAACACCTTGTATGAGGAC--TCAAGCATCTATACAGATGGTCAAGTTCA 191457 | |||||| | |||||||| | ||| ||| | ||||||| || Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATC------------------CA 102 Query 191458 AAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTCTATGATCAC 191517 || ||||| | || || | || || | || ||||| || || ||| | || Sbjct 103 AA-----ACCTTCCGCGCCTTCAACTACACCCAAGCAGAAGAAACCTACTCCATGGTGAC 157 Query 191518 TGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAGATTTCTACA 191577 || ||| ||||||||||||||||||| ||||| || ||||| |||||| | | |||| Sbjct 158 AGCGAACCGATTCTGGTCACAGATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACA 217 Query 191578 CTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGGTATTGTAGG 191637 |||||| ||| ||||||| || || | || |||||| | ||| |||| || || || Sbjct 218 CTTCTTCATGCTGTTTGTACCAGTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGG 277 Query 191638 TCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGCAGCAGAAGA 191697 | | ||| | ||| | | || || || || ||||| ||||| | | ||||||||||| Sbjct 278 TTTAGCATTGAACCTCCGGGCTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGA 337 Query 191698 CCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATG 191757 |||||| |||||||| |||||||| || |||||| | || || || ||||| | || || Sbjct 338 CCCAGAATTTGAAACATTCTATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTG 397 Query 191758 GATGTCTTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTACCTAG 191817 |||| || | ||| || ||||| || | ||||| ||||||||||| ||||||||| | Sbjct 398 GATGGCTCCTCAAGATCAGCCTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCG 457 Query 191818 AGGAAATGCATTGTAAT 191834 || || || | |||| Sbjct 458 TGGTAACGCTCTCTAAT 474 >seq7678 Length=557 Score = 251 bits (278), Expect = 9e-62 Identities = 288/386 (75%), Gaps = 6/386 (2%) Strand=Plus/Minus Query 190307 GAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCT 190366 || ||||| ||||| ||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct 503 GAATCACAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCT 444 Query 190367 GCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGT 190426 || || |||||||||||| | | |||||||| || ||||| ||||||||| || || Sbjct 443 GCACACGGTTACTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAAC---AGCCGT 387 Query 190427 TTAC---ACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGT 190483 | || |||||||||| || | || || |||| | || | ||||| || | | ||| Sbjct 386 TCACTGCACTTCTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGT 327 Query 190484 ATTTGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCA 190543 || |||||||||| |||||| | || || |||||||| ||||| || ||| | ||| | Sbjct 326 ATCAGCACAATGGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCT 267 Query 190544 CAAGGTAAAATTGTTCCAACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAA 190603 |||||| | | | || |||| || || | ||| | || ||| | ||||||||| Sbjct 266 CAAGGTCGCGTCATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAA 207 Query 190604 GTAATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCTTGTGCTGAGTCTACA 190663 || ||||| || | || || ||||||||||| ||||| | ||| || ||| | | Sbjct 206 GTCATGCACGAGCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCT 147 Query 190664 ACAGTTGCTTTAACAGCACCTGCAAT 190689 | || |||||||| ||||||||||| Sbjct 146 CCTGTGGCTTTAACTGCACCTGCAAT 121 >seq5149 Length=487 Score = 165 bits (182), Expect = 1e-35 Identities = 247/348 (71%), Gaps = 2/348 (1%) Strand=Plus/Plus Query 188698 ATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTATT 188757 || |||| | ||||| ||||||| || | |||||||| |||| || |||||| ||| Sbjct 19 ATTCACTTTAAGTTTTATAAATGGATCGTCTGTGAAGTTTGTGCGAGGTTTTGTCTCATT 78 Query 188758 AATTTACCTGTAGTTGATTGGGTAATGAATAAA-CAAACTAAGAAGAAGGAACTTAGAAA 188816 | |||||||| | |||| || | | ||||| | ||| || |||| | || | | Sbjct 79 TACCTACCTGTACTAGATTTGGAACTTGATAAAGCTAACAAA-AAGACACAGCTCAAGCA 137 Query 188817 TTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCCAAC 188876 || ||| |||||| | ||| ||| |||| || || ||||| ||||| || || || Sbjct 138 CTACATGATTTTCTTTGGCGTTTGTATTATCTGCGGTAACTGTGTGGAATATTGCCCGAC 