Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_029015.2 Length=33509 Score E Sequences producing significant alignments: (Bits) Value seq4863 114 3e-21 >seq4863 Length=526 Score = 114 bits (126), Expect = 3e-21 Identities = 165/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 26034 ACGATGAAGGCCCATCACTGGCAAGCCTGCTTAAGTACGGGTGCCAGGTCACACACTTCA 26093 ||||| | | |||||||| || |||| | | ||| | || ||||||||||| |||| | Sbjct 143 ACGATAATGCTCCATCACTTGCCAGCCGGTTAAAGCATGGTTGCCAGGTCACGCACTACC 202 Query 26094 AGAACTCACGCGGTTGGCTGGAAACACCGGACGGAAGATTTTTTAAGCCCGAACCGGCGA 26153 || ||||||| ||| | ||| |||||||| | || ||||| || |||| | | Sbjct 203 GCAATACACGCGGCTGGATTGAATGCCCGGACGGGCGTTTCTTTAAACCGGAACTGAATA 262 Query 26154 AGGTTCAATTTATCAAAGGTAAAAATAAACCGTTTATTTATATCCAAAGA--ATAAATAA 26211 |||||| ||||| ||||||| | ||| || ||| |||||| | |||| ||||| || Sbjct 263 AGGTTCGCTTTATTAAAGGTATGAGTAAGCCTTTTGTTTATA--CGAAGAAGATAAACAA 320 Query 26212 AGGCTTCCTGCTTACACTGGCTGAATTATTTAAAAAGCTAATTAAGTAATT 26262 |||||| | | | | |||| ||||||| |||||| || ||| ||| Sbjct 321 AGGCTTATTTAGTGCCTTAGCTGGGTTATTTAGAAAGCTGCTTTAGTCATT 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107095855941738