Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_029003.2 Length=29733 Score E Sequences producing significant alignments: (Bits) Value seq1378 178 2e-40 >seq1378 Length=479 Score = 178 bits (196), Expect = 2e-40 Identities = 281/397 (71%), Gaps = 17/397 (4%) Strand=Plus/Plus Query 19678 ACGGCCAGCGGTAAGCCCATTCCACAAATGACGCTGACCCG-CAGTGACGGCGACCGCCA 19736 |||||||||||||| ||||||||||| ||||| | || || ||| ||||| |||||||| Sbjct 99 ACGGCCAGCGGTAAACCCATTCCACAGCTGACGATTACACGACAG-GACGGTGACCGCCA 157 Query 19737 TCAGTTTGCCATTGCCGACCGCGGAGCTTATACCGGTGTAACAGCTAAATGGTTGCACAC 19796 || ||| || ||||| || || |||||||| || || || | ||| |||| || Sbjct 158 CACCTTCAGCATCGCTGACCGGGGCGCATATACCGGCGTGACGGCCAGCTGGCTGCATAC 217 Query 19797 CAAAGACCCGAAGCCGCAAAAACAGAAAGTGACGCTGAAACGCCAGCCAAAAGAGAAGCA 19856 || ||| ||||||||| || || || | | | |||||| |||| ||| || || Sbjct 218 CAGAGATCCGAAGCCGAAA------AAGGTAAAGGTCAAACGCAAGCCGCGAGAAAAACA 271 Query 19857 CCTTCGCGCACTGGAACACCCGAAAGCAAAGCCGGTTAGCAAAAAGACGAAGTCCAGAAA 19916 ||| ||||| |||| ||| || || | || | |||||| | || | ||| Sbjct 272 CCTGCGCGCCTTGGAGCACACG---GC---GGCGAAAAAGAAAAAG--GTGGT-TACAAA 322 Query 19917 AGAGCCGGAGGCTCGCGAAGGTGAGTATATGGTCGGTGAGGCCGATAACGTGCTGGCACT 19976 | |||||| || ||||| || || ||| ||| || | ||||||||| | || Sbjct 323 AACGCCGGAAGCACGCGAGGGGGATTATCTGGCCGCCACCGAAGATAACGTGTTTATGCT 382 Query 19977 GACGACGGTCTACGCTTCCAGAGCGCAGGCGATGCGCGCCGCTCAGGCTAAGTGGGATAA 20036 | | ||||| ||||| || ||| |||||||||||||| |||| || ||||| || Sbjct 383 GCCCACGGTTTACGCCATCAAAGCCGCCGCGATGCGCGCCGCAAAGGCCAAATGGGACAA 442 Query 20037 GCTGCAGCGAGGCGTTGCGGAGTTTTCAATTACGCTG 20073 ||||||||| || ||||| |||||||| | |||||| Sbjct 443 GCTGCAGCGGGGTGTTGCTGAGTTTTCGCTGACGCTG 479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95013935711210