197 Query 188877 TAACTGTCTATCCATGACAGAAGAGTATGAACTATCTGTTTTTGACAGACATCAACTCAA 188936 ||||||| |||| ||||||||||| ||||| ||||| | | || | ||| || | || Sbjct 198 TAACTGTTTATCGATGACAGAAGAATATGAGCTATCCGCCTAAGATCGCCATGAATTGAA 257 Query 188937 CTATGATAATGTAGCTCTTGGTAGATTACCTACCAATGTCACAAGTGATCCTTCAGTGAG 188996 ||| ||||| ||||| |||||| | | ||| ||| || |||| ||| || |||| Sbjct 258 CTACGATAACGTAGCACTTGGTCGTCTGCCTTACAAAGTTACAAATGACCCAATGGTGAC 317 Query 188997 ATCACTAAGAGAACTAACCTACCTACCCAAAGGTGAGATGGATCCTCA 189044 | || | | |||||| ||| ||||||| |||| |||||||| || Sbjct 318 ACCATTGCGCGAACTAGTTTACTTACCCAAGGGTGTCATGGATCCCCA 365 >seq7318 Length=447 Score = 129 bits (142), Expect = 7e-25 Identities = 235/348 (68%), Gaps = 21/348 (6%) Strand=Plus/Plus Query 191177 AATGCTCTTGCTTTTTCTGCTGTCATAGCAGTTTTCACAAGTGTATTCTTAATCTATCCA 191236 ||||| | || ||||||| | || || ||||| |||||| |||| |||||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 191237 CTTGGTCAGCACAGTTGGTTCTTTGCACCTTCATTTGGAGTTGCAGCAATCTTTAGATAT 191296 || |||||| ||||||| ||||| ||| ||||| || ||||| || ||| | | Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 191297 ATTCTATTCATTCAAGGTTTCCACAATATTACACTCAACCCTTTCCACATGATGGGAGTT 191356 || ||||| ||||||| || || ||| || | ||||| || || |||||||||||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 191357 GCAGGTATTCTAGGTGGAGCATTACTATGTGCCATTCATGGTGCTACAGTACAGAACACC 191416 || ||| | | || | || | ||||| || ||||||||||| || ||| | || || Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 191417 TTGTATGAGGACTCAAGCATCTATACAGATGGTCAAGTTCAAAGTACAACCTTTAGAGCA 191476 || | ||| ||||||| | | | || |||| || | || Sbjct 241 TTATTTGA------------------AGATGGTGATGGTGCAAATACA---TTCCGGGCT 279 Query 191477 TTTGATCCAACACAGGATGAGGAAACTTATTCTATGATCACTGCAAAC 191524 ||| | ||||| || | ||| ||||||||||| ||| ||||||| ||| Sbjct 280 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAAC 327 >seq5922 Length=459 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 183881 TATGCAATGCCACCTTATCCATATCTTGGTATTGAATATCCAACAGTAGTAGGATTATTC 183940 ||| | ||||| |||||||||||||| | || ||| ||| || | | ||| || Sbjct 459 TATTCCATGCCCCCTTATCCATATCTAGCTACTGACTATGGTACCCAACTGTCATTGTTT 400 Query 183941 ACCCATCATATGTGGATAGGTGGTTTTCTTATTGTGGGTGCATCAGCACATGCTTCAATT 184000 || ||||| |||||||| ||||| ||||| || || ||||| | || |||||| | ||| Sbjct 399 ACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCCCATGCTGCTATT 340 Query 184001 GCTATGATAAGAGACTATAATCC 184023 |||| ||||||| ||| |||| Sbjct 339 TTTATGGTAAGAGATTATGATCC 317 >seq6299 Length=447 Score = 82.4 bits (90), Expect = 1e-10 Identities = 254/387 (66%), Gaps = 12/387 (3%) Strand=Plus/Plus Query 185308 TCCTGTGAACAGATTG--TATTCTGGACTGTATCATTGGTGGTACACAGTTGGTATGAGA 185365 |||||| |||| ||| || ||||| | || || |||||||| || | |||||| | Sbjct 25 TCCTGTAAACA--TTGCTTACTCTGGTGTTTACCACTGGTGGTATACCATCGGTATGCGG 82 Query 185366 ACTAATATGCAACTGTATACTGGTGGTGCATTTATGATTCTACTAGCATTGGTATCTTTA 185425 || || | ||||||| || ||| || || | |||| | ||| ||| ||| Sbjct 83 ACGAACAGTGAACTGTACACCGGTTCTGTGTTCCTCCTTCTGTTGGCAGCATTATTCTTA 142 Query 185426 CTTGGTGCTCAATTACATCTGAAACCAAAGTTTGCACCTAAGCTTGCTTGGTTTAAAGAT 185485 ||| || | || || | |||| ||||| |||| || |||||||||| | Sbjct 143 TTTGCTGGTTGGTTGCACTTACAACCCAAGTTCCGTCCTAGCCTCTCTTGGTTTAAGAGT 202 Query 185486 AATGAGAACAGATTAAATCATCATCTATCAGTTCTATTTGGATTCAGTTCTATTGCATGG 185545 ||| | | |||| ||||| ||| | | | | || || | || || | || ||| Sbjct 203 GCTGAACCCCGTCTAAACCATCACCTAGCTGGTTTGTTCGGTGTTAGCTCCTTGGCTTGG 262 Query 185546 GCTGGTCATTTGATACACGTAGCAATACCTGCATCAAGAGGA-ATCACTGTAGATTGGAC 185604 |||||||| ||||| |||| || || || | ||| | ||| | ||| || | |||| Sbjct 263 GCTGGTCACTTGATTTACGTTGCCATCCCCGAATCTCGCGGACAGCAC-GTTGGTTGGGA 321 Query 185605 TAATTATGTGTTTATGAAA---CCTCATCCTGCAGGTTTACTGCCATTCTTTACAGGAAA 185661 ||| | | || | | | || || || |||||||| || ||||| ||||| || Sbjct 322 TAACT---TCTTAACCACATTGCCCCACCCAGCAGGTTTGACACCCTTCTTCACAGGTAA 378 Query 185662 CTGGGGTGTTTATGCACAAAATCCTGA 185688 |||||| ||||| || || || ||||| Sbjct 379 CTGGGGCGTTTACGCTCAGAACCCTGA 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631356803760040