Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_029002.1 Length=169223 Score E Sequences producing significant alignments: (Bits) Value seq920 118 1e-21 >seq920 Length=528 Score = 118 bits (130), Expect = 1e-21 Identities = 239/354 (68%), Gaps = 3/354 (1%) Strand=Plus/Plus Query 47432 TTATCATTGCCATCTTCTATCCAAGCACTGCCATCCGTTGGTGCGCCATCATAACTACCG 47491 |||||||| || || | ||| || || || || ||||| || || |||| | Sbjct 25 TTATCATT---ATTATCAAACCACGCCCTACCGTCTGTTGGCGCACCTACATAGTCGCTA 81 Query 47492 TGCCAGGTATCGGCGCACCATTCCCAGACATTGCCGTGCATATCGTAGAGTCCGAAGGCA 47551 ||||| |||| ||||||||| | || || ||||||||||||| | || ||| | Sbjct 82 TGCCAATCATCGAGACACCATTCCAAAACGTTCCCGTGCATATCGTGTAACCCAAAGCCG 141 Query 47552 TTAGGGGGAAATTGTCCCACGGGAGTCGTTTCTTCTCGATATTCTCCCTCCGCTTCCCCG 47611 ||||| | ||| || || || |||| ||| |||||||| || | | || Sbjct 142 TTAGGTGAAAAACTGCCTACTTCTGTTGTTTTTTCACGATATTCGCCTTTTGGCTCAGAA 201 Query 47612 GCGTAGGTATAGCTGGCATTGTAGTTGGCCAATTCCCCGGTAATGGTTTCCCCAAAGTAA 47671 ||||| || || || ||||||| || || || || || || || |||||||| || Sbjct 202 GCGTAAGTGTAATTGCCATTGTAATTAGCTAAATCAGTTGTTATAGTCTCCCCAAAATAT 261 Query 47672 AACGGGGTGGTAGTTCCAGCGCGACAAGCATACTCCCATTCCGCCTCACTCGGTAGCCGG 47731 ||||| || || || || || ||||| ||||| || || || || ||||| ||||| || Sbjct 262 AACGGTGTCGTTGTACCGGCACGACAGGCATATTCACAATCTGCTTCACTTGGTAGGCGA 321 Query 47732 TATTCCCTTCCGGTCAGCTTCGATAATCTCGCGCAGAACTCGACTGCATCGTAC 47785 |||||| | | || | || || | | | || |||| |||||||| ||| Sbjct 322 TATTCCTTGTCTGTATGTTTTGAAAGGCGTGAGCTATACTCAACTGCATCTTAC 375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541325242272920